FFCP PHASE1:Hg19::chr1:1567498..1567520,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8510 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7171 | |||
|TSSclassifier=strong | |||
|UniProt=D6REP6 | |||
|association_with_transcript=-21bp_to_ENST00000472264_5end | |||
|coexpression_cluster_id=C2532 | |||
|description=CAGE_peak_2_at_MMP23B_5end | |||
|id=chr1:1567498..1567520,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.00e-09;5!CL:0002504;2.64e-07;3!CL:1000279;2.64e-07;3!CL:1000280;2.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.81e-10,5;CL:0002504,2.65e-07,3;CL:1000279,2.65e-07,3;CL:1000280,2.65e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006603;5.71e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.32e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.28e-09;17!UBERON:0000922;3.58e-09;49!UBERON:0005409;9.03e-09;22!UBERON:0000059;2.63e-08;11!UBERON:0001155;1.20e-07;9!UBERON:0003978;3.69e-07;3!UBERON:0000946;3.69e-07;3!UBERON:0004921;4.03e-07;33!UBERON:0004151;9.17e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.18e-09,17;UBERON:0000059,2.29e-08,11;UBERON:0001155,1.05e-07,9;UBERON:0005409,1.68e-07,25;UBERON:0003978,3.86e-07,3;UBERON:0009751,3.86e-07,3;UBERON:0000946,3.86e-07,3;UBERON:0002523,3.86e-07,3;UBERON:0005983,3.86e-07,3;UBERON:0002165,3.86e-07,3;UBERON:0002062,3.86e-07,3;UBERON:0007280,3.86e-07,3 | |||
|phase1_expression=0.363356758541113,0,0.845726424575827,1.0007329835313,4.91657203870017,0.872338524100369,0,0,0,0.491467873003018,0.697801167972428,0,2.11013582582763,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0.766440987203842,0,0,0,0,0,0.451725357233318,0.511946444617674,2.49861453104692,0.473554504088034,0,0.604820229674197,1.33720097891754,0.579297615531196,0,0,0.383587685530591,0,0.50133791063589,0,0,0,0.0945348171640679,0.665188192387692,0.175669571386252,1.63723844372141,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,2.0078563452417,0,0,0,0,1.24484414159907,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0.910161361938026,2.15585442544872,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,2.80539524098069,1.85541675650079,2.90484857173796,1.45125477021519,1.7662459561294,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,4.41026134156626,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.576479813667846,1.64115163454294,0.063497894292169,0,0,0,0,0.600686115687835,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,5.29018576535146,9.22456729165453,0,0,4.97548728239564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,1.72502059887614,1.79680250791648,0,0,0,0,0,0,0,0,0.24538298343828,0,1.35632511849868,0,0,0,0,0.902838299183157,0,0,0,0,0.173767228936166,0.979005787313703,0.343143423810856,0,0.215714200818617,0.960548020230999,0.303127571446259,0,0.30239029332968,1.98486246255021,0.153461973288062,0.561320188866147,1.40953064181271,0.511707249066704,6.11244900345709,1.48418066444991,0,0.355123450626254,0,0,0,0,0,0,0.459257792658427,0,0.655622074797121,0,0.0770153371044148,0,0,0,0,0,0,0,1.08378575017541,1.50506932156456,0,0,0,0,0,0.256450125116389,0.656029291399411,0,1.854738209659,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,1.02359116524534,2.1396949401696,0,0,4.49681143958287,4.39259247577688,2.82749765629647,0,0,0,3.41343617362713,0,0,0.136499911407986,3.25232493493539,0,0,0,0,0.578775534266688,2.62357900818653,0,0,0,0,0.589494246078727,0,0,0,0,0,0.349934720244983,0,0,0,2.16530741786592,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