FFCP PHASE1:Mm9::chr11:70468102..70468118,-: Difference between revisions
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{{FFCP|EntrezGene=18643|HGNC=|MCL_coexpression_id=116|UniProt=Q5SX49|association_with_transcript=-2bp_to_ENSMUST00000108549_5end|description=CAGE_peak_2_at_Pfn1_5end|id=chr11:70468102..70468118,-|ontology_enrichment_celltype=CL:0000988!2.22e-13!32;CL:0002032!2.22e-13!32;CL:0000037!2.22e-13!32;CL:0000566!2.22e-13!32;CL:0000837!2.22e-13!32;CL:0000219!7.64e-13!54;CL:0002320!3.87e-12!46;CL:0000134!3.87e-12!46;CL:0002031!9.68e-12!25;CL:0000063!8.55e-10!66;CL:0000738!4.03e-09!17;CL:0002087!4.03e-09!17;CL:0000049!1.52e-07!19;CL:0000542!4.14e-07!13;CL:0000051!4.14e-07!13;CL:0000838!4.22e-07!12;CL:0000763!5.79e-07!16|ontology_enrichment_celltype_v019_2=CL:0000988,2.22e-13,32;CL:0002032,2.22e-13,32;CL:0000037,2.22e-13,32;CL:0000837,2.22e-13,32;CL:0000219,7.64e-13,54;CL:0002320,3.87e-12,46;CL:0000134,3.87e-12,46;CL:0002031,9.68e-12,25;CL:0000738,4.03e-09,17;CL:0002087,4.03e-09,17;CL:0000049,1.52e-07,19;CL:0000542,4.14e-07,13;CL:0000051,4.14e-07,13;CL:0000838,4.22e-07,12;CL:0000763,5.79e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.50e-15!48;UBERON:0002390!2.48e-13!45;UBERON:0003061!2.48e-13!45;UBERON:0002384!3.87e-12!46;UBERON:0001007!4.87e-10!128;UBERON:0001555!4.87e-10!128;UBERON:0007026!4.87e-10!128;UBERON:0004119!6.00e-10!130;UBERON:0000925!6.00e-10!130;UBERON:0006595!6.00e-10!130;UBERON:0004921!3.16e-09!126;UBERON:0004185!3.16e-09!126;UBERON:0002405!3.19e-09!70;UBERON:0003081!1.10e-08!88;UBERON:0002371!1.88e-07!16;UBERON:0004177!3.58e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.50e-15,48;UBERON:0002405,4.50e-15,48;UBERON:0002390,2.48e-13,45;UBERON:0003061,2.48e-13,45;UBERON:0002384,3.87e-12,46;UBERON:0001007,1.57e-11,116;UBERON:0001555,1.57e-11,116;UBERON:0007026,1.57e-11,116;UBERON:0004119,2.08e-11,118;UBERON:0000925,2.08e-11,118;UBERON:0006595,2.08e-11,118;UBERON:0004921,1.19e-10,114;UBERON:0005409,7.97e-09,47;UBERON:0003081,3.03e-08,87;UBERON:0002371,1.88e-07,16;UBERON:0004177,3.58e-07,29;UBERON:0005057,3.58e-07,29|phase1_expression=232.215828301951,819.39425713722,843.11359058881,385.641869416208,439.786450892893,578.34409173646,695.46483105288,1470.19816070579,1292.4404693523,1452.37038582797,956.08113457122,945.379856253732,1355.90978105515,1545.2430331582,533.974948190507,575.839660456665,435.127488195707,1402.7025182654,1256.92801286381,1245.15923837542,255.640130194116,661.873480705101,615.647903000471,1211.94260266006,1209.21632050505,996.866689703675,1057.08993857437,1017.0242182774,997.432928726507,763.39926304283,1113.97408553225,1042.08533514725,1133.56440351836,871.649245584913,457.540965686019,541.758709223327,480.00215657283,3947.17180947978,3383.18204178806,2814.98717134711,3774.68145869502,3866.0374448648,3229.1293580102,370.136644848197,348.73664339513,363.055475775806,1254.95571633425,502.76601061331,477.597761264742,365.917070057801,451.036250476918,639.698911424123,1219.10841561551,1155.50189222407,1237.16127464341,1187.2522973059,683.668787693874,711.111815250593,332.405945192319,367.119739614791,339.733632279312,744.441436955883,665.192507491132,2467.97497464424,2932.97763137365,2867.49774392246,1104.62560748136,1116.92261356976,295.308015854544,321.854156982751,299.292420003017,335.639906674469,355.598350932098,296.917697297049,293.287141315803,279.442511129446,181.691203648991,175.059340514792,170.042432314662,321.011224335292,