FFCP PHASE1:Hg19::chr20:34330534..34330580,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C875 | |||
|description=CAGE_peak_at_chr20:34330534..34330580,+ | |||
|id=chr20:34330534..34330580,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.36e-46!140;CL:0000988!2.53e-38!182;CL:0000037!5.37e-38!172;CL:0000566!5.37e-38!172;CL:0002031!5.45e-37!124;CL:0002032!2.08e-34!165;CL:0000837!2.08e-34!165;CL:0002087!5.15e-34!119;CL:0000860!1.34e-24!45;CL:0002057!2.37e-24!42;CL:0000766!1.37e-22!76;CL:0000839!1.42e-18!70;CL:0000557!5.91e-18!71;CL:0000763!1.56e-17!112;CL:0000049!1.56e-17!112;CL:0002009!9.19e-17!65;CL:0000838!9.76e-17!52;CL:0000542!1.64e-16!53;CL:0000051!1.64e-16!53;CL:0002194!9.69e-16!63;CL:0000576!9.69e-16!63;CL:0000040!9.69e-16!63;CL:0000559!9.69e-16!63;CL:0002320!2.31e-15!365;CL:0000134!2.42e-15!358;CL:0000034!1.86e-13!444;CL:0000219!4.08e-13!390;CL:0000003!6.75e-13!722;CL:0000048!1.24e-12!430;CL:0000723!1.52e-12!436;CL:0000791!2.07e-09!18;CL:0000789!2.07e-09!18;CL:0002420!2.07e-09!18;CL:0002419!2.07e-09!18;CL:0000790!2.07e-09!18;CL:0000945!5.26e-09!24;CL:0000826!5.26e-09!24;CL:0000236!1.56e-07!14;CL:0000084!2.12e-07!25;CL:0000827!2.12e-07!25;CL:0002393!4.33e-07!9;CL:0002397!4.33e-07!9;CL:0000144!5.19e-07!625;CL:0000625!6.37e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.35e-18;33!CL:0002057;3.35e-18;33!CL:0000576;1.17e-14;48!CL:0000473;1.01e-12;39!CL:0000234;1.01e-12;39!CL:0002087;1.95e-12;104!CL:0000766;2.09e-12;69!CL:0000542;3.14e-10;53!CL:0000791;5.21e-10;18!CL:0000789;5.21e-10;18!CL:0002419;5.21e-10;18!CL:0000738;5.25e-10;136!CL:0000945;5.47e-09;24!CL:0000236;5.65e-08;13!CL:0000084;1.95e-07;25!CL:0000625;2.50e-07;11!CL:0000988;3.46e-07;177!CL:0000094;4.43e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.04e-47,136;CL:0000988,6.51e-39,177;CL:0000037,7.52e-39,168;CL:0002031,3.53e-38,120;CL:0002032,4.15e-35,161;CL:0000837,4.15e-35,161;CL:0002087,4.66e-35,115;CL:0000860,1.77e-25,42;CL:0002057,1.77e-25,42;CL:0000766,5.98e-24,72;CL:0000473,4.75e-21,48;CL:0000234,4.75e-21,48;CL:0000839,1.16e-19,66;CL:0000557,3.17e-19,67;CL:0000763,4.19e-18,108;CL:0000049,4.19e-18,108;CL:0002009,9.54e-18,61;CL:0000838,1.01e-16,52;CL:0002194,1.18e-16,59;CL:0000576,1.18e-16,59;CL:0000040,1.18e-16,59;CL:0000559,1.18e-16,59;CL:0000542,1.68e-16,53;CL:0000051,1.68e-16,53;CL:0002320,8.54e-15,361;CL:0000134,1.27e-14,354;CL:0000219,3.34e-12,386;CL:0000034,3.60e-12,441;CL:0000048,1.55e-11,427;CL:0000723,2.11e-11,433;CL:0000791,8.47e-10,18;CL:0000789,8.47e-10,18;CL:0002420,8.47e-10,18;CL:0002419,8.47e-10,18;CL:0000790,8.47e-10,18;CL:0000945,2.25e-09,24;CL:0000826,2.25e-09,24;CL:0000236,7.88e-08,14;CL:0002393,2.31e-07,9;CL:0002397,2.31e-07,9;CL:0000625,3.45e-07,11;CL:0000084,5.08e-07,25;CL:0000827,5.08e-07,25;CL:0000094,5.71e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;7.76e-19;42!CL:0000051;3.14e-10;53!CL:0000790;5.21e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.48e-24!102;UBERON:0003061!7.48e-24!102;UBERON:0002193!1.61e-22!112;UBERON:0002371!5.98e-18!80;UBERON:0002405!1.16e-15!115;UBERON:0001474!6.01e-15!86;UBERON:0002384!5.28e-14!375;UBERON:0004765!1.59e-11!101;UBERON:0001434!1.59e-11!101;UBERON:0003081!3.39e-08!216;UBERON:0000178!8.57e-07!15;UBERON:0000179!8.57e-07!15;UBERON:0000463!8.57e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.58e-07;15!UBERON:0000179;6.58e-07;15!UBERON:0000463;6.