FFCP PHASE1:Hg19::chr4:40632704..40632737,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54502 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30358 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z8Z7 | |||
|association_with_transcript=-64bp_to_ENST00000514014,uc011bys.1_5end | |||
|description=CAGE_peak_8_at_RBM47_5end | |||
|id=chr4:40632704..40632737,- | |||
|ontology_enrichment_celltype=CL:0000066!1.43e-12!254;CL:0002009!2.03e-10!65;CL:0000766!4.02e-10!76;CL:0000557!1.58e-09!71;CL:0002076!1.67e-09!43;CL:0002194!2.15e-09!63;CL:0000576!2.15e-09!63;CL:0000040!2.15e-09!63;CL:0000559!2.15e-09!63;CL:0000860!3.46e-09!45;CL:0000039!1.40e-08!7;CL:0000586!1.40e-08!7;CL:0000223!2.56e-08!59;CL:0000839!2.72e-08!70;CL:0002057!7.73e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.43e-14;7!CL:0000586;2.43e-14;7!CL:0002322;1.07e-10;5!CL:0002076;3.68e-08;42!CL:0000840;6.63e-08;5!CL:0002368;4.31e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.13e-14,7;CL:0000586,2.13e-14,7;CL:0000066,9.31e-13,253;CL:0002322,1.09e-10,5;CL:0000223,2.22e-10,58;CL:0002076,2.04e-09,42;CL:0000840,7.50e-08,5;CL:0001029,7.50e-08,5;CL:0002368,7.54e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.48e-08;10!UBERON:0005564;1.48e-08;10!UBERON:0001041;2.14e-08;30!UBERON:0008947;5.16e-07;29 | |||
|ontology_enrichment_disease=DOID:305!2.58e-20!106;DOID:0050687!2.11e-13!143 | |||
|ontology_enrichment_disease_v019=DOID:305;5.61e-08;106!DOID:1749;6.05e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.35e-21,106;DOID:0050687,2.99e-16,143;DOID:1749,6.29e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.28e-14!72;UBERON:0004119!1.80e-13!169;UBERON:0000925!1.80e-13!169;UBERON:0006595!1.80e-13!169;UBERON:0001007!2.05e-12!155;UBERON:0001555!2.05e-12!155;UBERON:0007026!2.05e-12!155;UBERON:0000065!2.61e-12!53;UBERON:0004921!1.63e-10!129;UBERON:0004185!1.63e-10!129;UBERON:0000077!2.17e-10!130;UBERON:0001041!2.55e-10!98;UBERON:0000464!4.59e-10!104;UBERON:0008947!8.53e-10!38;UBERON:0003258!8.53e-10!38;UBERON:0000062!2.82e-09!511;UBERON:0000466!3.27e-09!126;UBERON:0000072!1.46e-08!46;UBERON:0005178!2.53e-08!34;UBERON:0002224!2.53e-08!34;UBERON:0002390!4.54e-08!102;UBERON:0003061!4.54e-08!102;UBERON:0005181!7.03e-08!35;UBERON:0000922!1.19e-07!612;UBERON:0002048!3.30e-07!22;UBERON:0000117!3.30e-07!22;UBERON:0000171!3.30e-07!22;UBERON:0000170!3.30e-07!22;UBERON:0005597!3.30e-07!22;UBERON:0000118!3.30e-07!22;UBERON:0002371!3.74e-07!80;UBERON:0005911!6.12e-07!82;UBERON:0005177!9.22e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;9.90e-10;6!UBERON:0002048;1.82e-08;22!UBERON:0000117;1.82e-08;22!UBERON:0000171;1.82e-08;22!UBERON:0000170;1.82e-08;22!UBERON:0005178;8.40e-08;34!UBERON:0002224;8.40e-08;34!UBERON:0000161;1.54e-07;19!UBERON:0000166;1.54e-07;19!UBERON:0003343;2.79e-07;4!UBERON:0004785;2.79e-07;4!UBERON:0005181;4.74e-07;35!UBERON:0000065;4.85e-07;44!UBERON:0001004;5.85e-07;65!UBERON:0004807;5.87e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.09e-14,74;UBERON:0004119,7.52e-13,160;UBERON:0000925,7.52e-13,160;UBERON:0006595,7.52e-13,160;UBERON:0001007,1.53e-11,145;UBERON:0001555,1.53e-11,145;UBERON:0007026,1.53e-11,145;UBERON:0001041,1.15e-10,87;UBERON:0000065,3.02e-10,54;