FFCP PHASE1:Hg19::chr5:96267508..96267529,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_at_chr5:96267508..96267529,+ | |||
|id=chr5:96267508..96267529,+ | |||
|ontology_enrichment_celltype=CL:0002032!9.49e-27!165;CL:0000837!9.49e-27!165;CL:0002031!1.22e-26!124;CL:0000738!1.90e-26!140;CL:0000037!1.92e-26!172;CL:0000566!1.92e-26!172;CL:0000988!3.11e-24!182;CL:0000945!1.65e-18!24;CL:0000826!1.65e-18!24;CL:0000557!2.35e-18!71;CL:0002087!4.66e-18!119;CL:0000763!1.32e-17!112;CL:0000049!1.32e-17!112;CL:0000839!2.17e-15!70;CL:0000766!1.15e-13!76;CL:0000990!1.23e-13!8;CL:0000453!3.05e-13!5;CL:0002009!6.20e-13!65;CL:0002274!3.85e-12!5;CL:0000457!3.85e-12!5;CL:0002191!3.85e-12!5;CL:0000097!3.85e-12!5;CL:0000831!3.85e-12!5;CL:0002028!3.85e-12!5;CL:0000451!6.20e-11!10;CL:0002194!1.22e-10!63;CL:0000576!1.22e-10!63;CL:0000040!1.22e-10!63;CL:0000559!1.22e-10!63;CL:0000838!5.74e-09!52;CL:0000542!1.01e-08!53;CL:0000051!1.01e-08!53;CL:0000817!2.03e-08!3;CL:0000840!1.48e-07!5;CL:0001029!1.48e-07!5;CL:0002057!4.27e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.00e-35;24!CL:0001014;2.09e-27;2!CL:0001016;2.09e-27;2!CL:0000946;7.13e-15;1!CL:0000786;7.13e-15;1!CL:0000453;1.42e-11;5!CL:0000840;8.48e-10;5!CL:0000542;6.96e-07;53!CL:0000990;8.10e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.03e-34,24;CL:0000826,1.03e-34,24;CL:0001014,1.60e-27,2;CL:0001016,1.60e-27,2;CL:0002031,4.68e-17,120;CL:0000838,1.14e-15,52;CL:0000542,2.33e-15,53;CL:0000051,2.33e-15,53;CL:0000738,6.79e-15,136;CL:0000946,7.13e-15,1;CL:0000786,7.13e-15,1;CL:0000980,7.13e-15,1;CL:0002087,1.47e-12,115;CL:0002032,2.30e-12,161;CL:0000837,2.30e-12,161;CL:0000037,8.65e-12,168;CL:0000453,1.28e-11,5;CL:0000988,4.08e-11,177;CL:0000840,7.76e-10,5;CL:0001029,7.76e-10,5;CL:0000785,4.38e-08,2;CL:0000955,4.38e-08,2;CL:0000818,4.38e-08,2;CL:0000954,4.38e-08,2;CL:0000816,4.38e-08,2;CL:0000990,7.64e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.57e-14;1!CL:0000954;4.38e-08;2!CL:0000051;6.96e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.43e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:630;4.73e-15;1!DOID:0050177;4.73e-15;1!DOID:0050427;4.73e-15;1!DOID:0060058;1.15e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.73e-15,1;DOID:0050177,4.73e-15,1;DOID:0050427,4.73e-15,1;DOID:0060058,1.22e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.10e-17!102;UBERON:0003061!1.10e-17!102;UBERON:0002371!6.49e-17!80;UBERON:0002193!1.32e-16!112;UBERON:0002405!6.14e-16!115;UBERON:0001474!3.22e-15!86;UBERON:0004765!6.97e-12!101;UBERON:0001434!6.97e-12!101;UBERON:0004177!9.94e-09!7;UBERON:0002106!1.89e-08!3;UBERON:0004854!1.89e-08!3;UBERON:0009034!1.89e-08!3;UBERON:0002095!1.89e-08!3;UBERON:0004782!1.89e-08!3;UBERON:0003281!1.89e-08!3;UBERON:0009664!1.89e-08!3;UBERON:0002296!1.89e-08!3;UBERON:0005602!1.89e-08!3;UBERON:0001179!1.89e-08!3;UBERON:0006293!1.89e-08!3;UBERON:0000988!2.18e-07!3;UBERON:0002298!4.43e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.57e-14;1!UBERON:0001153;2.57e-14;1!UBERON:0009854;2.57e-14;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.11e-14,1;UBERON:0001153,2.11e-14,1;UBERON:0001045,2.11e-14,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04991050464142,4.43343183029707,3.30585281517453,0,0,0,0,0,0,0.154934401160603,1.13735385989937,0.293600439334847,0.553995408531877,0,0,0,0.32389366601898,0.257575567634187,0,0,0.242584061187816,0,0,0,0.28769239232215,1.2808035326455,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0.329851300186716,2.19410023383795,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.522389211897802,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.702012795417713,1.48631162288728,0,0,0,0,0,0,0.492663237895943,0.264145302039678,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,1.65770349318689,0,0,4.06179858021529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,4.49947783103001,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.213574825135389,0,0,0,0,13.7625636170412,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0.981392365535065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,5.99216735290052,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0.187967835959707,0.386747327841463,19.4885254053611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0.129177819672012,0.248298857183432,0,0,0,0,0,0.80822463617505,0.215166616178029,0,0,0,0,0,0,0,0,0,0,21.4780889843166 | |||
|short_description=p@chr5:96267508..96267529,+ | |||
}} |
Revision as of 06:37, 22 January 2014
Short description: | p@chr5:96267508..96267529, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:96267508..96267529, + |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.03e-34 | 24 |
pro-B cell | 1.03e-34 | 24 |
CD1a-positive Langerhans cell | 1.60e-27 | 2 |
immature CD1a-positive Langerhans cell | 1.60e-27 | 2 |
hematopoietic lineage restricted progenitor cell | 4.68e-17 | 120 |
lymphoid lineage restricted progenitor cell | 1.14e-15 | 52 |
lymphocyte | 2.33e-15 | 53 |
common lymphoid progenitor | 2.33e-15 | 53 |
leukocyte | 6.79e-15 | 136 |
antibody secreting cell | 7.13e-15 | 1 |
plasma cell | 7.13e-15 | 1 |
plasmablast | 7.13e-15 | 1 |
nongranular leukocyte | 1.47e-12 | 115 |
hematopoietic oligopotent progenitor cell | 2.30e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.30e-12 | 161 |
hematopoietic stem cell | 8.65e-12 | 168 |
Langerhans cell | 1.28e-11 | 5 |
hematopoietic cell | 4.08e-11 | 177 |
immature conventional dendritic cell | 7.76e-10 | 5 |
common dendritic progenitor | 7.76e-10 | 5 |
mature B cell | 4.38e-08 | 2 |
pre-B-II cell | 4.38e-08 | 2 |
transitional stage B cell | 4.38e-08 | 2 |
small pre-B-II cell | 4.38e-08 | 2 |
immature B cell | 4.38e-08 | 2 |
conventional dendritic cell | 7.64e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.11e-14 | 1 |
caecum | 2.11e-14 | 1 |
midgut | 2.11e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.73e-15 | 1 |
monogenic disease | 4.73e-15 | 1 |
xeroderma pigmentosum | 4.73e-15 | 1 |
lymphoma | 1.22e-12 | 10 |