FFCP PHASE1:Hg19::chr7:35840659..35840671,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=989 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1717 | |||
|TSSclassifier=strong | |||
|UniProt=E7EPK1,Q16181,F5GZE5 | |||
|association_with_transcript=32bp_to_ENST00000350320,ENST00000399034,ENST00000469679,uc010kxc.2,uc011kat.1,uc011kau.1_5end | |||
|coexpression_cluster_id=C4685 | |||
|description=CAGE_peak_3_at_SEPT7_5end | |||
|id=chr7:35840659..35840671,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.18e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.86e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003080!2.53e-13!42;UBERON:0007023!2.61e-13!115;UBERON:0002780!3.04e-13!41;UBERON:0001890!3.04e-13!41;UBERON:0006240!3.04e-13!41;UBERON:0001049!3.24e-13!57;UBERON:0005068!3.24e-13!57;UBERON:0006241!3.24e-13!57;UBERON:0007135!3.24e-13!57;UBERON:0001893!3.56e-13!34;UBERON:0002020!3.59e-13!34;UBERON:0003528!3.59e-13!34;UBERON:0002616!1.03e-12!59;UBERON:0002791!1.46e-12!33;UBERON:0001869!2.34e-12!32;UBERON:0000955!1.41e-11!69;UBERON:0006238!1.41e-11!69;UBERON:0001017!5.41e-11!82;UBERON:0005743!1.20e-09!86;UBERON:0002619!5.74e-09!22;UBERON:0000956!2.10e-08!25;UBERON:0000203!2.10e-08!25;UBERON:0003075!2.98e-08!86;UBERON:0007284!2.98e-08!86;UBERON:0001950!6.72e-08!20;UBERON:0000073!1.16e-07!94;UBERON:0001016!1.16e-07!94;UBERON:0002346!1.74e-07!90;UBERON:0000033!2.49e-07!123;UBERON:0000153!5.53e-07!129;UBERON:0007811!5.53e-07!129;UBERON:0002420!6.03e-07!9;UBERON:0007245!6.03e-07!9;UBERON:0010009!6.03e-07!9;UBERON:0010011!6.03e-07!9;UBERON:0000454!6.03e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.55e-12;34!UBERON:0003528;8.04e-12;34!UBERON:0002020;8.04e-12;34!UBERON:0001869;1.14e-11;32!UBERON:0002791;1.47e-11;32!UBERON:0002780;4.21e-10;41!UBERON:0001890;4.21e-10;41!UBERON:0002619;2.43e-09;22!UBERON:0000956;8.15e-09;25!UBERON:0000203;8.15e-09;25!UBERON:0001950;3.13e-08;20!UBERON:0000073;1.25e-07;53!UBERON:0002616;1.25e-07;53!UBERON:0002420;3.89e-07;9!UBERON:0007245;3.89e-07;9!UBERON:0010009;3.89e-07;9!UBERON:0010011;3.89e-07;9!UBERON:0000454;3.89e-07;9!UBERON:0000125;8.32e-07;9!UBERON:0002308;8.32e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.14e-13,41;UBERON:0001890,3.14e-13,41;UBERON:0003080,3.14e-13,41;UBERON:0006240,3.14e-13,41;UBERON:0001893,3.91e-13,34;UBERON:0003528,3.95e-13,34;UBERON:0002020,3.95e-13,34;UBERON:0007023,7.19e-13,114;UBERON:0001049,7.47e-13,56;UBERON:0005068,7.47e-13,56;UBERON:0006241,7.47e-13,56;UBERON:0007135,7.47e-13,56;UBERON:0001869,2.60e-12,32;UBERON:0000073,2.79e-12,53;UBERON:0002616,2.79e-12,53;UBERON:0002791,3.75e-12,32;UBERON:0000955,1.96e-11,68;UBERON:0006238,1.96e-11,68;UBERON:0001017,8.24e-11,81;UBERON:0010314,2.20e-09,132;UBERON:0002619,6.78e-09,22;UBERON:0001016,1.37e-08,89;UBERON:0000956,2.44e-08,25;UBERON:0000203,2.44e-08,25;UBERON:0001950,8.02e-08,20;UBERON:0003075,9.21e-08,82;UBERON:0007284,9.21e-08,82;UBERON:0002346,5.23e-07,86;UBERON:0002420,5.45e-07,9;UBERON:0007245,5.45e-07,9;UBERON:0010009,5.45e-07,9;UBERON:0010011,5.45e-07,9;UBERON:0000454,5.45e-07,9;UBERON:0003056,8.57e-07,61 | |||
