FFCP PHASE1:Hg19::chr5:136649258..136649268,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6695 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11251 | |||
|TSSclassifier=strong | |||
|UniProt=D6RFX3 | |||
|association_with_transcript=-31bp_to_ENST00000510405_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_23_at_SPOCK1_5end | |||
|id=chr5:136649258..136649268,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.20e-48!57;UBERON:0005068!7.20e-48!57;UBERON:0006241!7.20e-48!57;UBERON:0007135!7.20e-48!57;UBERON:0002616!3.48e-46!59;UBERON:0001017!1.48e-44!82;UBERON:0000955!3.52e-43!69;UBERON:0006238!3.52e-43!69;UBERON:0005743!2.12e-42!86;UBERON:0003075!9.33e-39!86;UBERON:0007284!9.33e-39!86;UBERON:0000073!3.37e-38!94;UBERON:0001016!3.37e-38!94;UBERON:0002619!4.56e-38!22;UBERON:0002346!6.29e-37!90;UBERON:0002020!2.50e-35!34;UBERON:0003528!2.50e-35!34;UBERON:0007023!3.86e-35!115;UBERON:0001950!6.81e-34!20;UBERON:0000956!1.62e-33!25;UBERON:0000203!1.62e-33!25;UBERON:0001869!1.61e-31!32;UBERON:0002791!1.52e-30!33;UBERON:0001893!1.26e-29!34;UBERON:0002780!4.32e-29!41;UBERON:0001890!4.32e-29!41;UBERON:0006240!4.32e-29!41;UBERON:0003080!2.27e-28!42;UBERON:0002771!3.27e-28!3;UBERON:0004733!4.13e-27!12;UBERON:0002028!4.13e-27!12;UBERON:0007277!4.13e-27!12;UBERON:0000033!4.49e-26!123;UBERON:0002680!1.48e-25!9;UBERON:0001895!1.48e-25!9;UBERON:0010092!1.48e-25!9;UBERON:0004732!5.33e-25!13;UBERON:0000200!8.32e-25!6;UBERON:0000153!9.58e-25!129;UBERON:0007811!9.58e-25!129;UBERON:0003076!1.28e-21!15;UBERON:0003057!1.28e-21!15;UBERON:0004121!3.03e-20!169;UBERON:0000924!1.02e-19!173;UBERON:0006601!1.02e-19!173;UBERON:0003056!4.22e-19!61;UBERON:0002360!4.53e-19!2;UBERON:0000094!4.53e-19!2;UBERON:0007645!4.53e-19!2;UBERON:0002037!7.96e-15!6;UBERON:0006215!7.96e-15!6;UBERON:0000988!7.40e-13!3;UBERON:0000025!3.02e-12!194;UBERON:0001871!5.87e-11!7;UBERON:0002298!1.27e-10!8;UBERON:0002581!1.30e-10!1;UBERON:0003112!1.73e-10!1;UBERON:0000032!1.73e-10!1;UBERON:0005253!1.73e-10!1;UBERON:0003128!1.73e-10!1;UBERON:0002241!1.73e-10!1;UBERON:0001703!1.73e-10!1;UBERON:0004761!1.73e-10!1;UBERON:0009617!1.73e-10!1;UBERON:0002022!2.50e-10!1;UBERON:0002902!3.61e-10!1;UBERON:0009899!3.61e-10!1;UBERON:0001882!4.33e-10!1;UBERON:0005403!4.33e-10!1;UBERON:0002363!4.75e-10!1;UBERON:0007647!4.75e-10!1;UBERON:0010115!4.75e-10!1;UBERON:0004111!2.75e-09!241;UBERON:0000064!3.46e-09!219;UBERON:0000483!1.16e-08!309;UBERON:0000119!1.50e-08!312;UBERON:0000477!1.91e-08!286;UBERON:0001872!2.19e-08!5;UBERON:0002021!3.40e-08!5;UBERON:0000349!4.53e-08!5;UBERON:0000475!8.48e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-66,6;UBERON:0006215,2.83e-66,6;UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,5.75012151642368,0.591095237907095,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413373593002368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.328863867814245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p23@SPOCK1 | |||
}} |
Revision as of 07:37, 22 January 2014
Short description: | p23@SPOCK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_SPOCK1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -31bp_to_ENST00000510405_5end |
EntrezGene: | SPOCK1 |
HGNC: | 11251 |
UniProt: | D6RFX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-66 | 6 |
rhombic lip | 2.83e-66 | 6 |
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |