FFCP PHASE1:Hg19::chr8:54934823..54934875,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6917 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11612 | |||
|TSSclassifier=strong | |||
|UniProt=E5RFI1,B7Z4S1 | |||
|association_with_transcript=0bp_to_ENST00000517351,ENST00000518310,ENST00000521086,ENST00000522635_5end | |||
|description=CAGE_peak_1_at_TCEA1_5end | |||
|id=chr8:54934823..54934875,- | |||
|ontology_enrichment_celltype=CL:0000945!6.00e-08!24;CL:0000826!6.00e-08!24;CL:0000542!8.87e-08!53;CL:0000051!8.87e-08!53;CL:0000838!1.95e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.66e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.00e-08,24;CL:0000826,6.00e-08,24;CL:0000542,8.87e-08,53;CL:0000051,8.87e-08,53;CL:0000838,1.95e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.08e-43!235;DOID:14566!5.33e-42!239;DOID:0050687!8.60e-25!143;DOID:0050686!1.55e-24!137;DOID:305!2.13e-15!106;DOID:2531!1.38e-13!51;DOID:0060083!1.38e-13!51;DOID:1240!3.15e-09!39;DOID:3095!9.62e-08!22;DOID:2994!9.62e-08!22;DOID:8692!1.15e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;6.63e-08;51!DOID:0060083;6.63e-08;51!DOID:3095;1.04e-07;22!DOID:2994;1.04e-07;22!DOID:8692;1.63e-07;31!DOID:1240;2.90e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.08e-43,235;DOID:14566,5.33e-42,239;DOID:0050687,8.60e-25,143;DOID:0050686,1.55e-24,137;DOID:305,2.13e-15,106;DOID:2531,1.38e-13,51;DOID:0060083,1.38e-13,51;DOID:1240,3.15e-09,39;DOID:3095,9.62e-08,22;DOID:2994,9.62e-08,22;DOID:8692,1.15e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=29.6135758211007,23.5510576280081,30.7280600929217,16.0117277365009,25.9237434767827,17.4467704820074,22.796989035148,17.6881564559513,13.8428382945914,4.91467873003018,5.58240934377942,7.42700665242586,6.06664049925443,20.5452145913677,17.2326635378516,8.0679017574213,11.4511960324556,16.0668219885222,18.5414463540393,8.125989833068,5.91602004608334,9.40364164434263,36.9244423399063,27.6486338647226,29.1258923859942,45.9244568545187,41.6249988511225,45.8096747245613,9.04737836752479,24.9489108763188,16.1008768248719,13.7913183671839,10.2410012384605,27.7315507625091,79.094011792488,94.9690473015976,23.4880351467878,18.8358438900838,20.4555336419545,23.6541849080278,25.9741950118312,26.5592806135563,23.439376654711,9.59628375945127,12.4699061417307,8.9756102639492,9.0647324393217,6.98985409637104,6.19412741790207,7.48000220037591,7.94098190240212,4.49316236788312,9.99762474136194,7.10033151942209,4.06279459783025,8.094420600332,6.5497476013883,7.19115150224271,9.18251677112708,7.70229664982625,10.8687311385837,9.23583640522805,10.9705011691898,7.6720455095885,8.41606792022894,7.37600792098482,6.85104473895132,7.78870862295904,7.82224377630302,5.64690996233303,13.3187890579341,6.99727508376373,9.17740923578565,9.50648788403738,10.2050063983221,9.85395633889367,11.6821776392355,11.563620748796,14.4653028027372,8.55038231223746,13.7252507267372,8.95054353446706,52.7988733383968,42.5988116784463,38.2488979161329,33.7116875827541,52.8522702887536,36.2094037171324,36.3574680031674,41.0243114450207,19.9224539188307,21.7277760067247,37.8450495843977,18.5039860010636,17.9362740154092,25.0214880536323,36.5880172411729,26.7247318669432,29.6066158559293,17.8889550068026,15.9701910650459,18.4644644236546,25.3274746930285,19.0511881273647,23.568472597987,22.1533894583621,23.5599361475564,24.465442067604,20.9395549571404,16.2793525557639,15.1992509782217,14.2003512010176,18.6841069584196,17.3901538258314,18.8163942848958,20.0557536574692,24.142891096921,17.5249997196141,26.8200873540673,25.4852331459277,25.3922547004003,21.8603970223126,22.2851176235104,26.2372552866558,28.7340671070395,30.0707110095901,22.1704559168683,30.6442249701593,27.0114597741342,35.0475057396374,17.0664806419773,14.75541891348,36.9522803727803,