|phase1_expression=4.54195948176392,4.06790995392868,8.3163098416623,7.00513088471913,3.5756887554183,9.59572376510406,2.53299878168311,2.52687949370732,2.35067065379855,0.982935746006035,0.697801167972428,1.09220686065086,0.791300934685361,2.35156070624089,2.98257638155124,3.36162573225888,4.21886169616784,2.92124036154949,3.90346239032406,0.984968464614303,1.42800483870977,0.626909442956176,3.43483184557268,2.6006140763848,2.25976751270645,3.05653622991805,3.44822475689772,4.72264687882075,0,11.8987113410136,3.2511385896376,6.43594857135249,2.71085326900425,0.369754010166788,1.00707360754392,1.84820002233648,2.64240395401362,4.43196326825502,3.20871115952227,2.38711957787437,0.895661896959697,1.29557466407592,1.03030227053675,1.74477886535478,0.755751887377619,0.485168122375632,2.32429036905685,1.6446715520873,1.54853185447552,1.1507695692886,1.2808035326455,0.47296445977717,2.06847408441971,0.645484683583826,2.70852973188684,0.941211697713023,1.63743690034707,1.57306439111559,1.83650335422542,2.56743221660875,1.91801137739712,0.659702600373432,1.19678194572979,0.852449501065388,0.580418477257168,1.13477044938228,1.24564449799115,1.50749199154046,0.521482918420201,0.868755378820466,0.605399502633369,1.47311054395026,0.632924774881769,0.633765858935825,0.850417199860174,0,0.786300418025466,0.450530678524519,1.28580469357664,0.570025487482497,0.39783335439818,1.27864907635244,3.51992488922645,3.27683166757279,2.66852776159066,2.98711155796555,4.00395987036012,1.72425731986345,2.64417949113945,0.954053754535364,3.41527781465669,2.93618594685469,2.29363936875137,2.64342657158052,4.48406850385229,1.84368859342554,7.47497126432566,3.53709686474248,4.31763147898969,3.17654341242288,3.2592226663359,1.4203434172042,1.94826728407911,3.00808233589969,2.06224135232386,2.43687284041983,3.24964636518019,3.20228299314188,2.21100890851793,2.30213066445147,2.21080014228679,1.44901542867526,4.15202376853769,3.21048993707656,1.04535523804977,2.37949619664889,3.06576394881537,5.49803912772208,6.32549230048757,4.14135038621326,5.20866763085135,6.65316431113862,6.77588035849977,10.2389288923535,3.74792179657038,6.39298580518846,7.39015197228942,11.4915843638097,5.88368430723716,8.97911304073354,9.75227465255847,6.03630773733273,13.5534315554142,4.69870898099936,1.00267582127178,2.31754430337318,3.9764297352555,1.94653948121054,2.07976597760949,1.99556457716308,2.98638271356629,3.6019245761871,0.364295288292542,2.22470665670658,1.9472843619281,4.00498395788315,1.72845348674525,1.66943437013739,2.85997455390064,5.94332002127304,2.38514888840046,0,1.73570250803797,3.39184765154406,2.93649605346934,3.85165258716094,2.71693456497854,3.10100111003195,3.91342888955381,4.35136796594071,3.62546385398232,1.52054421143703,2.68468263302986,6.98559852657151,2.43042584364528,6.96537880615822,7.63399866928977,10.0224217630157,1.53316637465883,2.84779697870439,2.93122790288652,10.5424333948851,23.2668158488995,1.74437620857014,8.44852317882041,4.55869841992487,6.88527740228738,3.44203944898576,3.90135220418193,5.04609840128076,1.06748995729705,2.96001058100592,18.9838731593857,2.96363478553314,5.23078089963068,2.27036141467397,1.15235184896,0.70296429550139,5.30672130611545,3.99330275081114,2.24173020827702,4.57994544710683,3.72307772046703,4.77532742787645,4.49139176760765,3.80786383666481,3.30642499762449,4.75201142912821,2.47266929278557,0.910161361938026,0,4.88174730466792,4.75450375513464,6.09541054065202,3.07284334616587,2.45190236639216,2.25357088359895,5.33131260852099,3.7671823494661,4.27114777637135,7.2056846394251,2.70081986475962,4.84346887420663,4.3798891807757,4.65292140828975,6.75105328965065,6.04109431999431,3.28163906517349,3.58994604704967,5.01102776138317,5.32514388774922,5.74286959897549,3.89989362314122,4.63826047591912,6.2731607735892,8.89094245705912,1.58565817968474,1.32529768321485,2.09149097165133,1.7622379352613,1.00928340350251,1.09493207722749,1.56449532329816,0.643240938192885,1.38134921352481,3.25057549622385,6.49691533502627,2.9576700009961,3.54027849164014,5.78426471720357,5.5146986366197,2.61455332910887,5.93176547777742,4.58426447744559,3.92442930250692,1.92373578473195,1.4763109092493