FFCP PHASE1:Hg19::chr20:10199531..10199552,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6616 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11132 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=50bp_to_ENST00000304886_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SNAP25_5end | |||
|id=chr20:10199531..10199552,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.50e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.39e-40!82;UBERON:0005743!1.01e-37!86;UBERON:0000073!8.08e-37!94;UBERON:0001016!8.08e-37!94;UBERON:0001049!1.69e-36!57;UBERON:0005068!1.69e-36!57;UBERON:0006241!1.69e-36!57;UBERON:0007135!1.69e-36!57;UBERON:0000955!2.08e-34!69;UBERON:0006238!2.08e-34!69;UBERON:0002616!1.31e-33!59;UBERON:0002346!3.64e-32!90;UBERON:0003075!4.87e-32!86;UBERON:0007284!4.87e-32!86;UBERON:0002780!9.71e-28!41;UBERON:0001890!9.71e-28!41;UBERON:0006240!9.71e-28!41;UBERON:0003080!1.52e-26!42;UBERON:0007023!4.48e-26!115;UBERON:0000924!7.40e-24!173;UBERON:0006601!7.40e-24!173;UBERON:0004121!2.22e-23!169;UBERON:0000033!3.06e-23!123;UBERON:0001893!7.00e-23!34;UBERON:0002020!7.31e-23!34;UBERON:0003528!7.31e-23!34;UBERON:0003056!2.50e-22!61;UBERON:0002791!4.64e-22!33;UBERON:0000153!5.67e-22!129;UBERON:0007811!5.67e-22!129;UBERON:0001869!8.50e-22!32;UBERON:0000956!8.49e-17!25;UBERON:0000203!8.49e-17!25;UBERON:0002619!8.51e-17!22;UBERON:0001950!2.39e-15!20;UBERON:0000481!2.90e-13!347;UBERON:0000475!4.05e-13!365;UBERON:0000064!3.10e-12!219;UBERON:0000062!3.87e-12!511;UBERON:0000477!9.43e-12!286;UBERON:0003076!6.23e-11!15;UBERON:0003057!6.23e-11!15;UBERON:0000119!1.08e-09!312;UBERON:0000922!1.08e-09!612;UBERON:0004732!1.32e-09!13;UBERON:0000468!1.87e-09!659;UBERON:0000483!2.17e-09!309;UBERON:0004111!3.38e-09!241;UBERON:0004733!4.31e-09!12;UBERON:0002028!4.31e-09!12;UBERON:0007277!4.31e-09!12;UBERON:0000467!5.00e-09!625;UBERON:0000480!6.97e-09!626;UBERON:0002050!7.05e-09!605;UBERON:0005423!7.05e-09!605;UBERON:0000923!1.22e-08!604;UBERON:0005291!1.22e-08!604;UBERON:0006598!1.22e-08!604;UBERON:0002532!1.22e-08!604;UBERON:0000025!1.22e-08!194;UBERON:0002420!1.28e-07!9;UBERON:0007245!1.28e-07!9;UBERON:0010009!1.28e-07!9;UBERON:0010011!1.28e-07!9;UBERON:0000454!1.28e-07!9;UBERON:0002308!1.58e-07!9;UBERON:0000125!1.58e-07!9;UBERON:0002680!4.15e-07!9;UBERON:0001895!4.15e-07!9;UBERON:0010092!4.15e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;6.74e-26;53!UBERON:0002616;6.74e-26;53!UBERON:0002780;1.59e-25;41!UBERON:0001890;1.59e-25;41!UBERON:0001893;1.23e-24;34!UBERON:0003528;2.26e-24;34!UBERON:0002020;2.26e-24;34!UBERON:0001869;2.61e-24;32!UBERON:0002791;6.15e-24;32!UBERON:0002619;1.05e-22;22!UBERON:0001950;1.00e-20;20!UBERON:0000956;2.26e-20;25!UBERON:0000203;2.26e-20;25!UBERON:0000955;2.59e-20;68!UBERON:0001017;1.08e-19;75!UBERON:0001016;1.60e-17;83!UBERON:0004732;1.88e-12;13!UBERON:0004733;9.38e-12;12!UBERON:0002028;9.38e-12;12!UBERON:0002420;8.02e-10;9!UBERON:0007245;8.02e-10;9!UBERON:0010009;8.02e-10;9!UBERON:0010011;8.02e-10;9!UBERON:0000454;8.02e-10;9!UBERON:0000125;1.07e-09;9!UBERON:0002308;1.07e-09;9!UBERON:0002680;4.69e-09;9!UBERON:0001895;4.69e-09;9!UBERON:0011216;5.94e-09;132!UBERON:0007023;8.15e-09;114!UBERON:0000200;4.56e-08;6!UBERON:0001894;5.44e-08;7!UBERON:0009663;8.01e-08;7!UBERON:0002298;2.78e-07;