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.34e-25,98;UBERON:0003061,3.34e-25,98;UBERON:0002193,1.36e-23,108;UBERON:0002371,4.02e-19,76;UBERON:0002405,6.09e-18,93;UBERON:0001474,2.14e-16,82;UBERON:0004765,2.23e-15,90;UBERON:0002384,1.62e-13,371;UBERON:0001434,8.96e-12,100;UBERON:0003081,1.84e-10,203;UBERON:0000178,4.71e-07,15;UBERON:0000179,4.71e-07,15;UBERON:0000463,4.71e-07,15 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.845726424575827,3.00219895059391,1.34088328328186,1.74467704820074,2.53299878168311,1.89515962028049,2.35067065379855,1.22866968250754,1.39560233594486,1.52908960491121,1.31883489114227,1.8564952944007,0.331397375727916,1.34465029290355,1.20538905604795,0.730310090387373,1.95173119516203,1.84681587115182,0.816002764977012,2.19418305034661,1.14494394852423,1.36874425072884,2.00868223351684,4.27915072188527,3.03772180964799,3.93553906568396,34.6160563627036,21.8782756915411,15.7912445782398,4.59710612239464,3.31326510656075,4.43704812200145,2.94375362205146,2.13253848731132,10.8632162553893,31.0237428777851,19.4528114046037,24.7392392616071,0.895661896959697,2.91504299417082,1.28787783817093,6.97911546141911,7.935394817465,10.9162827534517,13.4808841405297,6.57868620834921,16.7241440283356,16.3984663623626,14.8573209786878,23.6482229888585,18.6162667597774,20.6555098746824,31.1480919166986,11.6710250516415,9.00590295190891,22.0229014756183,9.48860066349798,24.069677030707,22.3767994029664,9.23583640522805,10.1726465387032,10.2293940127847,10.447532590629,20.9932533135722,20.553134216854,13.3161792586074,15.1230046341858,27.1486055881396,9.6863920421339,25.7794345191295,25.9499157701525,32.9558246646629,40.1822126933932,34.3840178633736,26.6218855817193,19.2226422837128,27.0018985651095,25.6511469367124,17.5046675935199,21.3717059904622,14.0796995569058,24.0300988955338,19.5692035849982,13.2286368995617,23.2229672480887,29.3123744376786,18.5092564379761,20.0351288452426,9.10740750575117,12.3319809767897,9.17455747500549,19.8256992868539,19.0572911413722,3.16060901730092,13.7696839079683,12.5763444079733,20.5601498999509,4.17966238476695,15.9701910650459,10.8892995318989,9.74133642039557,5.45911238737351,8.83817722424511,5.98141515375777,15.1650163708409,2.17755243533648,2.21100890851793,2.63100647365882,4.42160028457357,4.34704628602579,20.1669725900402,11.7717964359474,9.40819714244791,4.53237370790265,14.562378756873,17.8686271650968,25.5549888939698,9.5569624297229,7.81300144627702,18.0585888445191,10.2391080972885,14.2065138381404,23.7368380449457,7.57687206540854,14.7803039445788,26.0072698759905,13.1045695933919,13.1790207533347,0,0.670700859703636,0,0.722878304769133,2.00535164254356,0.869079113764942,1.5905718941022,5.35298357332899,1.70162670895322,1.55210578223795,0.351339142772504,1.57174890597255,0.728590576585084,1.11235332835329,0.324547393654683,0.696518949197069,1.19662164466