,0,2.4694440679884,5.88034845542168,0,0.982827216677626,1.77236972004421,2.6487785964879,1.59884970106048,4.11762744716461,5.1582634142054,1.1240175325762,2.81481122752566,3.88871469665824,0.325808305310325,2.07986957055916,0,1.73895607462615,5.51820862908362,2.45422961193825,0,5.13686211033415,0,0,2.70838706696137,4.91408956792399,2.52672975890838,4.68669169933885,5.71139235876122,7.93940544557364,2.4180801129769,2.03443756959773,1.15014803749563,4.92663237895944,1.49682337822484,1.86595303986695,1.29707958075265,1.38866676769018,1.14296209725904,0.763976851116555,0,0,1.85089486865982,1.50171528921959,2.85826432630578,3.47606361470618,0.87192013766656,4.6936502925408,4.26596662000667,0,0.845302752556,4.25500986535793,6.24044621468197,1.02882949704857,1.41849132023278,1.0656887160644,5.14720777169331,1.08524321078289,0,2.60588947434988,5.33087923113819,3.16780749173372,5.72734816413214,11.3299349618038,5.79843348855931,2.43247561282381,0.502257091432126,2.10833939483032,7.90762023122223,1.14861935834114,4.27910715122155,4.77778312003011,2.87666851570537,6.98337756635593,1.34502172792233,11.8218456121156,10.1344960183973,11.2941871926179,2.54094624222463,1.30139853857622,0.773288812777695,1.84267891867784,1.91381625495949,2.99602809578873,8.97484377612075,9.53155680902882,1.96306386750624,0.500170521059677,1.35632511849868,5.19927153827018,4.81758269752337,8.98903765693428,5.97421216462837,2.10662269809403,0,2.0694614258501,5.31380478828349,1.65932251687533,3.64911180765948,0.391602314925481,0.343143423810856,4.75566460082641,3.01999881146064,5.44310544797566,0.909382714338778,0,0.604780586659361,5.21026396419431,6.29194090481056,6.73584226639377,9.86671449268897,10.2341449813341,8.20354997832398,8.90508398669946,2.46735510084249,3.55123450626254,3.53146770859379,2.59627214591811,4.18357362455853,1.81289174387433,4.81215528727884,1.10497186723076,4.01850568576124,3.09554985611419,3.54035920390445,1.35359883872224,3.08061348417659,0,4.38417673959782,3.4832037534649,1.13733384070897,1.53084334748864,7.55705706357488,0,0,0,1.78413391131527,0,0.895499018888713,8.11261543589958,4.18296721639841,2.56450125116389,0,0.650756789328606,1.54561517471583,2.01452822600355,2.88783249722058,2.87132768998086,1.30012049207304,4.82051789532479,1.25671933779759,2.61882649094895,2.30255512089194,4.13509717453592,3.00776685631166,2.17525040871343,4.26133137080504,4.00644160410318,1.98341898433174,1.92190067365106,2.4246415373971,1.31505115112215,3.253918845081,2.83331112147576,3.485186350803,0.616067160352178,2.66153015158511,5.21959795245044,2.59453906745488,2.14687330112987,3.34942532423701,6.01120906965579,7.43457756302917,0.511795582622668,2.1396949401696,0.95460974377781,0.78494864019923,10.0728576246656,4.39259247577688,2.82749765629647,1.2130948894399,0,2.10629228119491,0.975267478179181,1.94970791705028,2.11300293513511,4.91399681068749,7.21167702963935,1.13008116620243,1.10273068709225,4.64407282668854,2.63070531152258,1.73632660280006,3.27947376023316,2.63783490051515,1.54911749049875,1.12678241012897,3.44187245289724,3.63521451748548,2.1400263088875,3.90237170477658,3.58882980006029,2.63435914367922,0.75894634753143,1.74967360122491,2.4055528181378,0,0,2.2594512186427,0.86101074534246,0,0.443430153536676,4.13502120372527,5.07447609232169,4.58782324285425,3.98753031021914,3.81170840732462,3.29089818468955,2.59389324477087,5.40031437238115,6.34500141035416,2.67060177818683,3.84991942105343,1.47024129588619,2.41544127663434,1.00988449083511,2.63224820389132,4.14508309094938,2.59453182862662,1.1490322207942,1.69338866179106,1.62310970137278,1.12318871245384,0.456469358066384,1.09675