FFCP PHASE1:Hg19::chr8:41166927..41166938,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6422 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10776 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=41bp_to_uc003xnt.2_5end | |||
|coexpression_cluster_id=C863 | |||
|description=CAGE_peak_2_at_SFRP1_5end | |||
|id=chr8:41166927..41166938,- | |||
|ontology_enrichment_celltype=CL:0000055!2.06e-17!180;CL:0000057!1.07e-12!75;CL:0000192!1.24e-11!42;CL:0000514!1.24e-11!42;CL:0000393!7.35e-11!60;CL:0000211!7.35e-11!60;CL:0000183!7.40e-11!59;CL:0000187!2.41e-10!54;CL:0000680!4.22e-10!57;CL:0000056!4.22e-10!57;CL:0000355!4.22e-10!57;CL:0000359!3.96e-09!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.07e-09;32!CL:0000192;1.85e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.79e-11,43;CL:0000514,3.79e-11,43;CL:0000057,5.78e-10,76;CL:0000359,2.09e-09,32;CL:0000393,1.36e-07,61;CL:0000211,1.36e-07,61;CL:0000187,5.88e-07,55;CL:0000680,9.19e-07,58;CL:0000056,9.19e-07,58;CL:0000355,9.19e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.85e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.69e-21!365;UBERON:0000468!2.05e-17!659;UBERON:0000467!2.69e-14!625;UBERON:0000480!4.14e-14!626;UBERON:0000481!6.32e-14!347;UBERON:0000119!4.68e-13!312;UBERON:0000483!8.40e-13!309;UBERON:0004121!3.48e-12!169;UBERON:0000914!4.24e-12!83;UBERON:0002329!4.24e-12!83;UBERON:0003077!4.24e-12!83;UBERON:0003059!4.24e-12!83;UBERON:0007282!4.24e-12!83;UBERON:0009618!4.24e-12!83;UBERON:0007285!4.24e-12!83;UBERON:0000924!1.62e-11!173;UBERON:0006601!1.62e-11!173;UBERON:0000922!1.72e-11!612;UBERON:0004290!4.28e-11!70;UBERON:0001444!1.42e-10!48;UBERON:0002385!2.10e-10!63;UBERON:0001015!2.10e-10!63;UBERON:0000383!2.10e-10!63;UBERON:0001134!4.19e-10!61;UBERON:0002036!4.19e-10!61;UBERON:0003082!4.19e-10!61;UBERON:0002100!9.62e-10!216;UBERON:0002050!1.01e-09!605;UBERON:0005423!1.01e-09!605;UBERON:0001456!1.35e-09!21;UBERON:0003102!1.61e-09!95;UBERON:0000923!2.27e-09!604;UBERON:0005291!2.27e-09!604;UBERON:0006598!2.27e-09!604;UBERON:0002532!2.27e-09!604;UBERON:0005085!5.48e-09!29;UBERON:0000064!7.08e-09!219;UBERON:0000477!8.58e-09!286;UBERON:0000062!8.99e-09!511;UBERON:0000970!1.11e-08!20;UBERON:0003075!1.24e-08!86;UBERON:0007284!1.24e-08!86;UBERON:0000019!2.14e-08!19;UBERON:0000047!2.14e-08!19;UBERON:0004088!2.14e-08!19;UBERON:0003072!2.14e-08!19;UBERON:0003071!2.14e-08!19;UBERON:0004128!2.14e-08!19;UBERON:0004111!3.06e-08!241;UBERON:0000033!3.30e-08!123;UBERON:0000020!3.66e-08!23;UBERON:0004573!3.95e-08!33;UBERON:0004571!3.95e-08!33;UBERON:0000486!5.50e-08!82;UBERON:0000153!6.29e-08!129;UBERON:0007811!6.29e-08!129;UBERON:0002104!6.93e-08!21;UBERON:0002346!7.66e-08!90;UBERON:0005256!7.79e-08!143;UBERON:0007625!1.51e-07!11;UBERON:0001032!1.79e-07!24;UBERON:0004456!1.79e-07!24;UBERON:0004923!2.37e-07!57;UBERON:0004872!3.06e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001456;3.83e-11;21!UBERON:0007625;7.48e-11;11!UBERON:0004573;5.20e-10;33!UBERON:0004571;5.20e-10;33!UBERON:0000970;6.48e-10;20!UBERON:0000019;1.82e-09;19!UBERON:0000047;1.82e-09;19!UBERON:0004088;1.82e-09;19!UBERON:0010230;1.82e-09;19!UBERON:0002104;3.29e-09;21!UBERON:0000020;5.19e-09;23!UBERON:0001032;2.00e-08;24!UBERON:0004456;2.00e-08;24!UBERON:0001444;6.74e-08;48!UBERON:0000033;2.20e-07;50!UBERON:0001801;4.08e-07;14!UBERON:0007811;5.34e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001444,2.53e-11,49;UBERON:0004573,2.79e-11,33;UBERON:0004571,2.79e-11,33;UBERON:0007625,6.49e-11,11;UBERON:0001456,2.09e-10,22;UBERON:0000033,9.28e-10,56;UBERON:0005085,1.17e-09,31;UBERON:0000970,3.42e-09,21;UBERON:0002104,3.42e-09,21;UBERON:0000019,9.09e-09,20;UBERON:0000047,9.09e-09,20;UBERON:0010312,9.09e-09,20;UBERON:0004088,9.09e-09,20;UBERON:0010230,9.09e-09,20;UBERON:0003072,9.09e-09,20;UBERON:0004128,9.09e-09,20;UBERON:0003071,9.09e-09,20;UBERON:0004923,1.14e-08,66;UBERON:0000153,1.30e-08,62;UBERON:0007811,1.30e-08,62;UBERON:0000020,1.88e-08,24;UBERON:0001032,1.88e-08,24;UBERON:0004456,1.88e-08,24;UBERON:0001637,2.13e-08,42;UBERON:0003509,2.13e-08,42;UBERON:0004572,2.13e-08,42;UBERON:0003102,1.08e-07,99;UBERON:0007524,1.60e-07,73;UBERON:0002329,2.95e-07,71;UBERON:0003059,2.95e-07,71;UBERON:0007282,2.95e-07,71;UBERON:0004290,2.95e-07,71;UBERON:0009618,2.95e-07,71;UBERON:0001801,4.78e-07,14;UBERON:0003077,4.95e-07,72;UBERON:0007285,4.95e-07,72 | |||
|phase1_expression=2.54349730978779,2.78330681058278,3.94672331468719,3.00219895059391,2.23480547213644,15.7020934338066,0,0,0.261185628199839,3.68600904752263,0,12.8880409556802,18.1999214977633,1.60896258848061,0.662794751455832,0,1.20538905604795,1.46062018077475,1.46379839637152,5.90981078768582,11.6280394009224,6.26909442956176,1.43117993565528,4.51685602740518,1.38096903554283,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,29.5893977723532,28.8248216701333,39.0864796334411,1.24430121722827,0.728590576585084,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0.732186172644509,0,0,0.17859945656816,0.22452937262617,0,0,0.949265659568129,0.183201743930407,0,0,2.18047026071267,0.496971951695318,0.759783069987479,1.85372853138506,6.59724227722272,6.02936249737207,0,0,0,0.933633106199299,0,0.490385709340376,0.454072282934794,0,1.17160715916898,2.18512053781224,2.85235910772225,1.49448680551801,0.939475989150119,0.485618833104395,1.26405726032024,3.87892925384297,6.1417158655884,5.16628905878827,3.56400857184616,2.71993622206413,0,0.718618141816238,1.68336113954066,1.25118519871964,3.60183350129438,2.63386572528503,0,4.20666564938471,0.453728732640084,0.179389635688862,0.427114777637135,5.08636562782948,3.00091096084402,1.95799805553034,0,0,3.03797398034279,6.33340533547791,0.504867548488229,1.19664868234989,1.2931684545505,2.4850671476163,1.41052937518696,1.69560592310488,0,0,0,0.975789649036763,4.77107165957347,1.51052125730374,1.34759371519982,1.51392510525377,2.55484151353081,0,1.28648187638577,0,2.78620756819187,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,23.3332222005995,0.878002283269004,0,0.703702806881416,0.370353780634118,0.651616610620649,7.27954349695705,31.7528952455601,13.2160661671588,10.9190085639314,0,0,0.380508304469197,0,0,0,0,0,0,0,0,2.50763863567975,4.94077695473735,4.98397482914775,0,0,0.414656231081544,0,0.25248486685276,0,0,0,0,0.411309970813294,0,0,2.01835951821649,0,0.95339771567235,0.387815147273333,0,0,0.531876233169741,1.04007436911366,0.514414748524284,2.83698264046557,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,1.30303176000821,0.205476322550383,0,0,0,0,0,3.55732473911449,5.20559415430487,0,0.837581326671744,0,0,0,0,0.24538298343828,0,2.44138521329762,1.24782516918484,0,0,1.40569697991256,0.902838299183157,0,1.03473071292505,0,0.368738337083406,6.16873662723388,0.783204629850962,0.686286847621712,0,0,0,0,23.3009615314696,3.93107381328584,1.98486246255021,3.06923946576125,2.24528075546459,4.22859192543813,3.07024349440022,1.44768529029247,11.8734453155993,0.616838775210622,0.355123450626254,0.657017248110473,14.5391240171414,0.116210378459959,0,2.40607764363942,1.93370076765382,1.37777337797528,9.10455840033585,6.29397191805236,0.451199612907412,0.616122696835318,0,5.84556898613043,1.26661954671451,0,0.170093705276516,0.215915916102139,0,0.812839312631559,0.501689773854853,1.78413391131527,3.3243040357149,1.79099803777743,0,0,2.82095137628028,13.7766151193876,7.48370307727897,0.309123034943167,0,0,0.574265537996172,3.25030123018261,11.2478750890912,0.290