FFCP PHASE1:Hg19::chr5:672925..672969,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1577 | |||
|description=CAGE_peak_at_chr5:672925..672969,- | |||
|id=chr5:672925..672969,- | |||
|ontology_enrichment_celltype=CL:0000838!1.89e-15!52;CL:0000542!5.85e-15!53;CL:0000051!5.85e-15!53;CL:0000738!1.65e-09!140;CL:0000624!2.76e-09!6;CL:0000791!6.96e-09!18;CL:0000789!6.96e-09!18;CL:0002420!6.96e-09!18;CL:0002419!6.96e-09!18;CL:0000790!6.96e-09!18;CL:0000037!3.52e-08!172;CL:0000566!3.52e-08!172;CL:0002031!1.78e-07!124;CL:0000084!3.30e-07!25;CL:0000827!3.30e-07!25;CL:0000236!5.86e-07!14;CL:0000988!6.10e-07!182;CL:0000945!6.18e-07!24;CL:0000826!6.18e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.28e-27;6!CL:0000791;9.95e-24;18!CL:0000789;9.95e-24;18!CL:0002419;9.95e-24;18!CL:0000084;1.60e-16;25!CL:0000623;1.60e-14;3!CL:0000898;2.01e-14;3!CL:0000815;5.37e-10;2!CL:0000792;5.37e-10;2!CL:0002677;5.37e-10;2!CL:0000097;3.24e-09;5!CL:0000542;5.39e-08;53!CL:0000625;9.80e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.05e-27,6;CL:0000791,8.73e-24,18;CL:0000789,8.73e-24,18;CL:0002420,8.73e-24,18;CL:0002419,8.73e-24,18;CL:0000790,8.73e-24,18;CL:0000084,1.46e-16,25;CL:0000827,1.46e-16,25;CL:0000623,1.60e-14,3;CL:0000825,1.60e-14,3;CL:0000898,1.68e-14,3;CL:0000838,3.52e-14,52;CL:0000542,7.47e-14,53;CL:0000051,7.47e-14,53;CL:0000738,6.14e-12,136;CL:0000037,9.28e-11,168;CL:0002032,2.50e-10,161;CL:0000837,2.50e-10,161;CL:0002031,2.74e-10,120;CL:0000815,4.81e-10,2;CL:0000792,4.81e-10,2;CL:0002677,4.81e-10,2;CL:0000988,6.29e-10,177;CL:0000097,3.42e-09,5;CL:0002028,3.42e-09,5;CL:0002087,2.46e-07,115;CL:0000625,9.66e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;9.95e-24;18!CL:0000051;5.39e-08;53 | |||
|ontology_enrichment_disease=DOID:162!8.55e-08!235;DOID:14566!2.86e-07!239;DOID:0050686!7.42e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.91914699048606,2.32224184974114,0,0,0,0.154934401160603,0.142169232487422,4.9912074686924,0.553995408531877,1.20326668482085,1.95309783644267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0,0,0,0.889509253863555,0.426730222566507,0,0,0.661044872784862,0.954053754535364,0.569212969109448,2.93618594685469,0.764546456250458,11.8954195721123,2.24203425192614,2.10707267820062,8.65522988500866,9.82526906872912,6.5792479679843,0,2.60737813306872,0.473447805734733,1.94826728407911,0.334231370655521,3.53527088969805,3.76607620792156,1.89562704635511,0,0.130059347559878,0,0,0,2.37258501059297,1.87278579662799,1.04535523804977,0,8.81407135284419,6.18529401868734,2.78321661221453,0,0,0,1.50575119077773,0.127986611154418,0,0.236777252044017,0,5.04016858061831,6.95344509037119,5.79297615531196,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3664057770386,8.35895729818376,8.2057581727147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94061520403854,7.33133754522359,3.46526197955321,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0.542530047399471,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0.144269212976445,0.0711418433484141,0,0,0.766021480529467,0,0.649243880549111,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0,1.16794399198336,0,0,0,0,0,0,0,0,0.121360521749513,0,0.568272293612826,0.71623345421307,0.296964680832639,1.53580351049616,0,0,0,0,0.422250816255987,0,0,0.503865495708552,0,0.123084805461069,0,0,0,2.04628948090749,0,0,0,0,0,0,0.7812832832557,0.174919999992391,0,0,2.03402920234213,0.945550727071745,0.689486746482929,1.16641845353302,0.347249989866585,0,0,0,0,0,0,0.762569244632931,0.139423744278603,0.0769502585037971,0,0,0,0.434589487688032,1.27600463892768,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.91227394607833,0.586993856796269,0.728341138602278,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.347119476670262,0.293977192243133,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0.426905989478705,0,0,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,2.57205037544031,0.412618309791701,1.24632101408756,0.2249738915515,0.77380195455795,0,2.34804281319486,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0.544017803369474,0,0,0,0.471162288750703,0,0,0,0,0,0.0620964029413835,0.276697269872462,0.249960815924213,0,0,0.235265819698172,0,0.434763085832475,0,0.467426619694449,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0.310525913752519,0,0.265841714557995,0,0.150257608997218,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.371807292777007,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.294443155503077,0.235939446695481,0,0.577628330751691,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0.351742488719241,0.127762427639595,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0.118193840883968,0.222462803784138,0,0,0,0,0,0,0,0,0.23248285073625,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0.795803100645473,0,0.11294608203896,0,0.905777061400041,0,0,1.88126918544609,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0.435433495793923,0,0,0.0717222053926763,0,0.162806537221949,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:672925..672969,- | |||
}} |
Revision as of 04:28, 22 January 2014
Short description: | p@chr5:672925..672969, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:672925..672969, - |
Coexpression cluster: | C1577_Mast_CD4_CD34_CD8_Natural_CD14_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.05e-27 | 6 |
mature alpha-beta T cell | 8.73e-24 | 18 |
alpha-beta T cell | 8.73e-24 | 18 |
immature T cell | 8.73e-24 | 18 |
mature T cell | 8.73e-24 | 18 |
immature alpha-beta T cell | 8.73e-24 | 18 |
T cell | 1.46e-16 | 25 |
pro-T cell | 1.46e-16 | 25 |
natural killer cell | 1.60e-14 | 3 |
pro-NK cell | 1.60e-14 | 3 |
naive T cell | 1.68e-14 | 3 |
lymphoid lineage restricted progenitor cell | 3.52e-14 | 52 |
lymphocyte | 7.47e-14 | 53 |
common lymphoid progenitor | 7.47e-14 | 53 |
leukocyte | 6.14e-12 | 136 |
hematopoietic stem cell | 9.28e-11 | 168 |
hematopoietic oligopotent progenitor cell | 2.50e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.50e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 2.74e-10 | 120 |
regulatory T cell | 4.81e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.81e-10 | 2 |
naive regulatory T cell | 4.81e-10 | 2 |
hematopoietic cell | 6.29e-10 | 177 |
mast cell | 3.42e-09 | 5 |
basophil mast progenitor cell | 3.42e-09 | 5 |
nongranular leukocyte | 2.46e-07 | 115 |
CD8-positive, alpha-beta T cell | 9.66e-07 | 11 |