927041116,0,2.03150133361924,0.963528450622197,0.80719882876419,0,0.343505344755765,0.921722292925374,0.671028323677248,1.00109485027145,3.71237381263877,1.9488432172667,2.46174797895425,0.811367035427949,0.66614393599564,7.04935025439248,0,3.07667176470977,8.1311549572174,1.67165076416218,1.70481688083848,2.86493381685228,10.9876931908076,4.60741053148848,29.8244294329889,11.253553312841,0.556543525114529,1.81284261649436,1.05562704063997,3.78571177677032,3.31540698637377,0.251932747854276,1.32949287252801,2.95403533106567,5.28767299025073,2.3365771298305,0,0.511572370226872,4.34030984802508,4.7896618469388,3.33410970433911,7.75466196876175,15.3995042948673,0,2.3438498497671,1.22443999994674,3.62499787717397,1.365521379426,0.762760950878299,2.6002644994473,1.37897349296586,1.16641845353302,1.38899995946634,21.2577932595321,10.2506972831597,3.05163472634166,4.31259113731776,0.886642856860642,16.234519389394,0.544692317594951,0.41827123283581,2.30850775511391,0.797594390929008,4.6112780877612,3.68006342080066,2.7161842980502,1.5950057986596,3.57230614267263,2.13213910407454,3.06579894587209,1.41282230755522,0.664846727600626,1.35357396370308,0.784250137270958,1.34257269580674,1.51802986179348,2.54298526368606,3.58696709697646,1.30586246527318,3.39247371441458,0,0.995261931078505,1.23840590304675,0.611030144933625,0.593042257361244,0.988511511572023,0.835375596043643,5.59429403739619,0.802577647298789,11.0104289490909,0.91227394607833,2.34797542718508,1.94224303627274,1.18375320854817,1.20990716048664,0.91821828489147,3.1593289814244,0.60129367765797,1.34794648816421,1.99396161812156,0,0.313932918407225,0,1.42304773014896,0.970722711091971,2.60339607502696,1.27390116638691,2.61177619741208,2.27144668714639,1.0319161948297,2.03188295707079,0.730893170861856,2.54557916864949,2.42472541221049,0.970817393606503,3.16373037092745,5.20759313657653,3.37814839895082,22.981818931984,1.17330829640882,0.801588202515337,2.34798294213288,0.599428828746391,1.00863292007874,1.03082936549324,1.54435498075768,1.4405479798815,0.745515213392595,1.17847017308398,2.8539883275459,2.92887969674533,5.20190909945241,2.88950589901519,13.2092463516154,8.21432273351958,2.55493176133945,3.86788897277961,0.525774708558629,3.6306712165393,4.35404805622199,2.15361907373044,0.798716001995964,1.28767814440971,6.24880080837243,4.36692571163721,7.56629755439048,3.49487848582361,2.83619456306005,1.7307330260045,3.50498428041761,0.78741985211799,1.94748663751304,10.3379859675209,10.0790520522566,2.57205037544031,2.33817042215297,3.32352270423348,2.249738915515,0,12.332160001579,1.34173875039706,1.65491985328316,0.891727998294968,1.16160370171347,0.179287339332845,1.53532157855556,2.85878130549347,3.97255182219259,5.33963929074975,2.17199840701485,3.45688596480507,2.61269888087527,1.19730191562487,0.492555124496034,1.70388021785422,6.00554085056666,1.61207457045891,0,7.88626033805458,8.33065390978947,0.513260513652988,0,3.31040978959853,3.14408610199332,2.07119527673598,2.97699613087171,0.988058159489721,2.19226677085613,0,3.80812462358632,2.7575888342497,1.22538230705385,0.983617892129413,0.471162288750703,29.2402499389105,23.5510691260789,17.6519212296165,3.44045517414043,5.54645257684261,3.91207338530716,0.138348634936231,8.99858937327168,1.81978941049977,2.28372266835974,0.470531639396343,0.468334905806882,0.28984205722165,2.23882204330311,2.57084640831947,2.77402930751307,4.35626912132705,5.78606174030923,3.55924488638614,2.28840068396924,3.62954217031774,1.86524640699337,4.43565449968902,6.05327715222069,0.899606224327209,3.10525913752519,2.90294345488599,3.45594228925393,4.69570555630561,3.75644022493046