FFCP PHASE1:Hg19::chr7:81399311..81399323,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3082 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4893 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000465234_5end | |||
|coexpression_cluster_id=C2904 | |||
|description=CAGE_peak_6_at_HGF_5end | |||
|id=chr7:81399311..81399323,- | |||
|ontology_enrichment_celltype=CL:0000055!8.73e-25!180;CL:0000680!1.57e-22!57;CL:0000056!1.57e-22!57;CL:0000355!1.57e-22!57;CL:0000187!1.26e-21!54;CL:0000393!8.11e-20!60;CL:0000211!8.11e-20!60;CL:0000183!2.25e-19!59;CL:0000192!2.17e-15!42;CL:0000514!2.17e-15!42;CL:0000057!2.83e-14!75;CL:0000359!5.88e-10!32;CL:0002494!9.25e-09!16;CL:0000048!2.74e-08!430;CL:0000723!1.58e-07!436;CL:0000034!5.12e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000187;2.56e-15;55!CL:0000192;1.22e-13;43!CL:0000393;1.23e-13;61!CL:0000211;1.23e-13;61!CL:0002494;8.54e-11;16!CL:0000359;1.02e-09;32!CL:0000188;6.09e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,9.52e-28,58;CL:0000056,9.52e-28,58;CL:0000355,9.52e-28,58;CL:0000187,4.75e-27,55;CL:0000393,3.90e-24,61;CL:0000211,3.90e-24,61;CL:0000192,6.98e-18,43;CL:0000514,6.98e-18,43;CL:0000048,4.06e-13,427;CL:0000723,1.83e-12,433;CL:0000057,2.09e-12,76;CL:0000034,1.25e-11,441;CL:0002494,9.65e-11,16;CL:0000359,3.93e-10,32;CL:0000222,1.68e-09,121;CL:0000188,6.56e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000355;1.84e-15;58!CL:0000514;1.22e-13;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.01e-23!83;UBERON:0002329!2.01e-23!83;UBERON:0003077!2.01e-23!83;UBERON:0003059!2.01e-23!83;UBERON:0007282!2.01e-23!83;UBERON:0009618!2.01e-23!83;UBERON:0007285!2.01e-23!83;UBERON:0002385!5.58e-22!63;UBERON:0001015!5.58e-22!63;UBERON:0000383!5.58e-22!63;UBERON:0001134!2.82e-21!61;UBERON:0002036!2.82e-21!61;UBERON:0003082!2.82e-21!61;UBERON:0004290!3.99e-20!70;UBERON:0000486!2.54e-15!82;UBERON:0005256!1.77e-14!143;UBERON:0000481!9.05e-13!347;UBERON:0000475!3.89e-12!365;UBERON:0000948!8.85e-12!24;UBERON:0005498!8.85e-12!24;UBERON:0004140!8.85e-12!24;UBERON:0009881!8.85e-12!24;UBERON:0004141!8.85e-12!24;UBERON:0003084!8.85e-12!24;UBERON:0007005!8.85e-12!24;UBERON:0004139!8.85e-12!24;UBERON:0004291!8.85e-12!24;UBERON:0007100!4.73e-11!27;UBERON:0000477!4.86e-11!286;UBERON:0007023!1.86e-10!115;UBERON:0000483!3.60e-10!309;UBERON:0004872!3.67e-10!84;UBERON:0000119!3.73e-10!312;UBERON:0002204!8.82e-10!167;UBERON:0000468!1.14e-09!659;UBERON:0002100!2.42e-09!216;UBERON:0004111!1.00e-08!241;UBERON:0000479!1.59e-08!787;UBERON:0002050!2.84e-08!605;UBERON:0005423!2.84e-08!605;UBERON:0000923!5.45e-08!604;UBERON:0005291!5.45e-08!604;UBERON:0006598!5.45e-08!604;UBERON:0002532!5.45e-08!604;UBERON:0000922!6.05e-08!612;UBERON:0000467!8.47e-08!625;UBERON:0000480!1.12e-07!626;UBERON:0000025!1.15e-07!194;UBERON:0000490!2.13e-07!138;UBERON:0003104!7.75e-07!238;UBERON:0009142!7.75e-07!238;UBERON:0001637!9.78e-07!42;UBERON:0003509!9.78e-07!42;UBERON:0004572!9.78e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.10e-10;31!UBERON:0001015;2.10e-10;31!UBERON:0000383;2.10e-10;31!UBERON:0000948;2.83e-10;22!UBERON:0007100;1.76e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.29e-25,73;UBERON:0002385,2.59e-25,64;UBERON:0001015,2.59e-25,64;UBERON:0000383,2.59e-25,64;UBERON:0002329,3.85e-25,71;UBERON:0