37.9511110003795,29.5789367275175,45.7714999916203,25.4491503056352,36.9842501430003,24.9571917313139,23.5033161310318,26.6139400650172,16.9617902769538,6.19301990097322,8.15725774125745,18.499201438317,19.6766603148172,17.1515769069336,35.0581217728853,41.1836335761692,34.17409012232,21.8638648103376,17.2046919021225,16.3156035755569,27.1347812123525,6.71199097935849,18.1577907680445,17.1375872560185,21.4485910110543,10.3172216179146,19.4137955403509,9.66790361061953,11.4040815857777,14.8877855104383,21.3244586600604,14.5825550618717,26.4327195720876,37.047346483318,43.0175855446291,13.7984973719295,10.4419222552494,18.6865778809015,3.9534125230819,3.87780264148325,5.23312862571041,63.1154378653055,30.3913227994991,9.40105183773854,16.6365240034312,38.6588536596209,25.7911696065461,11.7423895302675,16.2800581955326,22.0959835133834,35.6983280984673,22.2308188234304,9.08144565869588,13.82822218752,18.5113931148699,16.544484072007,15.4027391817001,26.9007624993242,33.2339631161855,30.9177323743131,26.2643008533205,21.4361879817638,25.426703683536,55.6925960537376,46.3321114340001,64.2894016124248,2.73048408581408,6.46756327634615,31.6471894233644,34.908067044278,23.8275139316397,30.2894558407778,34.3266331294902,48.5268930268308,20.6446573351238,8.9694817844431,45.0606090407177,36.4522869994446,9.30282397861647,26.999762660471,19.8383215835134,30.5231644383807,15.189869901714,33.4208927702911,11.6119536152293,39.7655562134733,21.3372795000832,12.7803453305981,23.6767430834955,17.4647410079802,17.9732593441866,19.6377206825401,13.4798159832832,58.3034315299466,54.8673240850949,47.523322633633,45.1962199867015,39.362052736598,29.9281434442181,4.69348596989448,18.6539872075937,15.1948413487729,13.0023019848954,7.21879481669586,19.4023152065344,18.0385618383569,18.5578493010281,17.5367416644506,19.3912705242241,22.066167577332,19.2808770669035,19.0334821171586,21.9305879459443,8.11971000087113,7.01208869017229,5.7620361586396,8.82052268313252,21.5483559197112,20.6393715502301,31.9026549607958,38.8487527484892,33.9448090378993,12.8675857723894,13.4992851052609,14.6122279234905,37.0951908198918,31.294894463583,20.2001149292401,5.19967392639789,8.6598805215164,27.9392275989935,31.7003474436718,15.591576358196,10.648666789262,15.2203321787679,14.223679163267,6.00940313466411,21.1746625235162,12.1682217872404,18.578895286091,9.3733833986777,12.9346238713122,11.2002326821485,43.4358835108814,29.0633938513962,16.8688378832693,35.9644163664039,24.8296583917297,18.8668585142103,20.0326735249576,15.0228495777392,18.6683809218977,11.0776643411901,10.5495702489042,13.6857956818164,19.2287411355215,10.812350082381,16.0062802273124,8.63409349459278,18.3103228909978,23.6149280343459,24.6908977097356,7.1531289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| |||
|short_description=p1@TCEA1 | |||
}} |
Revision as of 22:03, 22 January 2014
Short description: | p1@TCEA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCEA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000517351, ENST00000518310, ENST00000521086, ENST00000522635_5end |
EntrezGene: | TCEA1 |
HGNC: | 11612 |
UniProt: | E5RFI1B7Z4S1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.00e-08 | 24 |
pro-B cell | 6.00e-08 | 24 |
lymphocyte | 8.87e-08 | 53 |
common lymphoid progenitor | 8.87e-08 | 53 |
lymphoid lineage restricted progenitor cell | 1.95e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.08e-43 | 235 |
disease of cellular proliferation | 5.33e-42 | 239 |
cell type cancer | 8.60e-25 | 143 |
organ system cancer | 1.55e-24 | 137 |
carcinoma | 2.13e-15 | 106 |
hematologic cancer | 1.38e-13 | 51 |
immune system cancer | 1.38e-13 | 51 |
leukemia | 3.15e-09 | 39 |
germ cell and embryonal cancer | 9.62e-08 | 22 |
germ cell cancer | 9.62e-08 | 22 |
myeloid leukemia | 1.15e-07 | 31 |