012154876366,0.616194468458578,0.614014698904518,0.137836572484531,0.107420244868274,0.145016693914229,0.340906509664404,0.178064071293475,0,1.15314040419064,0.382838137483752,0.30347334256665,23.2422774648643,62.6476570192974,21.6081553749786,0.616067160352178,2.12922412126809,19.1385258256516,2.59453906745488,0.143124886741991,1.86079184679834,0,0.762520775695299,2.303080121802,0,7.63687795022248,1.56989728039846,1.07923474549989,0,0.942499218765491,2.02182481573316,1.58510321173008,1.68503382495592,0.975267478179181,5.84912375115083,3.16950440270266,3.68549760801562,1.27264888758341,13.5609739944291,16.5409603063837,9.28814565337708,10.5228212460903,2.89387767133344,5.24715801637306,0,0.6196469961995,0.281695602532241,0.860468113224309,0.196498082026242,0,1.41904425628239,1.26664581178598,0.329294892959902,1.13841952129715,0,0.0962221127255121,1.34060455107157,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,1.19372242368845,0.296964680832639,0,0,0,0,0,0,3.18796781201712,0,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0.0927680981618513,0,0,0,2.17499872630438,0,0,0,0,0,0.173624994933292,0,0.482385754501632,1.52581736317083,0.774054819518572,0.295547618953547,0.438770794307945,0,0,4.61701551022782,0,0,2.60297168788339,0.108647371922008,5.42301971544263,2.56473261525214,12.2597998484286,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0.593042257361244,1.48276726735803,1.14864144456001,1.41542379259422,0.802577647298789,0.702793337176017,0,0,0,1.18375320854817,1.20990716048664,0.91821828489147,0.88461211479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| |||
|short_description=p2@SFRP1 | |||
}} |
Revision as of 21:48, 22 January 2014
Short description: | p2@SFRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SFRP1_5end |
Coexpression cluster: | C863_leiomyoma_Smooth_Ciliary_Lens_chorionic_Amniotic_Iris |
Association with transcript: | 41bp_to_uc003xnt.2_5end |
EntrezGene: | SFRP1 |
HGNC: | 10776 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.79e-11 | 43 |
smooth muscle myoblast | 3.79e-11 | 43 |
fibroblast | 5.78e-10 | 76 |
vascular associated smooth muscle cell | 2.09e-09 | 32 |
electrically responsive cell | 1.36e-07 | 61 |
electrically active cell | 1.36e-07 | 61 |
muscle cell | 5.88e-07 | 55 |
muscle precursor cell | 9.19e-07 | 58 |
myoblast | 9.19e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.19e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
subdivision of head | 2.53e-11 | 49 |
systemic artery | 2.79e-11 | 33 |
systemic arterial system | 2.79e-11 | 33 |
pigment epithelium of eye | 6.49e-11 | 11 |
face | 2.09e-10 | 22 |
head | 9.28e-10 | 56 |
ectodermal placode | 1.17e-09 | 31 |
eye | 3.42e-09 | 21 |
visual system | 3.42e-09 | 21 |
camera-type eye | 9.09e-09 | 20 |
simple eye | 9.09e-09 | 20 |
immature eye | 9.09e-09 | 20 |
ocular region | 9.09e-09 | 20 |
eyeball of camera-type eye | 9.09e-09 | 20 |
optic cup | 9.09e-09 | 20 |
optic vesicle | 9.09e-09 | 20 |
eye primordium | 9.09e-09 | 20 |
organ component layer | 1.14e-08 | 66 |
anterior region of body | 1.30e-08 | 62 |
craniocervical region | 1.30e-08 | 62 |
sense organ | 1.88e-08 | 24 |
sensory system | 1.88e-08 | 24 |
entire sense organ system | 1.88e-08 | 24 |
artery | 2.13e-08 | 42 |
arterial blood vessel | 2.13e-08 | 42 |
arterial system | 2.13e-08 | 42 |
surface structure | 1.08e-07 | 99 |
dense mesenchyme tissue | 1.60e-07 | 73 |
somite | 2.95e-07 | 71 |
presomitic mesoderm | 2.95e-07 | 71 |
presumptive segmental plate | 2.95e-07 | 71 |
dermomyotome | 2.95e-07 | 71 |
trunk paraxial mesoderm | 2.95e-07 | 71 |
anterior segment of eyeball | 4.78e-07 | 14 |
paraxial mesoderm | 4.95e-07 | 72 |
presumptive paraxial mesoderm | 4.95e-07 | 72 |