UBERON:0005911,7.70e-09,82;UBERON:0005178,9.72e-09,34;UBERON:0002224,9.72e-09,34;UBERON:0008947,1.94e-08,38;UBERON:0003258,1.94e-08,38;UBERON:0002048,2.17e-08,22;UBERON:0000117,2.17e-08,22;UBERON:0000171,2.17e-08,22;UBERON:0000170,2.17e-08,22;UBERON:0005597,2.17e-08,22;UBERON:0000118,2.17e-08,22;UBERON:0005181,2.23e-08,35;UBERON:0005177,2.63e-08,101;UBERON:0004921,3.38e-08,118;UBERON:0000166,1.22e-07,22;UBERON:0003343,2.30e-07,4;UBERON:0004785,2.30e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0.464448369948228,0,1.204823675113,1.10926203050036,0,0,0,0.553995408531877,0.401088894940283,0,0.223915474239924,0.647787332037959,0,0.436194716338694,0,0.727752183563449,0.464858073811369,0.411167888021826,0.619412741790207,0.575384784644301,1.2808035326455,1.89185783910868,0.689491361473237,0,0,0.564727018627814,0,0.674170453335254,0.612167784741805,0.641858054152187,0,1.9791078011203,0.997318288108159,1.27867425159808,0.870627715885752,0.56738522469114,0.622822248995575,1.00499466102697,0.521482918420201,1.3031330682307,0.605399502633369,1.10483290796269,1.58231193720442,0,0,0.209658645508376,0,0.300353785683013,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.263504357079378,0.851363990735132,2.18577172975525,1.48313777113772,4.21911611751088,6.44280028007289,3.19099105245276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.09098448236334,1.43402297694502,10.1238176087564,6.62648841607426,6.50686080069303,5.39037486079926,6.05570042101508,1.45990943630332,0,0,0,0,0,0,0.337169380156203,0.723033089650446,0.330881918197182,0.435758888184812,0.474541238222193,0,1.17732879075208,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0.439001141634502,0,0.402115889646523,1.48141512253647,0,0,0,0,0,0,0,0,0,0.858486162094873,0.246217006087397,1.40402559083543,0.297262324577456,0,0,0.425325291727159,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,1.49801404789436,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,1.65745780084613,0,0,0,0.451199612907412,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,1.27438136522519,0,0.671624264166535,0,0,0.512900250232778,0.328014645699706,0,0.721287081534056,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.4875642382488,0.576570202095319,2.16941611240793,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,1.34060455107157,2.17781969722645,1.31801321087491,0,1.68471475667626,0,0.229723400206959,0,1.52927441428475,0.569647187174163,0,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,2.35012956480441,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0,0,0,0.19924798825107,0,2.01546198283421,0,0.246169610922139,0,2.06697207638852,10.9202916552122,0,0,0,0,0,0.0927680981618513,0,0.7812832832557,1.57427999993152,0,2.38966241399549,3.81380475439149,0.709163045303809,0,0,0,0,0,0,0,0,0,0.653630781113941,0.697118721393016,0.153900517007594,0,10.6059396018508,11.7582514176801,7.60531603454057,0.31900115973192,0.0915975934018623,2.13213910407454,0,0,0,0,0,0,0,0,0.843992258112108,1.95879369790977,0.141353071433941,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,1.17398771359254,0,0.789168805698781,1.20990716048664,0,0.126373159256976,1.20258735531594,1.9700756365477,0,0,0,0,3.13070500632772,0,0.173559738