326.061961798988,283.897786953434,182.585681346903,164.326682129251,167.314081315607,279.897156199984,265.665556371126,293.206328283198,778.162362691799,716.493961372434,415.085947820803,370.842690978978,339.305695520167,240.707623470466,211.82711208794,212.812771371234,394.508376150091,809.03274127804,653.621587580818,662.511702206888,257.743458191325,263.069278699352,145.238986632788,120.881339536066,410.899995839284,425.897933863641,395.825640446575,385.941513450423,2603.62042007231,350.323448192986,403.873840711564,408.592671894893,336.698625993845,309.132135773429,274.804808576142,265.156507705615,544.570513918826,531.258037323755,1303.03134302216,397.784684020679,475.250947726767,389.354828267583,1010.24334580222,137.606974595427,99.4871857363912,969.459524516604,583.379841219326,1040.83123827356,613.495056308756,167.166353575782,184.372742935906,220.146424901738,195.204711575926,148.826396166252,214.229473940906,152.993511072895,340.143475260056,500.738056705624,430.639580370982,249.794482937245,496.66973078864,462.792936224581,540.006327286242,275.789816639359,245.203542941386,289.79323528433,232.848785530926,250.942269616845,899.565234508751,600.97912277333,525.390056753551,556.75716036604,370.915030466948,432.180938654009,347.154464120201,283.424795949534,881.979763265423,891.967846059603,674.319984065741,722.661820376366,641.194247988317,482.386262654059,655.072683364277,488.368823197056,448.300230050721,397.167977633697,405.897656317624,283.039189898019,285.511339599889,312.410684142518,254.393924354895,225.732780584713,330.862023743613,194.465100783779,268.119684419262,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18643 | |||
|HGNC= | |||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5SX49 | |||
|association_with_transcript=-2bp_to_ENSMUST00000108549_5end | |||
|cluster_id=chr11:70468102..70468118,- | |||
|description=CAGE_peak_2_at_Pfn1_5end | |||
|id=chr11:70468102..70468118,- | |||
|ontology_enrichment_celltype=CL:0000988!2.22e-13!32;CL:0002032!2.22e-13!32;CL:0000037!2.22e-13!32;CL:0000566!2.22e-13!32;CL:0000837!2.22e-13!32;CL:0000219!7.64e-13!54;CL:0002320!3.87e-12!46;CL:0000134!3.87e-12!46;CL:0002031!9.68e-12!25;CL:0000063!8.55e-10!66;CL:0000738!4.03e-09!17;CL:0002087!4.03e-09!17;CL:0000049!1.52e-07!19;CL:0000542!4.14e-07!13;CL:0000051!4.14e-07!13;CL:0000838!4.22e-07!12;CL:0000763!5.79e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.22e-13,32;CL:0002032,2.22e-13,32;CL:0000037,2.22e-13,32;CL:0000837,2.22e-13,32;CL:0000219,7.64e-13,54;CL:0002320,3.87e-12,46;CL:0000134,3.87e-12,46;CL:0002031,9.68e-12,25;CL:0000738,4.03e-09,17;CL:0002087,4.03e-09,17;CL:0000049,1.52e-07,19;CL:0000542,4.14e-07,13;CL:0000051,4.14e-07,13;CL:0000838,4.22e-07,12;CL:0000763,5.79e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.50e-15!48;UBERON:0002390!2.48e-13!45;UBERON:0003061!2.48e-13!45;UBERON:0002384!3.87e-12!46;UBERON:0001007!4.87e-10!128;UBERON:0001555!4.87e-10!128;UBERON:0007026!4.87e-10!128;UBERON:0004119!6.00e-10!130;UBERON:0000925!6.00e-10!130;UBERON:0006595!6.00e-10!130;UBERON:0004921!3.16e-09!126;UBERON:0004185!3.16e-09!126;UBERON:0002405!3.19e-09!70;UBERON:0003081!1.10e-08!88;UBERON:0002371!1.88e-07!16;UBERON:0004177!3.58e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.50e-15,48;UBERON:0002405,4.50e-15,48;UBERON:0002390,2.48e-13,45;UBERON:0003061,2.48e-13,45;UBERON:0002384,3.87e-12,46;UBERON:0001007,1.57e-11,116;UBERON:0001555,1.57e-11,116;UBERON:0007026,1.57e-11,116;UBERON:0004119,2.08e-11,118;UBERON:0000925,2.08e-11,118;UBERON:0006595,2.08e-11,118;UBERON:0004921,1.19e-10,114;UBERON:0005409,7.97e-09,47;UBERON:0003081,3.03e-08,87;UBERON:0002371,1.88e-07,16;UBERON:0004177,3.58e-07,29;UBERON:0005057,3.58e-07,29 | |||