6!UBERON:0001872;8.63e-07;5!UBERON:0002021;9.43e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.84e-49,81;UBERON:0001049,1.11e-48,56;UBERON:0005068,1.11e-48,56;UBERON:0006241,1.11e-48,56;UBERON:0007135,1.11e-48,56;UBERON:0001016,1.40e-47,89;UBERON:0000073,5.76e-46,53;UBERON:0002616,5.76e-46,53;UBERON:0000955,5.87e-43,68;UBERON:0006238,5.87e-43,68;UBERON:0003075,3.05e-42,82;UBERON:0007284,3.05e-42,82;UBERON:0002346,6.86e-42,86;UBERON:0002780,4.31e-35,41;UBERON:0001890,4.31e-35,41;UBERON:0003080,4.31e-35,41;UBERON:0006240,4.31e-35,41;UBERON:0010371,1.23e-34,104;UBERON:0011216,5.51e-33,223;UBERON:0003056,2.31e-30,61;UBERON:0004121,4.73e-29,171;UBERON:0000924,4.73e-29,171;UBERON:0006601,4.73e-29,171;UBERON:0007023,8.85e-29,114;UBERON:0001893,1.71e-28,34;UBERON:0003528,1.81e-28,34;UBERON:0002020,1.81e-28,34;UBERON:0001869,5.21e-27,32;UBERON:0002791,1.48e-26,32;UBERON:0002619,1.10e-22,22;UBERON:0010314,1.01e-21,132;UBERON:0001950,1.04e-20,20;UBERON:0000956,2.99e-20,25;UBERON:0000203,2.99e-20,25;UBERON:0003076,2.52e-14,15;UBERON:0003057,2.52e-14,15;UBERON:0004732,1.61e-12,13;UBERON:0004733,8.07e-12,12;UBERON:0002028,8.07e-12,12;UBERON:0007277,8.07e-12,12;UBERON:0000025,3.89e-11,192;UBERON:0004111,6.66e-11,240;UBERON:0000923,1.02e-10,560;UBERON:0010316,1.02e-10,560;UBERON:0005291,1.02e-10,560;UBERON:0006598,1.02e-10,560;UBERON:0010317,1.02e-10,560;UBERON:0002532,1.02e-10,560;UBERON:0002050,1.07e-10,564;UBERON:0000483,1.80e-10,306;UBERON:0005423,3.97e-10,581;UBERON:0000119,4.38e-10,309;UBERON:0000922,7.74e-10,592;UBERON:0002420,8.07e-10,9;UBERON:0007245,8.07e-10,9;UBERON:0010009,8.07e-10,9;UBERON:0010011,8.07e-10,9;UBERON:0000454,8.07e-10,9;UBERON:0000125,1.08e-09,9;UBERON:0002308,1.08e-09,9;UBERON:0002680,4.00e-09,9;UBERON:0001895,4.00e-09,9;UBERON:0010092,4.00e-09,9;UBERON:0000200,4.65e-08,6;UBERON:0001894,5.53e-08,7;UBERON:0006222,5.53e-08,7;UBERON:0009663,8.02e-08,7;UBERON:0002298,2.83e-07,6;UBERON:0001872,8.71e-07,5;UBERON:0002021,9.52e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,2.47532705920093,1.32558950291166,0,0,0,0,2.83178433576612,4.69201589861782,2.82109249330279,0.572471974262113,0.821246550437305,1.12988375635323,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,1.51255707462509,1.55210578223795,0.87834785693126,61.6911445594227,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0.71153252537342,0.66944122552934,0,0,0,0.367663080345869,0,2.32179293538607,1.34717623575702,0.788280363383256,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0.622422070799533,0.404132016209064,0,1.05950199351452,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.822041490506354,0.971237666208789,0.280901613404497,1.83738754129404,0.491337269247072,3.09977343527296,4.75201142912821,0.247266929278557,4.55080680969013,2.87447256726495,0.168336113954066,0.875829639103749,2.21651292387346,0.877955241761676,0,2.25357088359895,0.113432183160021,0.89694817844431,0.213557388818567,0,0,0,0.515281080091258,0,0.506328996723799,0.584622030967192,0.252433774244115,0.0920498986422993,0,2.13005755509969,0.806016785821122,0.169560592310488,0,0,0,0.243947412259191,0,0.348581828608555,1.24393266018445,0.504641701751257,0,0,1.28648187638577,0,0,2.88751792667834,0.354920400119532,0.674338760312407,0.241011029883482,0.330881918