FFCP PHASE1:Mm9::chr1:135069525..135069528,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=161|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:135069525..135069528,+|id=chr1:135069525..135069528,+|ontology_enrichment_celltype=CL:0000349!4.47e-25!3;CL:0000351!4.47e-25!3|ontology_enrichment_celltype_v019_2=CL:0000349,3.91e-24,3;CL:0000351,3.91e-24,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!2.56e-25!3;UBERON:0000478!2.56e-25!3;UBERON:0000158!2.56e-25!3;UBERON:0000358!4.47e-25!3;UBERON:0000307!4.47e-25!3;UBERON:0001987!1.29e-17!2;UBERON:0003124!1.29e-17!2;UBERON:0004340!1.29e-17!2;UBERON:0000305!2.09e-09!1;UBERON:0005795!2.78e-09!4;UBERON:0000995!2.78e-09!4;UBERON:0000945!3.87e-08!16;UBERON:0010039!3.87e-08!16;UBERON:0003975!1.34e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.65e-52,3;UBERON:0000478,1.65e-52,3;UBERON:0000158,1.65e-52,3;UBERON:0001987,6.35e-36,2;UBERON:0003124,6.35e-36,2;UBERON:0004340,6.35e-36,2;UBERON:0000358,3.91e-24,3;UBERON:0000307,3.91e-24,3;UBERON:0007010,3.91e-24,3;UBERON:0005795,1.43e-18,4;UBERON:0000995,1.43e-18,4;UBERON:0000305,2.59e-18,1;UBERON:0003975,4.39e-15,5;UBERON:0003134,8.03e-10,8;UBERON:0004175,7.68e-09,9;UBERON:0000474,7.68e-09,9;UBERON:0003100,2.08e-07,11;UBERON:0004923,2.53e-07,24;UBERON:0004871,5.46e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48316980640624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6616912725234,6.35496212591461,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99362074109975,0.448569283047378,11.5840385291214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:135069525..135069528,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=161 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:135069525..135069528,+ | |||
|description=CAGE_peak_at_chr1:135069525..135069528,+ | |||
|id=chr1:135069525..135069528,+ | |||
|ontology_enrichment_celltype=CL:0000349!4.47e-25!3;CL:0000351!4.47e-25!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.91e-24,3;CL:0000351,3.91e-24,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.56e-25!3;UBERON:0000478!2.56e-25!3;UBERON:0000158!2.56e-25!3;UBERON:0000358!4.47e-25!3;UBERON:0000307!4.47e-25!3;UBERON:0001987!1.29e-17!2;UBERON:0003124!1.29e-17!2;UBERON:0004340!1.29e-17!2;UBERON:0000305!2.09e-09!1;UBERON:0005795!2.78e-09!4;UBERON:0000995!2.78e-09!4;UBERON:0000945!3.87e-08!16;UBERON:0010039!3.87e-08!16;UBERON:0003975!1.34e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.65e-52,3;UBERON:0000478,1.65e-52,3;UBERON:0000158,1.65e-52,3;UBERON:0001987,6.35e-36,2;UBERON:0003124,6.35e-36,2;UBERON:0004340,6.35e-36,2;UBERON:0000358,3.91e-24,3;UBERON:0000307,3.91e-24,3;UBERON:0007010,3.91e-24,3;UBERON:0005795,1.43e-18,4;UBERON:0000995,1.43e-18,4;UBERON:0000305,2.59e-18,1;UBERON:0003975,4.39e-15,5;UBERON:0003134,8.03e-10,8;UBERON:0004175,7.68e-09,9;UBERON:0000474,7.68e-09,9;UBERON:0003100,2.08e-07,11;UBERON:0004923,2.53e-07,24;UBERON:0004871,5.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48316980640624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6616912725234,6.35496212591461,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99362074109975,0.448569283047378,11.5840385291214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:135069525..135069528,+ | |||
}} |
Latest revision as of 19:19, 4 August 2015
Short description: | p@chr1:135069525..135069528, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135069525..135069528, + |
Coexpression cluster: | MCL_coexpression_mm9:161 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.91e-24 | 3 |
trophoblast cell | 3.91e-24 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.65e-52 | 3 |
extraembryonic structure | 1.65e-52 | 3 |
membranous layer | 1.65e-52 | 3 |
placenta | 6.35e-36 | 2 |
chorion | 6.35e-36 | 2 |
allantois | 6.35e-36 | 2 |
blastocyst | 3.91e-24 | 3 |
blastula | 3.91e-24 | 3 |
cleaving embryo | 3.91e-24 | 3 |
embryonic uterus | 1.43e-18 | 4 |
uterus | 1.43e-18 | 4 |
amnion | 2.59e-18 | 1 |
internal female genitalia | 4.39e-15 | 5 |
female reproductive organ | 8.03e-10 | 8 |
internal genitalia | 7.68e-09 | 9 |
female reproductive system | 7.68e-09 | 9 |
female organism | 2.08e-07 | 11 |
organ component layer | 2.53e-07 | 24 |
somatic layer of lateral plate mesoderm | 5.46e-07 | 3 |