FFCP PHASE1:Hg19::chr7:76911731..76911742,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57639 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29296 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-85bp_to_ENST00000474733_5end | |||
|coexpression_cluster_id=C2902 | |||
|description=CAGE_peak_8_at_CCDC146_5end | |||
|id=chr7:76911731..76911742,+ | |||
|ontology_enrichment_celltype=CL:0002617!2.71e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002581;5.92e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,3.58e-26,1 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.07e-13;2!UBERON:0010056;1.07e-13;2!UBERON:0006965;1.07e-13;2!UBERON:0005062;1.69e-07;4!UBERON:0007284;1.69e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;6.43e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,6.43e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.16e-16!115;UBERON:0000341!6.26e-09!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;5.92e-26;1!UBERON:0005623;5.92e-26;1!UBERON:0000341;1.07e-13;2!UBERON:0005406;1.07e-13;2!UBERON:0001723;1.41e-09;3!UBERON:0003978;1.41e-09;3!UBERON:0000946;1.41e-09;3!UBERON:0001033;1.41e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,2.78e-26,1;UBERON:0005623,2.78e-26,1;UBERON:0005406,8.28e-14,2;UBERON:0000341,1.37e-13,2;UBERON:0003978,1.10e-09,3;UBERON:0009751,1.10e-09,3;UBERON:0000946,1.10e-09,3;UBERON:0002523,1.10e-09,3;UBERON:0005983,1.10e-09,3;UBERON:0002165,1.10e-09,3;UBERON:0002062,1.10e-09,3;UBERON:0007280,1.10e-09,3;UBERON:0001723,1.54e-09,3;UBERON:0001033,1.54e-09,3;UBERON:0010056,1.54e-09,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59112177950125,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,1.60412296808179,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0.430227358820278,0,0,0,1.3746412112643,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0.714193294391221,0.0645889098360061,0,0,0.318235791390825,1.41482032270754,1.30630048738177,0.342233301085281,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |||
|short_description=p8@CCDC146 | |||
}} |
Revision as of 17:30, 22 January 2014
Short description: | p8@CCDC146 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CCDC146_5end |
Coexpression cluster: | C2902_clear_Preadipocyte_epididymis_aorta_heart_skin_thyroid |
Association with transcript: | -85bp_to_ENST00000474733_5end |
EntrezGene: | CCDC146 |
HGNC: | 29296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 3.58e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 2.78e-26 | 1 |
semi-lunar valve | 2.78e-26 | 1 |
perirenal fat | 8.28e-14 | 2 |
throat | 1.37e-13 | 2 |
valve | 1.10e-09 | 3 |
cardiac mesenchyme | 1.10e-09 | 3 |
cardial valve | 1.10e-09 | 3 |
tunica intima | 1.10e-09 | 3 |
heart layer | 1.10e-09 | 3 |
endocardium | 1.10e-09 | 3 |
endocardial cushion | 1.10e-09 | 3 |
presumptive endocardium | 1.10e-09 | 3 |
tongue | 1.54e-09 | 3 |
gustatory system | 1.54e-09 | 3 |
future tongue | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.43e-14 | 2 |