FFCP PHASE1:Hg19::chr1:149812975..149812992,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C600 | |||
|description=CAGE_peak_at_chr1:149812975..149812992,+ | |||
|id=chr1:149812975..149812992,+ | |||
|ontology_enrichment_celltype=CL:0002274!3.71e-08!5;CL:0000457!3.71e-08!5;CL:0002191!3.71e-08!5;CL:0000097!3.71e-08!5;CL:0000831!3.71e-08!5;CL:0002028!3.71e-08!5;CL:0000540!1.94e-07!6;CL:0000031!1.94e-07!6;CL:0000404!1.94e-07!6;CL:0000037!2.89e-07!172;CL:0000566!2.89e-07!172;CL:0002032!2.96e-07!165;CL:0000837!2.96e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.59e-28;2!CL:0000558;3.59e-28;2!CL:0000540;6.80e-21;6!CL:0000404;6.80e-21;6!CL:0002566;1.72e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.60e-28,2;CL:0000765,3.60e-28,2;CL:0000050,3.60e-28,2;CL:0000038,3.60e-28,2;CL:0000558,3.60e-28,2;CL:0000547,3.60e-28,2;CL:0000549,3.60e-28,2;CL:0000550,3.60e-28,2;CL:0000552,3.60e-28,2;CL:0000540,6.81e-21,6;CL:0000031,6.81e-21,6;CL:0000404,6.81e-21,6;CL:0000047,7.74e-16,8;CL:0002566,2.41e-14,1 | |||
|ontology_enrichment_development_v019=CL:0000031;6.80e-21;6!UBERON:0008947;2.59e-11;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!8.98e-22!9;UBERON:0001557!1.62e-13!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.63e-36;9!UBERON:0001557;2.63e-36;9!UBERON:0000065;8.23e-08;44!UBERON:0000072;1.06e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.89e-36,9;UBERON:0001557,2.51e-17,19;UBERON:0008947,1.18e-08,38;UBERON:0003258,1.18e-08,38;UBERON:0000072,5.57e-07,47 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0.580418477257168,0,0,0.502497330513487,0,0.434377689410233,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,1.77901850772711,0,0,0,0.661044872784862,0.954053754535364,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0.891283655081389,0.589211814949674,0.221533894583621,0.270803863765016,0.512365278902701,1.04047478047903,1.31550323682941,0.276350017785848,0.869409257205157,0.14828656316206,0,0,1.0197840842781,0.383220493601921,0,0.253019692019503,0,0.651083453856419,0.950452044448374,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0.756962552626885,0.72995471815166,0,0,0,0,0,1.77460200059766,0.842923450390509,1.20505514941741,1.10293972732394,1.30727666455444,1.42362371466658,0.134831308160164,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0.704387472105808,0.621984346622316,0.576479813667846,0.50496973370552,1.07946420296687,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7007567927943,3.13722541229881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41129722697529,2.88832816854191,4.56984371832104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:149812975..149812992,+ | |||
}} |
Revision as of 20:37, 10 January 2014
Short description: | p@chr1:149812975..149812992, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr1:149812975..149812992, + |
Coexpression cluster: | C600_Reticulocytes_CD34_HES3GFP_Hep2_Mesenchymal_iPS_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.60e-28 | 2 |
erythroblast | 3.60e-28 | 2 |
megakaryocyte-erythroid progenitor cell | 3.60e-28 | 2 |
erythroid progenitor cell | 3.60e-28 | 2 |
reticulocyte | 3.60e-28 | 2 |
proerythroblast | 3.60e-28 | 2 |
basophilic erythroblast | 3.60e-28 | 2 |
polychromatophilic erythroblast | 3.60e-28 | 2 |
orthochromatic erythroblast | 3.60e-28 | 2 |
neuron | 6.81e-21 | 6 |
neuroblast | 6.81e-21 | 6 |
electrically signaling cell | 6.81e-21 | 6 |
neuronal stem cell | 7.74e-16 | 8 |
dark melanocyte | 2.41e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.89e-36 | 9 |
upper respiratory tract | 2.51e-17 | 19 |
respiratory primordium | 1.18e-08 | 38 |
endoderm of foregut | 1.18e-08 | 38 |
segment of respiratory tract | 5.57e-07 | 47 |