FFCP PHASE1:Mm9::chr4:44180301..44180312,-: Difference between revisions
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{{FFCP|EntrezGene=73469|HGNC=|MCL_coexpression_id=0|UniProt=|association_with_transcript=51bp_to_ENSMUST00000147302_5end|description=CAGE_peak_19_at_Rnf38_5end|id=chr4:44180301..44180312,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,1.33e-15,1;CL:0002078,1.33e-15,1;CL:0000115,1.33e-15,1;CL:0002262,1.33e-15,1;CL:1000398,1.33e-15,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.33e-15,1;UBERON:0001281,1.33e-15,1;UBERON:0000353,1.33e-15,1;UBERON:0003497,1.33e-15,1;UBERON:0003909,1.33e-15,1;UBERON:0003928,1.33e-15,1;UBERON:0003835,1.33e-15,1;UBERON:0003513,1.33e-15,1;UBERON:0001280,1.33e-15,1;UBERON:0004647,1.33e-15,1;UBERON:0002294,1.33e-15,1;UBERON:0001173,1.33e-15,1;UBERON:0004912,1.33e-15,1;UBERON:0005171,1.33e-15,1;UBERON:0000473,3.81e-10,14;UBERON:0003135,1.62e-09,15;UBERON:0003101,5.75e-09,16;UBERON:0000079,5.75e-09,16;UBERON:0004176,1.76e-08,17;UBERON:0009196,1.76e-08,17;UBERON:0009117,1.76e-08,17;UBERON:0000991,4.78e-08,18;UBERON:0005564,4.78e-08,18|phase1_expression=0.160148847104794,0.348975407639361,0,0.60492842261366,0.500895729946347,0.33575854382378,0,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,2.38121212422995,0.397163804803541,0.522399578277871,0,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,1.73310971850765,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.381210681219194,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.248813941220186,0.758168275301024,0,0.260240885925407,0.229902104433473,0,0,0.136072998302656,0.512454881139399,0,0,0.215567992932842,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0.793351699990633,0.213288250535234,0,0.515469845288373,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0.147610147979602,0,0,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0.486405680325106,0,0,0,0,0.252578877947112,0,0,0,0.37898282354097,0.325929952884052,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.900305470156551,0.129358683782755,0,0,0.713475270408282,0.164549020602121,0.304464949114599,0.469343416127421,0,0.882113592219848,0.32977250588296,0.484393280087717,0.180938774784468,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0.509935289981566,0.419854356970974,0.138199973804424,0,0.316335993581135,0.406638934253697,0.540026704109006,0.418176592028937,0,0,0.0826534557253359,0,0.129614973291793,0,12.9649375897364,0,0,0,0,0,0,0.13020438484395,0,1.20792060413003,13.8254403003775,0.632022241256357,0.202725215290164,0.410843828659309,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.886137163047463,0.100966449948148,0.381034033274999,0.201652370273681,0.0974578807397524,0.481059208201647,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0,0,0,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0,0,0,0,0.114870937911227,0,0.231768651889711,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p19@Rnf38}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:73469 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=51bp_to_ENSMUST00000147302_5end | |||
|cluster_id=chr4:44180301..44180312,- | |||
|description=CAGE_peak_19_at_Rnf38_5end | |||
|id=chr4:44180301..44180312,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.33e-15,1;CL:0002078,1.33e-15,1;CL:0000115,1.33e-15,1;CL:0002262,1.33e-15,1;CL:1000398,1.33e-15,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.33e-15,1;UBERON:0001281,1.33e-15,1;UBERON:0000353,1.33e-15,1;UBERON:0003497,1.33e-15,1;UBERON:0003909,1.33e-15,1;UBERON:0003928,1.33e-15,1;UBERON:0003835,1.33e-15,1;UBERON:0003513,1.33e-15,1;UBERON:0001280,1.33e-15,1;UBERON:0004647,1.33e-15,1;UBERON:0002294,1.33e-15,1;UBERON:0001173,1.33e-15,1;UBERON:0004912,1.33e-15,1;UBERON:0005171,1.33e-15,1;UBERON:0000473,3.81e-10,14;UBERON:0003135,1.62e-09,15;UBERON:0003101,5.75e-09,16;UBERON:0000079,5.75e-09,16;UBERON:0004176,1.76e-08,17;UBERON:0009196,1.76e-08,17;UBERON:0009117,1.76e-08,17;UBERON:0000991,4.78e-08,18;UBERON:0005564,4.78e-08,18 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0.60492842261366,0.500895729946347,0.33575854382378,0,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,2.38121212422995,0.397163804803541,0.522399578277871,0,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,1.73310971850765,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.381210681219194,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.248813941220186,0.758168275301024,0,0.260240885925407,0.229902104433473,0,0,0.136072998302656,0.512454881139399,0,0,0.215567992932842,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0.793351699990633,0.213288250535234,0,0.515469845288373,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.189709611372772,0.147610147979602,0,0,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0.486405680325106,0,0,0,0,0.252578877947112,0,0,0,0.37898282354097,0.325929952884052,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.900305470156551,0.129358683782755,0,0,0.713475270408282,0.164549020602121,0.304464949114599,0.469343416127421,0,0.882113592219848,0.32977250588296,0.484393280087717,0.180938774784468,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0.509935289981566,0.419854356970974,0.138199973804424,0,0.316335993581135,0.406638934253697,0.540026704109006,0.418176592028937,0,0,0.0826534557253359,0,0.129614973291793,0,12.9649375897364,0,0,0,0,0,0,0.13020438484395,0,1.20792060413003,13.8254403003775,0.632022241256357,0.202725215290164,0.410843828659309,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.886137163047463,0.100966449948148,0.381034033274999,0.201652370273681,0.0974578807397524,0.481059208201647,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0,0,0,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0,0,0,0,0.114870937911227,0,0.231768651889711,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p19@Rnf38 | |||
}} |
Revision as of 12:20, 5 August 2015
Short description: | p19@Rnf38 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_Rnf38_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 51bp_to_ENSMUST00000147302_5end |
EntrezGene: | 73469 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.33e-15 | 1 |
meso-epithelial cell | 1.33e-15 | 1 |
endothelial cell | 1.33e-15 | 1 |
endothelial cell of sinusoid | 1.33e-15 | 1 |
endothelial cell of hepatic sinusoid | 1.33e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.33e-15 | 1 |
hepatic sinusoid | 1.33e-15 | 1 |
parenchyma | 1.33e-15 | 1 |
abdomen blood vessel | 1.33e-15 | 1 |
sinusoid | 1.33e-15 | 1 |
digestive system duct | 1.33e-15 | 1 |
abdominal segment blood vessel | 1.33e-15 | 1 |
trunk blood vessel | 1.33e-15 | 1 |
liver parenchyma | 1.33e-15 | 1 |
liver lobule | 1.33e-15 | 1 |
biliary system | 1.33e-15 | 1 |
biliary tree | 1.33e-15 | 1 |
biliary bud | 1.33e-15 | 1 |
hepatic duct | 1.33e-15 | 1 |
testis | 3.81e-10 | 14 |
male reproductive organ | 1.62e-09 | 15 |
male organism | 5.75e-09 | 16 |
male reproductive system | 5.75e-09 | 16 |
external genitalia | 1.76e-08 | 17 |
indifferent external genitalia | 1.76e-08 | 17 |
indifferent gonad | 1.76e-08 | 17 |
gonad | 4.78e-08 | 18 |
gonad primordium | 4.78e-08 | 18 |