979,15.7403812041526,12.5838880371628,12.6295550452052,1.59009925893364,0.860234595106124,1.04142150482278,1.69592382577203,1.67799774483962,0.550236083880135,3.55291443112578,1.29208379584664,0.71153252537342,1.33888245105868,1.20848795132744,0.760272105718513,0.732186172644509,0.367663080345869,2.43042584364528,1.16089646769304,1.12264686313085,0.900891843866578,3.06633274931766,4.74632829784064,2.19842092716489,90.9284880308836,69.8004475466986,1.74437620857014,0.993943903390637,0.886413581652058,13.1085089005087,3.15520282823695,1.77334191099179,3.92474320099615,0,1.48000529050296,0.311211035399766,0.808264032418128,0.490385709340376,2.8757911252537,1.15235184896,0.937285727335186,0.312160076830321,0.570471821544449,0.149448680551801,1.05691048779388,0.971237666208789,0.702254033511242,0.816616685019573,0.368502951935304,1.44656093646072,3.56400857184616,1.23633464639278,1.82032272387605,2.15585442544872,0.673344455816265,1.00094815897571,1.38532057742091,0.877955241761676,1.83892677479412,1.05166641234618,0.907457465280168,3.40840307808838,1.06778694409284,1.90738711043606,0.300091096084402,1.33968288009971,1.54584324027377,1.67505170698431,1.5189869901714,0.974370051611986,2.27190396819703,1.74894807420369,2.7479829659198,1.06502877754984,1.71278566986988,1.18692414617341,0.57978255948989,1.36373060295417,0.573609190778008,1.46368447355514,2.12047629314376,1.2781333715647,0.932949495138334,1.7662459561294,2.18986415445498,1.56449532329816,1.28648187638577,6.90674606762403,2.78620756819187,0.721879481669586,1.41968160047813,2.69735504124963,1.20505514941741,1.32352767278873,1.96091499683166,2.84724742933316,4.1797705529651,4.90553662813365,3.46272441251751,1.4763109092493,0,2.057870056657,1.47008711385542,1.26755034821831,2.94848165003288,0.590789906681404,7.94633578946371,5.28850285735388,0.171567810298526,1.09750285408626,2.24803506515239,0.100528972411631,0.925884451585296,1.3032332212413,0,0,0.927443239800615,0.469634776943287,1.15493158208859,3.24089858803628,1.71228737011138,8.69224837755203,7.72637545885385,1.23108503043699,0.702012795417713,1.0404181360211,2.81201501960331,1.6798212819886,2.1266264586358,0.268675568108545,1.74380363108377,1.15014803749563,3.4486426652716,2.3773077183571,34.2091390642274,40.3535869567492,40.2713362630152,0.380987365753014,3.4378958300245,4.68869788840188,3.4214489204541,0.719792448923265,0.901029173531752,0.285826432630578,2.01835951821649,2.1798003441664,0.7333828582095,0,3.57656445851882,0.845302752556,0.531876233169741,3.12022310734098,4.62973273671856,1.41849132023278,2.66422179016099,1.28680194292333,3.25572963234866,2.46972101034231,0.325736184293735,0.355391948742546,0.791951872933429,1.50719688529793,1.74306691720059,0.799783929456456,2.43247561282381,1.00451418286425,0,0.958499421966331,1.14861935834114,0,1.01346914667305,1.43833425785268,0.895304816199478,1.34502172792233,34.2833522751353,21.1315023362327,32.2141021062168,2.03275699377971,5.20559415430487,3.09315525111078,0.670065061337395,1.91381625495949,55.4265197720915,29.9161459204025,53.8740167466846,2.08575535922538,0,1.35632511849868,0.207970861530807,0