FFCP PHASE1:Mm9::chr14:57750908..57750926,-: Difference between revisions
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{{FFCP|EntrezGene=14623|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=-12bp_to_ENSMUST00000162931_5end|description=CAGE_peak_10_at_Gjb6_5end|id=chr14:57750908..57750926,-|ontology_enrichment_celltype=CL:0000117!1.83e-07!23;CL:0000337!1.83e-07!23;CL:0002614!5.65e-07!3|ontology_enrichment_celltype_v019_2=CL:0002614,1.46e-11,3;CL:0002610,6.64e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.56e-38!52;UBERON:0005068!1.56e-38!52;UBERON:0006241!1.56e-38!52;UBERON:0007135!1.56e-38!52;UBERON:0000955!1.74e-38!50;UBERON:0006238!1.74e-38!50;UBERON:0002616!6.64e-37!49;UBERON:0001017!2.24e-34!73;UBERON:0005743!2.24e-34!73;UBERON:0000073!3.47e-33!75;UBERON:0001016!3.47e-33!75;UBERON:0000033!1.26e-28!63;UBERON:0003080!6.89e-27!40;UBERON:0002346!1.06e-25!71;UBERON:0003075!1.06e-25!71;UBERON:0007284!1.06e-25!71;UBERON:0004121!1.14e-25!102;UBERON:0000924!1.14e-25!102;UBERON:0006601!1.14e-25!102;UBERON:0002780!3.09e-25!39;UBERON:0001890!3.09e-25!39;UBERON:0006240!3.09e-25!39;UBERON:0003056!1.34e-20!49;UBERON:0002020!1.01e-18!34;UBERON:0007811!1.65e-18!86;UBERON:0000153!2.76e-17!94;UBERON:0002021!7.61e-17!10;UBERON:0000411!7.61e-17!10;UBERON:0001950!7.61e-17!10;UBERON:0002791!1.26e-14!29;UBERON:0003528!1.26e-14!29;UBERON:0001893!1.26e-14!29;UBERON:0002298!1.17e-12!6;UBERON:0000025!1.63e-12!114;UBERON:0001894!2.25e-12!10;UBERON:0006222!2.25e-12!10;UBERON:0003076!1.07e-11!12;UBERON:0003057!1.07e-11!12;UBERON:0004111!4.24e-11!122;UBERON:0002619!4.48e-11!17;UBERON:0000956!2.49e-10!21;UBERON:0001869!2.49e-10!21;UBERON:0000203!2.49e-10!21;UBERON:0000007!4.30e-09!8;UBERON:0003296!4.30e-09!8;UBERON:0010133!4.30e-09!8;UBERON:0002950!8.06e-09!4;UBERON:0001891!8.06e-09!4;UBERON:0009616!8.06e-09!4;UBERON:0000475!7.74e-08!200;UBERON:0002240!2.66e-07!6;UBERON:0005174!2.66e-07!6;UBERON:0001137!2.66e-07!6;UBERON:0002038!5.65e-07!3;UBERON:0002308!5.65e-07!3;UBERON:0009663!5.65e-07!3;UBERON:0009661!5.65e-07!3;UBERON:0006331!5.65e-07!3;UBERON:0000125!5.65e-07!3;UBERON:0000477!5.82e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.41e-30,54;UBERON:0000955,1.02e-28,47;UBERON:0006238,1.02e-28,47;UBERON:0002616,1.42e-26,46;UBERON:0001049,7.00e-26,52;UBERON:0005068,7.00e-26,52;UBERON:0006241,7.00e-26,52;UBERON:0007135,7.00e-26,52;UBERON:0001017,9.86e-26,73;UBERON:0001016,6.17e-25,75;UBERON:0002346,2.65e-20,64;UBERON:0003075,2.65e-20,64;UBERON:0007284,2.65e-20,64;UBERON:0002021,1.51e-19,10;UBERON:0000411,1.51e-19,10;UBERON:0001950,1.51e-19,10;UBERON:0004121,8.32e-19,95;UBERON:0000924,8.32e-19,95;UBERON:0006601,8.32e-19,95;UBERON:0003080,1.00e-18,40;UBERON:0010371,2.57e-17,73;UBERON:0003528,3.66e-17,29;UBERON:0002791,3.66e-17,29;UBERON:0001893,3.66e-17,29;UBERON:0002780,1.20e-16,39;UBERON:0001890,1.20e-16,39;UBERON:0006240,1.20e-16,39;UBERON:0002950,5.90e-15,4;UBERON:0001891,5.90e-15,4;UBERON:0009616,5.90e-15,4;UBERON:0010286,5.90e-15,4;UBERON:0003056,1.01e-14,49;UBERON:0002020,2.78e-14,34;UBERON:0002619,4.10e-14,17;UBERON:0000956,5.92e-14,21;UBERON:0001869,5.92e-14,21;UBERON:0000203,5.92e-14,21;UBERON:0010314,6.35e-13,92;UBERON:0002038,1.46e-11,3;UBERON:0009663,1.46e-11,3;UBERON:0009661,1.46e-11,3;UBERON:0000125,1.46e-11,3;UBERON:0002308,1.46e-11,3;UBERON:0004684,6.64e-11,3;UBERON:0002275,6.64e-11,3;UBERON:0004733,2.82e-10,6;UBERON:0004732,2.82e-10,6;UBERON:0002028,2.82e-10,6;UBERON:0007277,2.82e-10,6;UBERON:0000025,1.17e-09,114;UBERON:0004111,9.28e-09,122;UBERON:0001896,9.85e-09,2;UBERON:0002298,9.85e-09,2;UBERON:0005290,9.85e-09,2;UBERON:0010096,9.85e-09,2;UBERON:0003076,1.05e-07,12;UBERON:0003057,1.05e-07,12;UBERON:0011216,5.83e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699932108126813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.883474163806454,0,0,0,2.20231761998777,3.57524546638526,2.4577045320999,0,0.0914876436024097,0,3.07101298901519,5.06486349028512,3.66715794664344,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9772735491963,3.35114730901528,0,0,0,0,4.94309110035915,0.457500602818626,0,3.12883776346098,4.34716277461562,3.94797284663164,2.43361894601636,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13761887960934,5.86058432961016,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.643011105094777,0.709360934569094,0.356737635204141,0.658196082408484,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0,0,0.328281799490123,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.84130094602871,1.71868654031819,1.54667864109319,1.37016503954128,2.2661816921691,0.675022500231806,2.70192721934532,1.81256963593682,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p10@Gjb6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14623 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENSMUST00000162931_5end | |||
|cluster_id=chr14:57750908..57750926,- | |||
|description=CAGE_peak_10_at_Gjb6_5end | |||
|id=chr14:57750908..57750926,- | |||
|ontology_enrichment_celltype=CL:0000117!1.83e-07!23;CL:0000337!1.83e-07!23;CL:0002614!5.65e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.46e-11,3;CL:0002610,6.64e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.56e-38!52;UBERON:0005068!1.56e-38!52;UBERON:0006241!1.56e-38!52;UBERON:0007135!1.56e-38!52;UBERON:0000955!1.74e-38!50;UBERON:0006238!1.74e-38!50;UBERON:0002616!6.64e-37!49;UBERON:0001017!2.24e-34!73;UBERON:0005743!2.24e-34!73;UBERON:0000073!3.47e-33!75;UBERON:0001016!3.47e-33!75;UBERON:0000033!1.26e-28!63;UBERON:0003080!6.89e-27!40;UBERON:0002346!1.06e-25!71;UBERON:0003075!1.06e-25!71;UBERON:0007284!1.06e-25!71;UBERON:0004121!1.14e-25!102;UBERON:0000924!1.14e-25!102;UBERON:0006601!1.14e-25!102;UBERON:0002780!3.09e-25!39;UBERON:0001890!3.09e-25!39;UBERON:0006240!3.09e-25!39;UBERON:0003056!1.34e-20!49;UBERON:0002020!1.01e-18!34;UBERON:0007811!1.65e-18!86;UBERON:0000153!2.76e-17!94;UBERON:0002021!7.61e-17!10;UBERON:0000411!7.61e-17!10;UBERON:0001950!7.61e-17!10;UBERON:0002791!1.26e-14!29;UBERON:0003528!1.26e-14!29;UBERON:0001893!1.26e-14!29;UBERON:0002298!1.17e-12!6;UBERON:0000025!1.63e-12!114;UBERON:0001894!2.25e-12!10;UBERON:0006222!2.25e-12!10;UBERON:0003076!1.07e-11!12;UBERON:0003057!1.07e-11!12;UBERON:0004111!4.24e-11!122;UBERON:0002619!4.48e-11!17;UBERON:0000956!2.49e-10!21;UBERON:0001869!2.49e-10!21;UBERON:0000203!2.49e-10!21;UBERON:0000007!4.30e-09!8;UBERON:0003296!4.30e-09!8;UBERON:0010133!4.30e-09!8;UBERON:0002950!8.06e-09!4;UBERON:0001891!8.06e-09