003059,3.85e-25,71;UBERON:0007282,3.85e-25,71;UBERON:0004290,3.85e-25,71;UBERON:0009618,3.85e-25,71;UBERON:0001134,5.70e-25,62;UBERON:0002036,5.70e-25,62;UBERON:0003082,5.70e-25,62;UBERON:0003077,1.45e-24,72;UBERON:0007285,1.45e-24,72;UBERON:0007503,1.94e-21,78;UBERON:0005256,8.84e-21,122;UBERON:0000486,3.58e-20,83;UBERON:0003104,2.88e-19,160;UBERON:0009142,2.88e-19,160;UBERON:0000490,1.53e-12,148;UBERON:0000926,2.52e-12,315;UBERON:0004120,2.52e-12,315;UBERON:0006603,2.52e-12,315;UBERON:0000948,3.60e-12,24;UBERON:0005498,3.60e-12,24;UBERON:0004140,3.60e-12,24;UBERON:0009881,3.60e-12,24;UBERON:0004141,3.60e-12,24;UBERON:0003084,3.60e-12,24;UBERON:0007005,3.60e-12,24;UBERON:0004139,3.60e-12,24;UBERON:0004291,3.60e-12,24;UBERON:0004872,1.12e-11,83;UBERON:0002100,8.06e-11,199;UBERON:0007100,3.37e-10,27;UBERON:0002204,3.86e-10,167;UBERON:0001637,3.72e-08,42;UBERON:0003509,3.72e-08,42;UBERON:0004572,3.72e-08,42;UBERON:0000483,6.86e-08,306;UBERON:0004573,1.23e-07,33;UBERON:0004571,1.23e-07,33;UBERON:0004535,1.25e-07,109;UBERON:0000119,1.31e-07,309;UBERON:0001009,3.85e-07,112;UBERON:0003914,8.89e-07,117 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.563817616383885,2.00146596706261,0,0.872338524100369,0,5.68547886084148,0.261185628199839,0,0,0,0,5.321953177282,2.65117900582333,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0.895661896959697,0.32389366601898,1.03030227053675,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0.659702600373432,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0.16072558669708,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.3233045996527,6.70700859703636,4.2194645408365,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0,0.496971951695318,1.2663051166458,0.264818361626438,10.3261183469573,4.965357350777,0.560677600142307,1.06748995729705,0,14.626918663789,7.13966561969347,8.82694276812677,1.21085942115945,0.576175924479999,3.04617861383936,3.1216007683032,2.85235910772225,10.7603049997297,2.46612447151906,0,0,10.2077085627447,1.71968044236475,8.369388275237,15.4440371446667,5.19260551484969,0.910161361938026,2.15585442544872,5.72342787443825,4.25402967564678,8.03485934904131,3.5118209670467,0.919463387397059,4.8076178850111,3.06266894532057,0.717558542755448,0,1.27159140695737,0.900273288253207,2.78241828943785,1.54584324027377,1.67505170698431,0,0,0.252433774244115,0.552299391853796,0.323292113637624,0,0,0.339121184620975,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,1.47008711385542,0,0,4.72631925345123,0,0,1.02940686179115,0,0,0,0,0.651616610620649,2.07986957055916,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0.126995788584338,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.07333828582095,0.129271715757778,0,6.762422020448,0.531876233169741,1.04007436911366,1.02882949704857,0,0.799266537048298,48.6125178437702,0,0,8.46914079163711,32.3406673355717,3.95975936466715,0.301439377059586,0,0,1.2162378064119,1.00451418286425,0,1.91699884393266,6.89171615004683,1.42636905040718,2.02693829334611,2.26023954805422,0.179060963239896,0,0,0,0,1.01637849688985,9.10978977003352,0,0.502548796003046,1.27587750330633,0,0,0,4.2942022101699,2.50085260529839,0.542530047399471,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,10.5331134904702,0,3.10419213877515,3.98535359121262,1.65932251