|phase1_expression=232.215828301951,819.39425713722,843.11359058881,385.641869416208,439.786450892893,578.34409173646,695.46483105288,1470.19816070579,1292.4404693523,1452.37038582797,956.08113457122,945.379856253732,1355.90978105515,1545.2430331582,533.974948190507,575.839660456665,435.127488195707,1402.7025182654,1256.92801286381,1245.15923837542,255.640130194116,661.873480705101,615.647903000471,1211.94260266006,1209.21632050505,996.866689703675,1057.08993857437,1017.0242182774,997.432928726507,763.39926304283,1113.97408553225,1042.08533514725,1133.56440351836,871.649245584913,457.540965686019,541.758709223327,480.00215657283,3947.17180947978,3383.18204178806,2814.98717134711,3774.68145869502,3866.0374448648,3229.1293580102,370.136644848197,348.73664339513,363.055475775806,1254.95571633425,502.76601061331,477.597761264742,365.917070057801,451.036250476918,639.698911424123,1219.10841561551,1155.50189222407,1237.16127464341,1187.2522973059,683.668787693874,711.111815250593,332.405945192319,367.119739614791,339.733632279312,744.441436955883,665.192507491132,2467.97497464424,2932.97763137365,2867.49774392246,1104.62560748136,1116.92261356976,295.308015854544,321.854156982751,299.292420003017,335.639906674469,355.598350932098,296.917697297049,293.287141315803,279.442511129446,181.691203648991,175.059340514792,170.042432314662,321.011224335292,326.061961798988,283.897786953434,182.585681346903,164.326682129251,167.314081315607,279.897156199984,265.665556371126,293.206328283198,778.162362691799,716.493961372434,415.085947820803,370.842690978978,339.305695520167,240.707623470466,211.82711208794,212.812771371234,394.508376150091,809.03274127804,653.621587580818,662.511702206888,257.743458191325,263.069278699352,145.238986632788,120.881339536066,410.899995839284,425.897933863641,395.825640446575,385.941513450423,2603.62042007231,350.323448192986,403.873840711564,408.592671894893,336.698625993845,309.132135773429,274.804808576142,265.156507705615,544.570513918826,531.258037323755,1303.03134302216,397.784684020679,475.250947726767,389.354828267583,1010.24334580222,137.606974595427,99.4871857363912,969.459524516604,583.379841219326,1040.83123827356,613.495056308756,167.166353575782,184.372742935906,220.146424901738,195.204711575926,148.826396166252,214.229473940906,152.993511072895,340.143475260056,500.738056705624,430.639580370982,249.794482937245,496.66973078864,462.792936224581,540.006327286242,275.789816639359,245.203542941386,289.79323528433,232.848785530926,250.942269616845,899.565234508751,600.97912277333,525.390056753551,556.75716036604,370.915030466948,432.180938654009,347.154464120201,283.424795949534,881.979763265423,891.967846059603,674.319984065741,722.661820376366,641.194247988317,482.386262654059,655.072683364277,488.368823197056,448.300230050721,397.167977633697,405.897656317624,283.039189898019,285.511339599889,312.410684142518,254.393924354895,225.732780584713,330.862023743613,194.465100783779,268.119684419262,262.303856954796,1005.13393783671,899.396377222714,604.458902016853,483.516750813433,661.476678966305,691.774489458065,671.581692411508,696.606242824192,749.755917240328,665.548476039728,451.146699796484,563.842641764