FFCP PHASE1:Hg19::chr1:171076859..171076870,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:171076859..171076870,+ | |||
|id=chr1:171076859..171076870,+ | |||
|ontology_enrichment_celltype=CL:0002564!1.44e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002564;1.59e-21;3!CL:0002616;1.41e-16;1!CL:0002549;5.93e-09;2!CL:0002600;5.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,9.47e-22,3;CL:0002616,8.86e-17,1;CL:0002549,4.34e-09,2;CL:0002600,6.42e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.78e-21!115;UBERON:0002242!1.44e-08!3;UBERON:0003068!1.44e-08!3;UBERON:0002328!1.44e-08!3;UBERON:0004880!1.44e-08!3;UBERON:0005284!1.77e-08!5;UBERON:0000481!4.16e-07!347;UBERON:0001044!8.40e-07!6;UBERON:0003293!8.40e-07!6;UBERON:0003294!8.40e-07!6;UBERON:0010047!8.40e-07!6;UBERON:0000167!8.40e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002242;1.59e-21;3!UBERON:0000996;1.41e-16;1!UBERON:0002171;1.41e-16;1!UBERON:0006518;1.41e-16;1!UBERON:0008949;1.41e-16;1!UBERON:0000101;1.41e-16;1!UBERON:0002167;1.41e-16;1!UBERON:0011135;2.52e-13;5!UBERON:0002216;2.52e-13;5!UBERON:0011134;2.52e-13;5!UBERON:0002209;2.52e-13;5!UBERON:0002213;2.52e-13;5!UBERON:0007844;2.52e-13;5!UBERON:0011138;2.52e-13;5!UBERON:0001130;2.52e-13;5!UBERON:0001066;2.52e-13;5!UBERON:0001468;2.52e-13;5!UBERON:0005629;5.93e-09;2!UBERON:0005358;5.93e-09;2!UBERON:0001886;5.93e-09;2!UBERON:0005406;5.93e-09;2!UBERON:0004086;5.93e-09;2!UBERON:0005282;5.93e-09;2!UBERON:0005281;5.93e-09;2!UBERON:0004905;1.13e-08;8!UBERON:0000982;1.13e-08;8!UBERON:0004770;1.13e-08;8!UBERON:0005178;6.36e-07;34!UBERON:0002224;6.36e-07;34!UBERON:0002048;6.89e-07;22!UBERON:0000117;6.89e-07;22!UBERON:0000171;6.89e-07;22!UBERON:0000170;6.89e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002242,9.47e-22,3;UBERON:0003068,9.47e-22,3;UBERON:0002328,9.47e-22,3;UBERON:0004880,9.47e-22,3;UBERON:0000996,1.41e-16,1;UBERON:0002171,2.25e-16,1;UBERON:0006518,2.25e-16,1;UBERON:0008949,2.25e-16,1;UBERON:0000101,2.25e-16,1;UBERON:0002167,2.25e-16,1;UBERON:0011135,1.85e-13,5;UBERON:0002216,1.85e-13,5;UBERON:0011134,1.85e-13,5;UBERON:0002209,1.85e-13,5;UBERON:0002213,1.85e-13,5;UBERON:0005856,1.85e-13,5;UBERON:0005866,1.85e-13,5;UBERON:0005863,1.85e-13,5;UBERON:0007844,1.85e-13,5;UBERON:0011138,1.85e-13,5;UBERON:0001130,1.85e-13,5;UBERON:0001066,1.85e-13,5;UBERON:0001468,1.85e-13,5;UBERON:0005629,4.34e-09,2;UBERON:0005358,4.34e-09,2;UBERON:0001886,4.34e-09,2;UBERON:0004086,4.34e-09,2;UBERON:0005282,4.34e-09,2;UBERON:0005281,4.34e-09,2;UBERON:0005406,4.70e-09,2;UBERON:0004905,9.31e-09,8;UBERON:0000982,9.31e-09,8;UBERON:0004770,9.31e-09,8;UBERON:0005178,1.68e-07,34;UBERON:0002224,1.68e-07,34;UBERON:0005181,2.72e-07,35;UBERON:0002048,7.03e-07,22;UBERON:0000117,7.03e-07,22;UBERON:0000171,7.03e-07,22;UBERON:0000170,7.03e-07,22;UBERON:0005597,7.03e-07,22;UBERON:0000118,7.03e-07,22;UBERON:0008947,9.86e-07,38;UBERON:0003258,9.86e-07,38 | |||
|phase1_expression=0,0.214100523890983,0,0,0,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0.495065411840187,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.490385709340376,1.81628913173918,0.576175924479999,0,0,0,0,0,0,0,0.408308342509787,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8403723757871,2.00068208423871,0.271265023699736,0.415941723061614,0.356857977594324,0,0.117141414992713,0.902838299183157,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0.322260734604821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,1.70859860108311,3.77290332239198,1.24271716604159,0.496166021811951,0,0,0,0,0.2506898940227,0.612691153526923,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0.829169439458779,0,0.426467963801962,0.23806443146374,0,0.124149428591716,0,0.572824424503484,0,0,0,0.134704106029175,0.430333232356058,0,0,0,0,0,0,0.244482888365733,0,1.33151354837103,0.402547587182052,0 | |||
|short_description=p@chr1:171076859..171076870,+ | |||
}} |
Revision as of 22:13, 10 January 2014
Short description: | p@chr1:171076859..171076870, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:171076859..171076870, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 9.47e-22 | 3 |
perirenal adipocyte cell | 8.86e-17 | 1 |
fibroblast of choroid plexus | 4.34e-09 | 2 |
smooth muscle cell of trachea | 6.42e-09 | 2 |