687533,6.86380554297854,0.195801157462741,0,0.206768026122887,0,0,0,0,0.30239029332968,0.248107807818777,0,0.561320188866147,0,0.511707249066704,0,0,5.39733928309294,5.14929003408069,11.2514203738919,16.6161417338759,6.62399157221768,0,0,0,22.6184462884275,16.9344786246247,14.4236856455367,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,4.32772248920434,0,0,0,0.650060246036521,3.21367859688319,2.32009723901093,2.00263202249038,1.68854042198743,2.61889487720608,4.72649077420404,2.0302337147992,2.64202544989913,1.15741646340759,0,0,0,0,0,1.5740617341532,3.485186350803,4.31247012246524,7.45228442443831,3.47973196830029,0.18532421910392,2.86249773483982,1.116475108079,1.58189712359363,8.95961911441977,0.255897791311334,3.85145089230528,18.7739916276303,1.56989728039846,11.5118372853321,14.0013885165388,8.83593017592648,3.23491970517306,1.58510321173008,0.421258456238981,1.46290121726877,7.55511817856982,0,21.9764857366857,22.0592473847792,14.6910551606316,2.75682671773062,4.64407282668854,4.38450885253763,1.15755106853338,3.27947376023316,0.202910376962704,1.239293992399,2.25356482025793,0.717056761020258,0.294747123039363,0,34.0570621507774,1.47775344708365,0.658589785919804,0,1.39973888097993,0,0,0,3.48332062874083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59663497146253,0,0,0,0,0,0,0,0,0,0,0.425846237690326,2.40453741329035,0,0,0,0,0,0,0,0,0,43.2294648342988,1.02555725490326,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,1.39473591775749,0,0,0,0,0,0,0,0,4.93217028184668,0,0,0.969332746095218,0.556608588971108,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0.87754158861589,0,0,2.46240827212151,0,0,0,0,0,0.0915975934018623,0,0,3.1396051279005,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,0,0,0,0,0.202203398942031,0,0,0,0,0,0.789168805698781,1.20990716048664,0,1.76922422959766,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.581934098930517,0,0,0,0,0.696418755514666,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,5.20111061822734,1.20084057741958,0.410716136675979,0,0,0,1.95497680890578,0.687481272035051,1.43574604915363,0.599037001496973,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0.137539436597234,0,0,0,0.607495566580247,0,1.5761141459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| |||
|short_description=p6@HGF | |||
}} |
Revision as of 17:37, 22 January 2014
Short description: | p6@HGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HGF_5end |
Coexpression cluster: | C2904_Mesenchymal_adenocarcinoma_Cardiac_small_sacrococcigeal_Preadipocyte_Smooth |
Association with transcript: | 0bp_to_ENST00000465234_5end |
EntrezGene: | HGF |
HGNC: | 4893 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 9.52e-28 | 58 |
myoblast | 9.52e-28 | 58 |
multi-potent skeletal muscle stem cell | 9.52e-28 | 58 |
muscle cell | 4.75e-27 | 55 |
electrically responsive cell | 3.90e-24 | 61 |
electrically active cell | 3.90e-24 | 61 |
smooth muscle cell | 6.98e-18 | 43 |
smooth muscle myoblast | 6.98e-18 | 43 |
multi fate stem cell | 4.06e-13 | 427 |
somatic stem cell | 1.83e-12 | 433 |
fibroblast | 2.09e-12 | 76 |
stem cell | 1.25e-11 | 441 |
cardiocyte | 9.65e-11 | 16 |
vascular associated smooth muscle cell | 3.93e-10 | 32 |
mesodermal cell | 1.68e-09 | 121 |
cell of skeletal muscle | 6.56e-08 | 9 |