FFCP PHASE1:Hg19::chr19:16718183..16718186,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:16718183..16718186,- | |||
|id=chr19:16718183..16718186,- | |||
|ontology_enrichment_celltype=CL:0000037!8.43e-13!172;CL:0000566!8.43e-13!172;CL:0000988!2.05e-11!182;CL:0002032!7.65e-11!165;CL:0000837!7.65e-11!165;CL:0000738!1.09e-10!140;CL:0002087!1.39e-07!119;CL:0000542!1.70e-07!53;CL:0000051!1.70e-07!53;CL:0002031!2.23e-07!124;CL:0000838!3.42e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.03e-20;3!CL:0000791;1.55e-16;18!CL:0000789;1.55e-16;18!CL:0002419;1.55e-16;18!CL:0000084;4.12e-15;25!CL:0000542;1.55e-12;53!CL:0000624;2.50e-10;6!CL:0000511;1.53e-07;1!CL:0002625;1.53e-07;1!CL:0002127;1.53e-07;1!CL:0000911;1.53e-07;1!CL:0000216;1.53e-07;1!CL:0000814;1.53e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.40e-21,52;CL:0000542,1.52e-20,53;CL:0000051,1.52e-20,53;CL:0000623,3.36e-20,3;CL:0000825,3.36e-20,3;CL:0002087,1.45e-17,115;CL:0000791,1.42e-16,18;CL:0000789,1.42e-16,18;CL:0002420,1.42e-16,18;CL:0002419,1.42e-16,18;CL:0000790,1.42e-16,18;CL:0000738,5.33e-16,136;CL:0000084,4.69e-15,25;CL:0000827,4.69e-15,25;CL:0002031,7.00e-15,120;CL:0000037,1.35e-13,168;CL:0002032,6.55e-13,161;CL:0000837,6.55e-13,161;CL:0000988,1.10e-12,177;CL:0000624,1.92e-10,6;CL:0000511,9.44e-08,1;CL:0002625,9.44e-08,1;CL:0000216,9.44e-08,1;CL:0002127,3.17e-07,1;CL:0000914,3.17e-07,1;CL:0000911,3.17e-07,1;CL:0000814,3.17e-07,1;CL:0002042,3.17e-07,1;CL:0002039,3.17e-07,1;CL:0002040,3.17e-07,1;CL:0002041,3.17e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.55e-16;18!CL:0000051;1.55e-12;53!UBERON:0005425;5.95e-08;1!UBERON:0005754;1.53e-07;1 | |||
|ontology_enrichment_disease=DOID:162!3.58e-09!235;DOID:14566!7.20e-09!239;DOID:2531!2.56e-07!51;DOID:0060083!2.56e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.95e-08;1!UBERON:0001785;5.95e-08;1!UBERON:0002464;5.95e-08;1!UBERON:0004904;5.95e-08;1!UBERON:0001021;5.95e-08;1!UBERON:0000998;1.53e-07;1!UBERON:0001136;1.53e-07;1!UBERON:0001343;1.53e-07;1!UBERON:0006868;1.53e-07;1!UBERON:0004910;1.53e-07;1!UBERON:0004813;1.53e-07;1!UBERON:0005904;3.94e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.96e-08,1;UBERON:0001785,5.96e-08,1;UBERON:0002464,5.96e-08,1;UBERON:0004904,5.96e-08,1;UBERON:0001021,5.96e-08,1;UBERON:0003902,5.96e-08,1;UBERON:0005425,5.96e-08,1;UBERON:0000998,8.84e-08,1;UBERON:0006868,8.84e-08,1;UBERON:0001136,9.44e-08,1;UBERON:0001343,9.44e-08,1;UBERON:0004910,9.44e-08,1;UBERON:0005154,9.44e-08,1;UBERON:0005295,9.44e-08,1;UBERON:0004813,9.44e-08,1;UBERON:0005297,9.44e-08,1;UBERON:0005294,9.44e-08,1;UBERON:0010141,9.44e-08,1;UBERON:0005891,9.44e-08,1;UBERON:0005904,2.40e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.382067028739756,0.246301768349837,0.157421562627358,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0.369754010166788,0.619737604642413,1.13735385989937,0,1.10799081706375,1.40381113229099,0.217010870715852,0.223915474239924,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0.464858073811369,0,0,0.863077176966451,0.512321413058201,0.236482229888585,0.344745680736619,0,0,1.50593871634084,1.36453075028923,0,0,0,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0,0,0.502497330513487,0,0,0.605399502633369,0,0,0,0,0,0.44931452458598,0.300353785683013,0.32145117339416,0,0,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0,0,0,0,1.70763890732835,0.587237189370939,1.14681968437569,1.32171328579026,0,0,2.75393678159366,3.14408610199332,1.85041349099558,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0.25618263945135,0.130059347559878,0.493313713811028,