,10.2817407285575,10.5786390633212,3.81882184325375,3.22231671127465,3.71227007902795,8.75810955136955,5.200360940621,4.8075398725591,4.04099386519103,5.04739592914604,1.34833881285112,6.00436455849792,0.782982875895635,2.94717703165954,6.01958433241968,2.93684045407761,3.76086566271124,3.08801447160972,6.1399533882038,1.41351316756705,9.066959798733,1.52048196587765,0.256241518587947,5.18145512596798,0.607719912354764,13.9641020513248,0.974301544196942,1.0629187225069,1.14495775979091,1.96565909307848,2.70350199629091,0.845248493434508,2.19986135440423,1.38699248602383,0,3.97261167496785,2.57748330352577,0.979156554036111,0.622077260032973,0.255788742607303,1.1860729253635,0.314531883711793,0.327628914576042,2.37625541935635,1.70059936081346,1.73510069962603,3.35186950783946,6.36008701306837,0.867479195013787,2.40171224485641,4.58478726797889,8.26862788853641,14.9654094474751,24.0884179753494,11.1743701340006,18.2553564174272,1.00828678488687,8.85212831541989,18.408223602031,4.28308260777463,0.392590874004102,0.589848616738702,2.20114318226015,1.96393632455575,2.288292572803,3.4517996303005,3.38157577597667,2.40673050717623,6.85797233591968,0,2.88097363929565,1.47394725759087,1.03499260351932,19.9911250470448,24.2134210570293,15.0881361445864,15.7271209280889,0.546974809018219,2.74128883428591,3.47347824872506,1.05522746615772,0.894336993477167,0.535701835878287,1.68141861109412,3.03482802118316,4.09791944432336,2.83847584520444,1.03710588800201,3.08678416987353,9.31185341782594,11.1813715056843,0.709163045303809,5.45033869271139,2.66876515691748,20.7392578689123,1.68163297988273,2.73947616152849,10.3645243784938,0.9555033757741,2.07281978112303,0.47404083519818,2.32482850736251,8.34519707052381,4.00855682365126,0.414432328326074,1.19502933965765,4.14755797088455,0.430227358820278,0.946656005844523,0.681707238073262,2.11693525095465,1.3746412112643,1.86123831398592,3.82215575590973,1.00669888618013,0.588901401691458,1.70685094975177,3.23714418593947,1.84793052341245,1.1598144313382,1.45713297917742,1.87151570769685,0.994753875806841,2.37840181555137,0.5647304101948,1.64910775118144,1.05673990496671,1.23478652972711,1.96703604453562,0.470317296361523,2.94177986104687,0.471353094203252,6.47817941479319,5.34683520588755,2.5359343655004,4.24817786719542,3.19545321131502,1.80482086326016,0.699588091474503,1.07132363163395,1.05868461514708,0.882655033580851,4.3820183294791,0.917458566809082,7.16697915757257,1.10440093535229,10.4026979992099,0,3.1741610430924,4.46394021800102,3.69740502905135,3.02838593486652,1.26166424835079,4.8076851664026,0.886889507080059,1.42784361638774,0.534434810531121,1.8378979906969,3.25919801080088,4.16782840200317,4.01946195234268,8.29169439458779,9.51583561929436,1.91910583710883,0.952257725854961,3.68156786065235,3.22788514338461,2.35476911419288,1.2729431655633,1.61693751166575,1.95945073107265,0.684466602170562,1.81850543139386,2.79716601031438,1.66330178273007,1.30245229777559,0.640364075266293,11.5843369372164,0.898252021065869,4.69281884806909,1.58913877437726,2.84827324821017,0,2.21401172950129,1.9234109538194 | |||
|short_description=p3@SEPT7 | |||
}} |
Revision as of 16:30, 22 January 2014
Short description: | p3@SEPT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SEPT7_5end |
Coexpression cluster: | C4685_medial_frontal_amygdala_parietal_paracentral_occipital_Fibroblast |
Association with transcript: | 32bp_to_ENST00000350320, ENST00000399034, ENST00000469679, uc010kxc.2, uc011kat.1, uc011kau.1_5end |
EntrezGene: | SEPT7 |
HGNC: | 1717 |
UniProt: | E7EPK1Q16181F5GZE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.86e-08 | 76 |