.713715955188647,0.315404830067869,0.117141414992713,1.20378439891088,0,2.0694614258501,0.664225598535437,0.737476674166813,0.868836144680828,4.89502893656851,5.14715135716284,15.0940659069708,27.1799893031457,7.36420148843766,4.24378600024763,1.66435439510497,1.81434175997808,2.23297027036899,2.30192959932094,0.561320188866147,1.40953064181271,0.511707249066704,1.44768529029247,1.48418066444991,1.07946785661859,0.355123450626254,0.821271560138091,0,0.348631135379878,5.55953468121462,1.80455823272956,0.644566922551274,1.37777337797528,1.0925470080403,1.70461739447251,0.902399225814824,0.0770153371044148,1.56869953835371,0,0.105551628892876,2.27466768141793,1.70093705276516,0.431831832204279,6.16909010761157,2.43851793789468,0.501689773854853,1.01950509218015,0.831076008928724,0.895499018888713,4.82371728621056,5.22870902049801,0.512900250232778,1.64007322849853,0.325378394664303,2.47298427954533,1.92295876118521,1.73269949833235,5.74265537996172,5.20048196829217,0,2.32009723901093,1.54048617114644,1.5350367472613,0.964856007391714,1.39646318328756,0.435050081742686,1.27839941124151,1.24644849905432,1.4875642382488,0.576570202095319,2.93509238737543,1.6185244936888,0,2.51849877464512,1.3940745403212,1.23213432070436,2.66153015158511,0,1.29726953372744,2.71937284809783,1.116475108079,0,0.190630193923825,1.02359116524534,0.855877976067841,2.86382923133343,3.13979456079692,0.899362287916574,1.09814811894422,0.706874414074119,0.808729926293264,1.58510321173008,0.842516912477962,3.90106991271672,0.731140468893853,2.11300293513511,1.36499911407986,0.989838023675989,1.13008116620243,4.41092274836899,1.99031692572366,0.438450885253763,1.73632660280006,1.31178950409327,2.43492452355245,1.8589409885985,2.81695602532241,1.14729081763241,0.0982490410131212,3.21003946333125,0.354761064070598,0.211107635297664,0.987884678879706,2.27683904259429,3.84928192269481,2.21310859268678,0.670302275535787,5.44454924306613,1.7887322147588,0.86101074534246,0,0.886860307073351,0.459446800413919,15.7308758861972,6.88173486428138,4.5571774973933,6.4322579373603,9.46133228098247,12.9694662238543,9.72056587028607,3.17250070517708,0.427296284509893,0,0.245040215981032,1.48642540100575,2.16403819464667,0.995985806877798,0.637705090915289,2.19537308576098,2.2980644415884,2.32840940996271,0.973865820823666,2.24637742490767,0.684704037099577,2.0368386450493,2.50634477090067,0.338583555603207,4.33587802779989,2.62339619348362,1.27753871307098,1.37402137902306,3.07240764308458,2.46043718681657,1.66849141711908,2.73543333562856,1.67043704337145,0,0.540911356951966,0.66614393599564,0,0.37428108081644,2.05111450980652,0.36408156524854,3.67763168115679,0.568272293612826,1.19372242368845,1.78178808499583,2.45728561679386,2.98244294329889,2.39138007897872,1.66963057534359,3.13127361030843,0.422250816255987,2.78947183551498,1.10513566212459,0.251932747854276,0.306806047506464,2.58478091468246,0.311039587661807,0.359473404589307,0.358042349351218,0.511572370226872,0.887790650732402,4.7896618469388,0,0.969332746095218,0.278304294485554,0,0,2.79871999987826,0,0.796554137998498,1.01701460117107,0.709163045303809,1.03