621,543.364910800988,716.359068697415,747.189238416818,675.487198878814,1019.46496762281,428.317673773873,678.500568751944,431.333512376376,378.595254951205,334.6881325166,359.057057791533,273.964434650142,279.457735557647,285.541037315046,335.88082648974,703.585810804769,629.971579337816,655.697919714233,611.014685622171,573.036931571742,541.079935035517,522.743881748123,357.508175038953,422.824576309645,291.84945925053,434.660626876812,346.049779484048,333.909276646082,299.952475408637,313.588288886189,693.563475885434,596.897947077027,752.083366279949,503.973159666534,544.716066277613,647.914203784943,729.603759315632,489.200055179502,596.806655586039,551.004147846152,491.280142233718,461.275230924802,491.806828354071,436.550858799002,1028.39655646584,1125.88476550473,352.594983754649,457.227188626942,186.399234975826,143.467104388857,543.608278869056,157.03691672112,470.107246930222,473.211758087526,348.124210736203,418.673334012871,401.928808044639,355.827199201562,441.243664825635,370.872683689455,317.811373469005,186.045042208226,389.625533896697,333.694941272436,294.336735551912,486.166952400062,313.278526482312,572.719520689601,480.694455573954,474.718985745596,689.825221769485,472.83525753776,387.384011459164,378.438612386083,348.297938681873,352.697021856371,226.650008436247,256.807502687985,253.627506286572,374.166953397063,527.007277730942,390.093403757498,390.680534713929,328.555362023014,290.429021362744,401.589267882156,621.645354660769,325.797724988555,326.602557519399,496.142735100913,340.044082621577,390.345250135025,352.148414809253,329.759067587828,626.392317917549,215.835051540233,840.855604406233,584.900383807773,594.659627384144,656.840809575358,669.528327377581,690.452526737285,686.542878745182,721.589688180781,682.016870724831,1015.76953756808,803.9679276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| |||
|short_description=p2@Pfn1 | |||
}} |
Revision as of 21:35, 3 August 2015
Short description: | p2@Pfn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pfn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | -2bp_to_ENSMUST00000108549_5end |
EntrezGene: | 18643 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.22e-13 | 32 |
hematopoietic oligopotent progenitor cell | 2.22e-13 | 32 |
hematopoietic stem cell | 2.22e-13 | 32 |
hematopoietic multipotent progenitor cell | 2.22e-13 | 32 |
motile cell | 7.64e-13 | 54 |
connective tissue cell | 3.87e-12 | 46 |
mesenchymal cell | 3.87e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 9.68e-12 | 25 |
leukocyte | 4.03e-09 | 17 |
nongranular leukocyte | 4.03e-09 | 17 |
common myeloid progenitor | 1.52e-07 | 19 |
lymphocyte | 4.14e-07 | 13 |
common lymphoid progenitor | 4.14e-07 | 13 |
lymphoid lineage restricted progenitor cell | 4.22e-07 | 12 |
myeloid cell | 5.79e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.50e-15 | 48 |
immune system | 4.50e-15 | 48 |
hematopoietic system | 2.48e-13 | 45 |
blood island | 2.48e-13 | 45 |
connective tissue | 3.87e-12 | 46 |
digestive system | 1.57e-11 | 116 |
digestive tract | 1.57e-11 | 116 |
primitive gut | 1.57e-11 | 116 |
endoderm-derived structure | 2.08e-11 | 118 |
endoderm | 2.08e-11 | 118 |
presumptive endoderm | 2.08e-11 | 118 |
subdivision of digestive tract | 1.19e-10 | 114 |
gastrointestinal system | 7.97e-09 | 47 |
lateral plate mesoderm | 3.03e-08 | 87 |
bone marrow | 1.88e-07 | 16 |
hemopoietic organ | 3.58e-07 | 29 |
immune organ | 3.58e-07 | 29 |