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,1.20964045934839,2.94184215361858,1.59306844271079,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.523916301990851,0,0,0.324547393654683,0.522389211897802,0,1.90792499444274,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0.882926198829301,0.245976877086227,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0.492663237895943,0.176096868026452,0.414656231081544,0.144119953416961,0.50496973370552,0.063497894292169,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0,0.205476322550383,0,1.00876629594175,1.18218456121156,3.23441362289276,3.20857590699371,0,0,0,0.167516265334349,0.637938751653163,0,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.620304078368662,1.07857100409308,0.533637789017222,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0.276242966807689,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.183138929636687,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0.192444225451024,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0.962479855263359,0.735120647943095,0.371606350251437,0,0.924843963529383,0.637705090915289,0.199579371432817,0.383010740264733,0.211673582723883,0,0,0.684704037099577,0.156679895773023,0,0.338583555603207,0.321176150207399,0.201799707191048,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0.19538809540204,0.556812347790485,0,0,0.33307196799782,1.4098700508785,0,0.146508179271894,0,0.111443384277478,0.852408440419239,0,0,0.307160702099232,0,0.422008249231538,0.445234820091624,0.16480387422676,2.32237948940793,0.19924798825107,0,0.251932747854276,0,0.369254416383208,0,0.0898683511473268,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0,0,0.520855522170466,0.262379999988587,0,0.1137934482855,0,0,0.344743373241465,1.16641845353302,0.694499979733169,0.885741385813839,0.120596438625408,0,0.442317039724898,0.591095237907095,0,0.21787692703798,0.41827123283581,0,0.341826167541004,0,0,0.325942115766024,0.31900115973192,0.183195186803725,0,1.02193298195737,0.156980256395025,0.166211681900156,0,0,0.503464760927528,0.37950746544837,0.953619473882272,0.210998064528027,0.489698424477443,0.141353071433941,0,0,0.353830258013357,0,0.296521128680622,0,0.104421949505455,0.337005664903385,0,0,0.364909578431332,0,0.242780379534093,0,0,0,0.31593289814244,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0.173559738335131,0.685946781900644,0.174118413160805,0.17472666824203,0,0,0.219267951258557,0.410577285266046,0,0.0882561266915003,0.225980740780532,0,0,0.126621591911757,0.1955513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| |||
|short_description=p@chr19:16718183..16718186,- | |||
}} |
Revision as of 21:58, 20 January 2014
Short description: | p@chr19:16718183..16718186, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:16718183..16718186, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.96e-08 | 1 |
cranial nerve | 5.96e-08 | 1 |
nerve trunk | 5.96e-08 | 1 |
nerve connecting eye with brain | 5.96e-08 | 1 |
nerve | 5.96e-08 | 1 |
retinal neural layer | 5.96e-08 | 1 |
presumptive neural retina | 5.96e-08 | 1 |
seminal vesicle | 8.84e-08 | 1 |
seminal fluid secreting gland | 8.84e-08 | 1 |
mesothelium | 9.44e-08 | 1 |
seminiferous tubule of testis | 9.44e-08 | 1 |
epithelium of male gonad | 9.44e-08 | 1 |
epithelial cord | 9.44e-08 | 1 |
sex cord | 9.44e-08 | 1 |
seminiferous tubule epithelium | 9.44e-08 | 1 |
testis sex cord | 9.44e-08 | 1 |
genital ridge | 9.44e-08 | 1 |
primitive sex cord of indifferent gonad | 9.44e-08 | 1 |
coelomic epithelium | 9.44e-08 | 1 |
duct of male reproductive system | 2.40e-07 | 4 |