335131,0,0.957651272384428,1.22308667769421,0,1.25783230675811,0.65780385377567,1.14961639874493,0.775912131907355,0.529536760149002,0.90392296312213,0,0,0.0633107959558787,2.54216797555244,2.88571752905521,0.640358984218058,0,1.15272333723285,0,0,1.4405479798815,0,2.35694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0.134366944973453,0,4.65983798109815,0,0,0,3.24810688998671,0.508039992394707,0,0.272406812223151,9.48443575943613,8.66498450562573,8.3088067605837,1.349843349309,2.32140586367385,0,0,0.551639951094387,1.36381929150995,0,1.79287339332845,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39521573038061,2.11444506695002,1.49502377594773,1.72924735609633,2.07119527673598,0,0,0,3.83004754662109,0,0,0,0,2.51286554000375,0,0,0,0.573409195690071,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657852148736121,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,1.47918486351039,0,0,0,0,0,1.11903606175556,0.622077260032973,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,3.23887471053385,2.00548529691159,1.46742878817343,1.5018336599544,0,0,0,0.150420656698515,0,1.56302802246618,7.59529413996125,0,2.95712172434091,0,0,0,0,0,3.83780436800028,0,0,3.32182311862948,0,0,0,0,1.06442844195167,0,0,0.135939465953663,0,0.472775363535873,1.33477682270483,0.863424021355654,0,0.280272163313789,0.913158720509496,0,0.955503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| |||
|short_description=p8@RBM47 | |||
}} |
Revision as of 00:49, 22 January 2014
Short description: | p8@RBM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RBM47_5end |
Coexpression cluster: | NA |
Association with transcript: | -64bp_to_ENST00000514014, uc011bys.1_5end |
EntrezGene: | RBM47 |
HGNC: | 30358 |
UniProt: | B7Z8Z7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.13e-14 | 7 |
germ cell | 2.13e-14 | 7 |
epithelial cell | 9.31e-13 | 253 |
embryonic stem cell | 1.09e-10 | 5 |
endodermal cell | 2.22e-10 | 58 |
endo-epithelial cell | 2.04e-09 | 42 |
immature conventional dendritic cell | 7.50e-08 | 5 |
common dendritic progenitor | 7.50e-08 | 5 |
respiratory epithelial cell | 7.54e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.09e-14 | 74 |
endoderm-derived structure | 7.52e-13 | 160 |
endoderm | 7.52e-13 | 160 |
presumptive endoderm | 7.52e-13 | 160 |
digestive system | 1.53e-11 | 145 |
digestive tract | 1.53e-11 | 145 |
primitive gut | 1.53e-11 | 145 |
foregut | 1.15e-10 | 87 |
respiratory tract | 3.02e-10 | 54 |
endo-epithelium | 7.70e-09 | 82 |
thoracic cavity element | 9.72e-09 | 34 |
thoracic cavity | 9.72e-09 | 34 |
respiratory primordium | 1.94e-08 | 38 |
endoderm of foregut | 1.94e-08 | 38 |
lung | 2.17e-08 | 22 |
respiratory tube | 2.17e-08 | 22 |
respiration organ | 2.17e-08 | 22 |
pair of lungs | 2.17e-08 | 22 |
lung primordium | 2.17e-08 | 22 |
lung bud | 2.17e-08 | 22 |
thoracic segment organ | 2.23e-08 | 35 |
trunk region element | 2.63e-08 | 101 |
subdivision of digestive tract | 3.38e-08 | 118 |
oral opening | 1.22e-07 | 22 |
mucosa of oral region | 2.30e-07 | 4 |
respiratory system mucosa | 2.30e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.35e-21 | 106 |
cell type cancer | 2.99e-16 | 143 |
squamous cell carcinoma | 6.29e-07 | 14 |