197182,0.653638332277218,0.71181185733329,0.539325232640658,0.588664395376038,0.38474715694639,0,0,0,1.47008711385542,0,0,1.77236972004421,3.09024169590255,0,2.74508496477641,0,0,0,0,0,0,0,1.15930404975077,1.76113041353732,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,4.31785681186749,0,0,1.71072446022705,0.102827492703324,0,0.285826432630578,0.448524337381443,0.43596006883328,0.66004457238855,0,0,0,0,0,3.08648849114571,0,2.1313774321288,6.29103172095849,1.62786481617433,0,0.325736184293735,5.33087923113819,0,5.12446941001296,1.74306691720059,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,8.38512259934129,37.7405576187103,20.8787979449978,34.5083506588758,13.3967137847164,0,0,0,1.47229790062968,5.00170521059677,13.291986161287,0,0.178428988797162,0,0,0,0,0,0,1.10621501125022,1.47702144595741,0.587403472388222,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,1.48418066444991,0,0.532685175939381,0.246381468041427,0.519254429183621,0.464841513839837,0,0,0,3.55924789310281,2.1850940160806,4.98272776845812,0.451199612907412,0.15403067420883,0.784349769176855,1.46139224653261,0.633309773357254,1.13733384070897,0,0,0,0.812839312631559,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0.366277859273374,0.41254749960294,0,0,0,0.290012154876366,2.31072925671967,1.07452572308291,0.137836572484531,0.537101224341368,1.16013355131383,0.255679882248303,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0.744316738719335,0.949138274156178,0,1.79128453917934,1.28381696410176,0,0,2.51821440616641,4.94166653524899,4.94812089851883,0,0,0,0.975267478179181,0,0,1.36499911407986,3.11091950298168,1.13008116620243,0,0,0,6.94530641120025,5.24715801637306,0,0,0,1.57752487424457,0.491245205065606,0,0,0,0,1.51789269506286,0.349934720244983,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,2.12923118845163,0,0,0.447352215784832,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.890894042497916,0,369.822924969063,275.993394997426,8.79338769680957,0,0,2.98871982376605,1.10513566212459,19.146888836925,0,0,1.24415835064723,0.179736702294654,0.358042349351218,0,1.38100767891707,0,0,283.045161859804,468.386127619187,29.9420697001791,0,0,0,0,0,0,19.6503722747635,7.58171994796461,11.285624670664,152.34751835998,156.292984458529,358.567080345146,440.216033786205,429.430690339505,420.342420947011,3.70390775964567,0,2.00070672109872,6.38075512743207,0,0,0,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,11.6849865460729,1.99052386215701,1.85760885457012,1.83309043480088,185.91874768275,127.270857114898,133.555673417477,26.6908486603481,0,186.943027688821,0,0,0.728341138602278,26.4371549909092,0,43.4623321515296,9.09886746650227,2.40517471063188,0.311064574191741,0.664653872707185,0,0.313932918407225,0,0,0,0,0,0.261177619741208,3.66926003308263,0,0.677294319023596,0.65780385377567,0.164230914106418,0.581934098930517,0,62.822645936988,1.50746117111426,0,559.79405784188,0.391102765469606,1.04206466326994,1.28071796843612,0,0,0,24.5380846942609,0.432164393964449,0.248505071130865,1.41416420770077,0,0,1.63197148218115,6.93481415763645,63.6445506032377,37.9227899530821,0,0,108.572477317357,3.0721064139948,0.687481272035051,0,0,0,0.669514372325618,0.739018197353989,0,0,0,0,0,1.57483970423598,0,252.087811669549,207.573990914041,0