423011972439,0.874813840149763,2.95162491386597,2.65722415744152,1.80894657938112,1.52581736317083,2.98564001814306,2.36438095162838,0.87754158861589,1.41620002574687,1.53366118706464,0.692552326534174,2.39278317278703,0.69169171316418,0.538545866458633,0.760531603454056,3.50901275705111,1.19076871422421,0.533034776018635,1.02193298195737,1.2558420511602,0.498635045700469,1.1279783030859,0.980312671588698,0.503464760927528,1.13852239634511,0.794682894901893,1.68798451622422,1.14262965711403,2.82706142867882,1.51472047819464,0.995261931078505,0.619202951523374,0.611030144933625,7.41302821701555,1.97702302314405,2.40170483862547,1.21322039365219,1.60515529459758,1.40558667435203,3.83155057352899,1.36965233252463,0.242780379534093,0.789168805698781,1.20990716048664,1.22429104652196,3.28570214068137,4.96067284067825,1.55532287095871,0,0.661983911750998,0.313932918407225,0,1.13843818411917,0,0.694238953340524,1.56787835863004,2.52471699083167,1.04836000945218,0.51595809741485,1.83837029449262,3.50828722013691,3.61308011034121,0.0969890164884194,0.176512253383001,0.90392296312213,0.137041924646751,0.993573058514948,1.45614830698521,1.17330829640882,0.160317640503067,1.70762395791482,0.599428828746391,2.16135625731159,1.4889757501569,2.57392496792947,1.87271237384595,0.869767748958028,0.235694034616795,0.407712618220842,0.627617077873999,1.73396969981747,0,0.600420288709789,0.821432273351958,0,1.28929632425987,2.10309883423452,1.67569440763353,0.687481272035051,0,1.59743200399193,0.858452096273142,0.223171457441873,0.335917362433631,0,2.32991899054908,3.62402638613229,4.12079291905832,2.89835238572995,1.67326718575073,1.94748663751304,1.59045937961861,0.544813624446302,3.21506296930038,2.20063098555574,2.9080823662043,14.1733551677445,26.3092664549703,1.64023802976667,1.0063040627978,1.41850273138557,1.57363764404994,0.422401346077626,0.717149357331379,0.767660789277781,1.42939065274673,0,1.27134268827375,1.62899880526114,0.864221491201268,1.30634944043764,0,3.44788587147224,2.04465626142506,0.566560457600628,0.732761168390412,2.65013777824443,1.68067843270016,2.11572162788304,0.171086837884329,0,3.09683496446315,1.10043013569766,2.48543433208317,1.48849806543585,1.18566979138767,3.41019275466509,0,2.1760712134779,3.0082787282724,3.06345576763462,4.59021682993726,1.57054096250234,0,0.732157589411779,1.1267183763585,2.29363678276028,1.77486482458964,1.55241007353459,1.10678907948985,2.49960815924213,1.06154382279153,0.285465333544967,0.235265819698172,2.34167452903441,2.3187364577732,1.49254802886874,2.57084640831947,0,2.84104507912634,1.76097531226803,0.889811221596536,1.83072054717539,2.57092570397506,0.621748802331122,1.33069634990671,1.11507737014592,1.34940933649081,0.310525913752519,0.829412415681711,0.53168342911599,2.08698024724694,1.95334891696384,1.14241563650639,2.03435366602331,0.363697318405119,0.644463342254931,0.464033759878494,0,2.00013882331577,1.03018711554838,0.673498977531838,1.26184898228651,0.192619830407303,0.428883182749851,4.69789725537381,1.36023555307363,2.08370226891451,1.71315693154527,2.14906609297785,5.24962460173653,3.0699766941019,2.29695889