,7.87856799634377,1.48482340416319,11.3649459776716,0,0,0.556543525114529,0,0,4.5827037297746,1.38141957765574,0,0,0,0,0,0,0,3.55116260292961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,4.46311499322023,0,0,0,0.108647371922008,1.5950057986596,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.442287822516696,2.4441205797345,0,0,0,0.067401132980677,8.02577647298789,0,0,0,0,1.57833761139756,2.41981432097328,0,0.63186579628488,0,0,0,0,0,0,0,0,1.73559738335131,0,0,2.09672001890436,0,0,0,0,1.45483524732629,0,1.58186518546373,0,0,0,0,0.64127056201227,7.89776080535604,0,0,0,0.171594997861965,0,0,0,0,0,0,1.15580235960608,0,0,0,0,0,8.65775443943988,4.58320848023367,1.43574604915363,1.39775300349294,1.28767814440971,2.00854311697685,3.69509098676994,0,0,0.236349546921671,0.164831716762333,0,0,0,0,0,0.803765742325096,1.78801267576404,1.24632101408756,0,0,0,0,0.709251365692784,2.93745693555989,0.316801009558219,0,0.191915197319445,4.2881719582402,2.64836788146173,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,4.16470909014009,2.98688179689365,5.79934677486074,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0,4.64033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,5.18977608124458,0.109209638192014,0.169732529954025,0,0.123935764259002,0.558644917973244,0,0.157723490002507,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0.690359926060101,0,10.6046562972453,0,0,0,0,3.252833896775,0.0675375846183947,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0.455324382702595,1.1531308121143,0,0,0.203909198930495,0,0,1.66847102838104,7.22136454224729,0,0,3.65263488203798,0,0,0.571812353413251,0.790068058663633,0,2.08629926763095,8.01711364730253,0,0,0,0.430227358820278,0,0.0852134047591577,0.846774100381858,0,0,0,0,0,0,0,0,5.799072156691,4.85710993059139,0,0,0,0,0.439762066981716,0,0.540219106755613,2.40415516554353,0,2.94177986104687,0,0,0,1.6906229103336,0,0.187967835959707,0.45120521581504,0,0,0,0,8.76403665895821,0,0,1.41994405973866,0,0,3.7031878836078,0.371995018166751,0.462175628631418,2.16313281061895,1.89249637252618,0,0.760191006068622,0.407955318967927,0,0.18378979906969,0,3.63737751447549,0.803892390468535,0,0,0.852935927603924,2.85677317756488,0,0.0620747142958579,0.33639558774184,0.445530107947154,0.808468755832877,0,1.36893320434112,0.471464371102113,0.860666464712116,2.99394320891412,0,0.106727345877715,0,0,9.38563769613817,3.78948476966886,4.88275413978886,0,1.61019034872821,0 | |||
|short_description=p2@MMP23B | |||
}} |
Revision as of 15:50, 10 January 2014
Short description: | p2@MMP23B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MMP23B_5end |
Coexpression cluster: | C2532_Mesenchymal_Hepatic_umbilical_ovary_amniotic_diaphragm_Preadipocyte |
Association with transcript: | -21bp_to_ENST00000472264_5end |
EntrezGene: | MMP23B |
HGNC: | 7171 |
UniProt: | D6REP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.81e-10 | 5 |
enteric smooth muscle cell | 2.65e-07 | 3 |
smooth muscle cell of large intestine | 2.65e-07 | 3 |
smooth muscle cell of colon | 2.65e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.18e-09 | 17 |
large intestine | 2.29e-08 | 11 |
colon | 1.05e-07 | 9 |
gastrointestinal system | 1.68e-07 | 25 |
valve | 3.86e-07 | 3 |
cardiac mesenchyme | 3.86e-07 | 3 |
cardial valve | 3.86e-07 | 3 |
tunica intima | 3.86e-07 | 3 |
heart layer | 3.86e-07 | 3 |
endocardium | 3.86e-07 | 3 |
endocardial cushion | 3.86e-07 | 3 |
presumptive endocardium | 3.86e-07 | 3 |