FFCP PHASE1:Mm9::chr5:144811498..144811515,-: Difference between revisions
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{{FFCP|EntrezGene=18261|HGNC=|MCL_coexpression_id=126|UniProt=P51879|association_with_transcript=-20bp_to_NM_033039,uc009alf.1_5end|description=CAGE_peak_1_at_Ocm_5end|id=chr5:144811498..144811515,-|ontology_enrichment_celltype=CL:0000239!1.04e-14!6;CL:0000677!1.04e-14!6;CL:0000212!1.04e-14!6;CL:0000584!1.04e-14!6;CL:0002563!1.41e-12!9;CL:0002251!1.41e-12!9;CL:0000075!1.65e-12!7;CL:0000473!1.75e-08!3;CL:0000627!1.75e-08!3;CL:0000682!1.75e-08!3;CL:0000066!3.66e-08!25;CL:0002076!3.83e-07!15|ontology_enrichment_celltype_v019_2=CL:0000682,3.30e-12,3;CL:0000239,1.35e-10,6;CL:0000677,1.35e-10,6;CL:0000584,1.35e-10,6;CL:0000075,4.23e-09,7;CL:0002563,4.25e-07,9;CL:0002251,4.25e-07,9;CL:0000066,8.03e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.02e-26!15;UBERON:0001242!7.80e-22!13;UBERON:0000060!7.80e-22!13;UBERON:0001262!7.80e-22!13;UBERON:0004786!7.80e-22!13;UBERON:0000160!7.17e-20!43;UBERON:0004923!3.22e-15!24;UBERON:0005409!3.49e-13!59;UBERON:0003350!1.41e-12!9;UBERON:0004808!1.41e-12!9;UBERON:0001277!1.41e-12!9;UBERON:0000485!4.17e-10!11;UBERON:0000331!4.53e-09!3;UBERON:0002116!4.53e-09!3;UBERON:0001204!4.53e-09!3;UBERON:0001168!4.53e-09!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.37e-30,31;UBERON:0000344,1.93e-24,15;UBERON:0005409,4.76e-19,47;UBERON:0001242,1.53e-18,13;UBERON:0001262,1.53e-18,13;UBERON:0004786,1.53e-18,13;UBERON:0002108,1.04e-16,4;UBERON:0004923,1.12e-14,24;UBERON:0000331,4.15e-13,3;UBERON:0002116,4.15e-13,3;UBERON:0001204,4.15e-13,3;UBERON:0001168,4.15e-13,3;UBERON:0001155,4.18e-09,2;UBERON:0000059,4.18e-09,2;UBERON:0001962,3.51e-08,2;UBERON:0001961,3.51e-08,2;UBERON:0001744,3.51e-08,2;UBERON:0001007,6.30e-08,116;UBERON:0001555,6.30e-08,116;UBERON:0007026,6.30e-08,116;UBERON:0004119,9.77e-08,118;UBERON:0000925,9.77e-08,118;UBERON:0006595,9.77e-08,118;UBERON:0003350,4.25e-07,9;UBERON:0004808,4.25e-07,9;UBERON:0001277,4.25e-07,9|phase1_expression=0,3.48975407639361,4.09499315450582,8.16653370528441,9.01612313903425,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,2.98232065387321,5.16808767703518,6.8921919385452,3.878482188346,46.1756909278989,30.2436155711917,4.8780712344167,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,16.6047085885584,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,0,0,0,1.05220927943237,0,0,0,0,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,2.90895623329899,0,0,0,0,0,0,18.506633400236,0,0,0.397912944082302,0,15.2799299471218,11.0230405436094,9.35963984295526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70405924248657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Ocm}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18261 | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P51879 | |||
|association_with_transcript=-20bp_to_NM_033039,uc009alf.1_5end | |||
|cluster_id=chr5:144811498..144811515,- | |||
|description=CAGE_peak_1_at_Ocm_5end | |||
|id=chr5:144811498..144811515,- | |||