729645,2.50788249752189,2.53413660979609,2.81865670446741,3.79973375904318,2.43087964941906,1.7973596699725,7.79441235357554,5.58032329316125,9.81392365535065,1.96565909307848,0.983091635014877,0.422624246717254,0.999936979274649,1.28030075632969,10.8495437186314,0,5.33907255730338,1.11903606175556,0,2.55788742607303,0.431299245586727,2.83078695340614,1.31051565830417,0.848662649770126,1.2754495206101,2.72658681369805,0,0.318004350653419,8.04389799012784,4.00285374142735,0,0,1.09189682663981,0,1.11743701340006,0.82046545696302,0.756215088665154,1.72893131160545,0.484426936895553,0,0.490738592505128,0.589848616738702,0.366857197043358,0.808679663052368,0,0,0.397832444232549,0.82731361184183,0.60511520611056,0,0.785720083444267,0.655087670040387,0.443568258651136,0.87798860003913,0,2.06686796501184,1.33173201407204,0,0.548257766857182,0,1.58284119923659,0.511049710558381,0,2.35398605553177,1.21393120847326,3.41493287026946,0.177404740325278,2.65038171378292,1.02892805662451,1.15548546060614,1.31545547125698,2.00929529502746,1.4460082245969,0.313972371402056,0.785577949580009,0,0,4.10262423315381,2.8665101273223,1.1436247068265,0.790068058663633,0.23248285073625,1.04314963381548,0,0.62164849248911,0.51215543128185,1.38251932362818,2.58136415292167,0.473328002922261,0.852134047591577,1.27016115057279,0.4582137370881,0,0,0.223710863595585,0.785201868921944,1.09726132484042,0,0.307988420568741,0,0,3.50909195193158,7.36117868097062,0.594600453887843,0.90356865631168,1.20934568419972,1.66059127923341,0.848915739187391,0,4.70317296361523,0.245148321753905,0.471353094203252,0.588925401344836,1.48523200163543,0.4226557275834,0,1.78569444161722,3.02952073475813,0.699588091474503,0.357107877211315,2.82315897372553,0.722172300202514,0,0.917458566809082,1.29005624836306,0.473314686579554,1.8357702351547,0.872701380680755,0,0.743990036333503,0,0,0.378499274505237,1.09265571963696,1.77377901416012,0.61193297845189,1.60330443159336,4.5028500772074,0.250707539292375,0.985123076837112,1.07185652062471,0,0.930896962757057,0.213233981900981,0,2.0668451147522,8.44216114423667,2.01837352645104,0.25458863311266,0.202117188958219,1.08858373948481,1.02669990325584,1.21233695426258,0.573777643141411,0,0.651226148887796,0.533636729388577,0,0.359300808426348,0,0.366724332548599,0,1.99727032255654,1.61019034872821,1.9234109538194 | |||
|short_description=p@chr20:34330534..34330580,+ | |||
}} |
Revision as of 10:59, 21 January 2014
Short description: | p@chr20:34330534..34330580, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:34330534..34330580, + |
Coexpression cluster: | C875_Eosinophils_Neutrophils_Mast_CD19_CD14_Basophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.34e-25 | 98 |
blood island | 3.34e-25 | 98 |
hemolymphoid system | 1.36e-23 | 108 |
bone marrow | 4.02e-19 | 76 |
immune system | 6.09e-18 | 93 |
bone element | 2.14e-16 | 82 |
skeletal element | 2.23e-15 | 90 |
connective tissue | 1.62e-13 | 371 |
skeletal system | 8.96e-12 | 100 |
lateral plate mesoderm | 1.84e-10 | 203 |
blood | 4.71e-07 | 15 |
haemolymphatic fluid | 4.71e-07 | 15 |
organism substance | 4.71e-07 | 15 |