.160753148465019,0.825236619583403,0,0,0,465.159355330495,0,0.315222829196793,0.681909645754975,0,1.6135860539956,0,0,0,0,2.71499800876856,2.5926644736038,7.184921922407,3.59190574687462,0,1.02232813071253,3.5126748371239,0,2.65013777824443,163.672222753723,92.2983560163976,4.27717094710824,0,0.106787412567695,1.72924735609633,0.828478110694391,0,0,0,0,0,0,0,0,0,464.299726302701,465.042095541382,466.586598743125,50.4600092207263,88.632312177945,127.235529626895,6.22568857213039,0.124980407962107,0,6.85116800507922,1.41159491818903,19.2017311380821,21.3033912057913,1.04478362020812,0,0.554805861502613,7.95492622155374,3.77351852628863,0,0,0,0,0,1.27437413730962,1.34940933649081,1.70789252563885,1.24411862352257,0.797525143673985,1.5652351854352,5.7097891418943,0.761610424337591,1.22061219961398,7.45579502730494,1.50374779859484,3.71227007902795,1.59238355479446,0,0,0,0,0.385239660814607,0.428883182749851,1.30497145982606,0,0,0,0,3.08801447160972,0.657852148736121,0.530067437837643,0,0,0,0,0,423.485589932751,0,0.132864840313363,0,4.25892803500336,12.7801912551934,0,43.9972270880846,0,0,3.40509572140102,0,0,1.24415452006595,5.62735233736067,9.91988264849473,0.786329709279482,46.3048865934139,0,2.33832412111851,8.30369620535315,0,0,0,72.8519380939777,2.82140754952547,0,383.384244600767,460.513873058151,344.968769422504,649.39840918623,64.2782825365381,536.037863850153,414.830933628225,8.56616521554926,0,0,0,0,0,0,0,3.83572674581212,2.42046082444224,0.781514011233092,0,0.163771917510097,0,589.130350626257,367.106706348508,545.033082373622,471.686796222279,70.5597503633503,0.548257766857182,0.496211178389294,0.351742488719241,0,234.101702278811,133.168353998654,54.0199387770602,41.6621810172875,0.0887023701626388,0,3.08678416987353,546.612592599681,575.380223127804,0.236387681767936,0,2.35479278551542,210.063543717695,0,8.21842848458546,0.647782773655864,6.21077194253165,36.0956548092115,12.7991025503509,0,1.73858272302579,10.4222477414933,0,0,0,0,0,0,107.540310748496,1.3746412112643,0,0,0.111855431797792,0,0,0,0,1.1598144313382,1.94284397223656,14.5042467346505,16.3139635632322,0.356760272332706,1.58124514854544,9.67476547359776,18.8703554458342,1.23478652972711,2.84127428655144,40.9176047834525,0.490296643507811,35.8228351594471,72.4378243654148,17.5257376192981,43.1108842135068,0,0,0.128915775947154,0,0,0.352894871715692,0,1.46067277649303,0,5.3035645766037,0.157771562193185,384.151919578668,43.6350690340377,8.99345628876181,0.371995018166751,0,0,0,0,0,0.101988829741982,0.26721740526556,2.29737248837112,0,1.43979526614655,4.28742608249886,89.5502994615482,55.9572507612853,0.426467963801962,0.476128862927481,0.193766729508018,0,0.112131862580613,0,0.404234377916439,0.217716747896961,0.342233301085281,0.26940821205835,0.286888821570705,1.33064142618405,0.325613074443898,0.747091421144008,7.7228912914776,0,0,5.01189921149752,2.44137706989443,1.99727032255654,1.81146414231924,0 | |||
|short_description=p3@SNAP25 | |||
}} |
Revision as of 10:15, 21 January 2014
Short description: | p3@SNAP25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SNAP25_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 50bp_to_ENST00000304886_5end |
EntrezGene: | SNAP25 |
HGNC: | 11132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data