!4;UBERON:0009616!8.06e-09!4;UBERON:0000475!7.74e-08!200;UBERON:0002240!2.66e-07!6;UBERON:0005174!2.66e-07!6;UBERON:0001137!2.66e-07!6;UBERON:0002038!5.65e-07!3;UBERON:0002308!5.65e-07!3;UBERON:0009663!5.65e-07!3;UBERON:0009661!5.65e-07!3;UBERON:0006331!5.65e-07!3;UBERON:0000125!5.65e-07!3;UBERON:0000477!5.82e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.41e-30,54;UBERON:0000955,1.02e-28,47;UBERON:0006238,1.02e-28,47;UBERON:0002616,1.42e-26,46;UBERON:0001049,7.00e-26,52;UBERON:0005068,7.00e-26,52;UBERON:0006241,7.00e-26,52;UBERON:0007135,7.00e-26,52;UBERON:0001017,9.86e-26,73;UBERON:0001016,6.17e-25,75;UBERON:0002346,2.65e-20,64;UBERON:0003075,2.65e-20,64;UBERON:0007284,2.65e-20,64;UBERON:0002021,1.51e-19,10;UBERON:0000411,1.51e-19,10;UBERON:0001950,1.51e-19,10;UBERON:0004121,8.32e-19,95;UBERON:0000924,8.32e-19,95;UBERON:0006601,8.32e-19,95;UBERON:0003080,1.00e-18,40;UBERON:0010371,2.57e-17,73;UBERON:0003528,3.66e-17,29;UBERON:0002791,3.66e-17,29;UBERON:0001893,3.66e-17,29;UBERON:0002780,1.20e-16,39;UBERON:0001890,1.20e-16,39;UBERON:0006240,1.20e-16,39;UBERON:0002950,5.90e-15,4;UBERON:0001891,5.90e-15,4;UBERON:0009616,5.90e-15,4;UBERON:0010286,5.90e-15,4;UBERON:0003056,1.01e-14,49;UBERON:0002020,2.78e-14,34;UBERON:0002619,4.10e-14,17;UBERON:0000956,5.92e-14,21;UBERON:0001869,5.92e-14,21;UBERON:0000203,5.92e-14,21;UBERON:0010314,6.35e-13,92;UBERON:0002038,1.46e-11,3;UBERON:0009663,1.46e-11,3;UBERON:0009661,1.46e-11,3;UBERON:0000125,1.46e-11,3;UBERON:0002308,1.46e-11,3;UBERON:0004684,6.64e-11,3;UBERON:0002275,6.64e-11,3;UBERON:0004733,2.82e-10,6;UBERON:0004732,2.82e-10,6;UBERON:0002028,2.82e-10,6;UBERON:0007277,2.82e-10,6;UBERON:0000025,1.17e-09,114;UBERON:0004111,9.28e-09,122;UBERON:0001896,9.85e-09,2;UBERON:0002298,9.85e-09,2;UBERON:0005290,9.85e-09,2;UBERON:0010096,9.85e-09,2;UBERON:0003076,1.05e-07,12;UBERON:0003057,1.05e-07,12;UBERON:0011216,5.83e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699932108126813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.883474163806454,0,0,0,2.20231761998777,3.57524546638526,2.4577045320999,0,0.0914876436024097,0,3.07101298901519,5.06486349028512,3.66715794664344,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9772735491963,3.35114730901528,0,0,0,0,4.94309110035915,0.457500602818626,0,3.12883776346098,4.34716277461562,3.94797284663164,2.43361894601636,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13761887960934,5.86058432961016,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.643011105094777,0.709360934569094,0.356737635204141,0.658196082408484,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0,0,0.328281799490123,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.84130094602871,1.71868654031819,1.54667864109319,1.37016503954128,2.2661816921691,0.675022500231806,2.70192721934532,1.81256963593682,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@Gjb6 | |||
}} |
Revision as of 13:28, 4 August 2015
Short description: | p10@Gjb6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Gjb6_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -12bp_to_ENSMUST00000162931_5end |
EntrezGene: | 14623 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.46e-11 | 3 |
raphe nuclei neuron | 6.64e-11 | 3 |