FFCP PHASE1:Hg19::chr6:30294343..30294351,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56658 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10065 | |||
|TSSclassifier=strong | |||
|UniProt=A2AAZ5 | |||
|association_with_transcript=87bp_to_ENST00000458516,uc003npz.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_9_at_TRIM39_5end | |||
|id=chr6:30294343..30294351,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.98e-12!42;CL:0000738!4.83e-11!140;CL:0000860!5.94e-11!45;CL:0000766!2.34e-10!76;CL:0002009!4.45e-08!65;CL:0000063!6.09e-08!578;CL:0000557!7.42e-08!71;CL:0002087!8.45e-08!119;CL:0002031!1.48e-07!124;CL:0000037!2.70e-07!172;CL:0000566!2.70e-07!172;CL:0002194!5.11e-07!63;CL:0000576!5.11e-07!63;CL:0000040!5.11e-07!63;CL:0000559!5.11e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000094;4.80e-16;8!CL:0000775;4.88e-16;3!CL:0000623;9.81e-15;3!CL:0000081;1.38e-11;11!CL:0000771;1.48e-11;2!CL:0001014;2.78e-11;2!CL:0001016;2.78e-11;2!CL:0000738;9.23e-10;136!CL:0000860;2.31e-09;33!CL:0002057;2.31e-09;33!CL:0002087;4.26e-09;104!CL:0000840;4.98e-08;5!CL:0000624;1.32e-07;6!CL:0000226;3.31e-07;3!CL:0000842;3.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.38e-27,136;CL:0000037,4.47e-21,168;CL:0000988,1.15e-19,177;CL:0002032,5.37e-19,161;CL:0000837,5.37e-19,161;CL:0002087,2.34e-18,115;CL:0002031,1.63e-17,120;CL:0000775,3.64e-16,3;CL:0000094,4.02e-16,8;CL:0000623,5.98e-15,3;CL:0000825,5.98e-15,3;CL:0000766,8.31e-14,72;CL:0000081,1.22e-11,11;CL:0000771,1.48e-11,2;CL:0000134,2.60e-11,354;CL:0001014,2.72e-11,2;CL:0001016,2.72e-11,2;CL:0002320,6.05e-11,361;CL:0000763,1.10e-10,108;CL:0000049,1.10e-10,108;CL:0002009,1.24e-10,61;CL:0000860,8.74e-10,42;CL:0002057,8.74e-10,42;CL:0000219,1.19e-09,386;CL:0000557,1.86e-09,67;CL:0000838,6.68e-09,52;CL:0000542,1.08e-08,53;CL:0000051,1.08e-08,53;CL:0000473,2.48e-08,48;CL:0000234,2.48e-08,48;CL:0000034,2.68e-08,441;CL:0000840,4.13e-08,5;CL:0001029,4.13e-08,5;CL:0000048,4.52e-08,427;CL:0000723,7.47e-08,433;CL:0002194,1.08e-07,59;CL:0000576,1.08e-07,59;CL:0000040,1.08e-07,59;CL:0000559,1.08e-07,59;CL:0000624,2.03e-07,6;CL:0000226,2.83e-07,3;CL:0000842,2.83e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.16e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.92e-10,371;UBERON:0002390,5.05e-09,98;UBERON:0003061,5.05e-09,98;UBERON:0001474,1.66e-08,82;UBERON:0002371,4.84e-08,76;UBERON:0002193,6.92e-08,108;UBERON:0004765,1.65e-07,90;UBERON:0002405,3.42e-07,93 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0.553995408531877,0.802177789880567,1.95309783644267,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0.822335776043652,0.929119112685311,0.28769239232215,0,0.945928919554341,0.689491361473237,2.5819387343353,0,0.188242339542605,0,0.449446968890169,2.44867113896722,1.92557416245656,3.19668562899521,0,0.598390972864896,0,1.45104619314292,1.13477044938228,3.11411124497787,0.502497330513487,0,0,0.605399502633369,1.47311054395026,1.26584954976354,0.211255286311942,0,0,0,0,0.16072558669708,0,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,2.27685187643779,1.76171156811282,2.6759125968766,0,1.12101712596307,0,0.786839080455332,1.17903228824749,1.02800749499755,0,0.32592226663359,0,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0.164437904603676,0,0,0.296573126324121,0.535081656179426,0,0,1.14966148080576,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0.80642697289893,1.87208137048455,1.01377082717959,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,1.66943437013739,0.571994910780128,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,26.3560834872127,46.533631697799,0,0.496971951695318,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.538168907066586,0,0,0.300091096084402,0,0,0,0,0,0,0,0,1.06502877754984,0,0,0.386521706326594,0,0,0,0,0,0,0,0.36497735907583,1.56449532329816,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,1.97030760201927,1.72502059887614,1.02674429023799,0,0,0,0,0,2.99602809578873,2.99161459204025,9.11714129559278,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,1.2942852049117,1.49418580924822,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0.321707842287215,1.48418066444991,0.154209693802656,0.710246901252508,0,0,0.116210378459959,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.382838137483752,0.4046311234222,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0.278847488557207,0.230850775511391,0.113942055847001,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0.335643173951685,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,1.20258735531594,0.103688191397247,0,0,0,0,0.569219092059585,0.138674673013139,0,0.685946781900644,0.34823682632161,0.17472666824203,0,0,0.0730893170861856,0,0.0969890164884194,0.353024506766001,0,0.137041924646751,0.19871461170299,0,0.391102765469606,0.240476460754601,0,0,0.288180834308212,0,0.514784993585894,0.14405479798815,0.49701014226173,0,0,0.104602846312333,0.305994652908965,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,2.32991899054908,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,2.4747128070665,3.86900977278975,0,0.335434687599266,0.0788057072991982,0,0.528001682597033,0,0.383830394638891,0,0,1.017074150619,0,0.864221491201268,0,0,0.082092520749339,0,0.226624183040251,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0.303298235083296,0,0,0,0,0,0,0,0.378806010550178,0,0,0.457680136793847,0.151230923763239,0,0.295710299979268,0.318593534327405,0.899606224327209,0.155262956876259,0.414706207840855,0.265841714557995,0,0.150257608997218,0.380805212168795,0.406870733204662,0.363697318405119,0.107410557042488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| |||
|short_description=p9@TRIM39 | |||
}} |
Revision as of 10:48, 22 January 2014
Short description: | p9@TRIM39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TRIM39_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 87bp_to_ENST00000458516, uc003npz.2_5end |
EntrezGene: | TRIM39 |
HGNC: | 10065 |
UniProt: | A2AAZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.92e-10 | 371 |
hematopoietic system | 5.05e-09 | 98 |
blood island | 5.05e-09 | 98 |
bone element | 1.66e-08 | 82 |
bone marrow | 4.84e-08 | 76 |
hemolymphoid system | 6.92e-08 | 108 |
skeletal element | 1.65e-07 | 90 |
immune system | 3.42e-07 | 93 |