|ontology_enrichment_celltype=CL:0000239!1.04e-14!6;CL:0000677!1.04e-14!6;CL:0000212!1.04e-14!6;CL:0000584!1.04e-14!6;CL:0002563!1.41e-12!9;CL:0002251!1.41e-12!9;CL:0000075!1.65e-12!7;CL:0000473!1.75e-08!3;CL:0000627!1.75e-08!3;CL:0000682!1.75e-08!3;CL:0000066!3.66e-08!25;CL:0002076!3.83e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.30e-12,3;CL:0000239,1.35e-10,6;CL:0000677,1.35e-10,6;CL:0000584,1.35e-10,6;CL:0000075,4.23e-09,7;CL:0002563,4.25e-07,9;CL:0002251,4.25e-07,9;CL:0000066,8.03e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.02e-26!15;UBERON:0001242!7.80e-22!13;UBERON:0000060!7.80e-22!13;UBERON:0001262!7.80e-22!13;UBERON:0004786!7.80e-22!13;UBERON:0000160!7.17e-20!43;UBERON:0004923!3.22e-15!24;UBERON:0005409!3.49e-13!59;UBERON:0003350!1.41e-12!9;UBERON:0004808!1.41e-12!9;UBERON:0001277!1.41e-12!9;UBERON:0000485!4.17e-10!11;UBERON:0000331!4.53e-09!3;UBERON:0002116!4.53e-09!3;UBERON:0001204!4.53e-09!3;UBERON:0001168!4.53e-09!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.37e-30,31;UBERON:0000344,1.93e-24,15;UBERON:0005409,4.76e-19,47;UBERON:0001242,1.53e-18,13;UBERON:0001262,1.53e-18,13;UBERON:0004786,1.53e-18,13;UBERON:0002108,1.04e-16,4;UBERON:0004923,1.12e-14,24;UBERON:0000331,4.15e-13,3;UBERON:0002116,4.15e-13,3;UBERON:0001204,4.15e-13,3;UBERON:0001168,4.15e-13,3;UBERON:0001155,4.18e-09,2;UBERON:0000059,4.18e-09,2;UBERON:0001962,3.51e-08,2;UBERON:0001961,3.51e-08,2;UBERON:0001744,3.51e-08,2;UBERON:0001007,6.30e-08,116;UBERON:0001555,6.30e-08,116;UBERON:0007026,6.30e-08,116;UBERON:0004119,9.77e-08,118;UBERON:0000925,9.77e-08,118;UBERON:0006595,9.77e-08,118;UBERON:0003350,4.25e-07,9;UBERON:0004808,4.25e-07,9;UBERON:0001277,4.25e-07,9 | |||
|phase1_expression=0,3.48975407639361,4.09499315450582,8.16653370528441,9.01612313903425,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,2.98232065387321,5.16808767703518,6.8921919385452,3.878482188346,46.1756909278989,30.2436155711917,4.8780712344167,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,16.6047085885584,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,0,0,0,1.05220927943237,0,0,0,0,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,2.90895623329899,0,0,0,0,0,0,18.506633400236,0,0,0.397912944082302,0,15.2799299471218,11.0230405436094,9.35963984295526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70405924248657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Ocm | |||
}} |
Revision as of 00:55, 4 August 2015
Short description: | p1@Ocm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ocm_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | -20bp_to_NM_033039, uc009alf.1_5end |
EntrezGene: | 18261 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.30e-12 | 3 |
brush border epithelial cell | 1.35e-10 | 6 |
gut absorptive cell | 1.35e-10 | 6 |
enterocyte | 1.35e-10 | 6 |
columnar/cuboidal epithelial cell | 4.23e-09 | 7 |
intestinal epithelial cell | 4.25e-07 | 9 |
epithelial cell of alimentary canal | 4.25e-07 | 9 |
epithelial cell | 8.03e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.37e-30 | 31 |
mucosa | 1.93e-24 | 15 |
gastrointestinal system | 4.76e-19 | 47 |
intestinal mucosa | 1.53e-18 | 13 |
wall of intestine | 1.53e-18 | 13 |
gastrointestinal system mucosa | 1.53e-18 | 13 |
small intestine | 1.04e-16 | 4 |
organ component layer | 1.12e-14 | 24 |
ileal mucosa | 4.15e-13 | 3 |
ileum | 4.15e-13 | 3 |
mucosa of small intestine | 4.15e-13 | 3 |
wall of small intestine | 4.15e-13 | 3 |
colon | 4.18e-09 | 2 |
large intestine | 4.18e-09 | 2 |
gut-associated lymphoid tissue | 3.51e-08 | 2 |
mucosa-associated lymphoid tissue | 3.51e-08 | 2 |
lymphoid tissue | 3.51e-08 | 2 |
digestive system | 6.30e-08 | 116 |
digestive tract | 6.30e-08 | 116 |
primitive gut | 6.30e-08 | 116 |
endoderm-derived structure | 9.77e-08 | 118 |
endoderm | 9.77e-08 | 118 |
presumptive endoderm | 9.77e-08 | 118 |
epithelium of mucosa | 4.25e-07 | 9 |
gastrointestinal system epithelium | 4.25e-07 | 9 |
intestinal epithelium | 4.25e-07 | 9 |