FFCP PHASE1:Hg19::chr9:81628797..81628811,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C945 | |||
|description=CAGE_peak_at_chr9:81628797..81628811,+ | |||
|id=chr9:81628797..81628811,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.33e-20!23;CL:0000055!3.49e-10!180;CL:0000057!3.24e-09!75;CL:0000197!2.39e-07!6;CL:0000098!2.39e-07!6;CL:0002167!2.39e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.08e-35;23!CL:0000197;2.89e-23;6!CL:0000098;2.89e-23;6!CL:0002167;2.89e-23;6!CL:0000710;4.31e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.99e-35,23;CL:0000197,2.89e-23,6;CL:0000098,2.89e-23,6;CL:0002167,2.89e-23,6;CL:0000057,1.55e-11,76;CL:0000710,4.31e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.38e-08!5;DOID:450!4.38e-08!5;DOID:66!4.38e-08!5;DOID:423!4.38e-08!5;DOID:0080000!4.38e-08!5;DOID:11722!4.38e-08!5;DOID:0060084!5.46e-08!3;DOID:127!5.46e-08!3 | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.17e-12;3!DOID:127;9.17e-12;3!DOID:3112;1.06e-09;1!DOID:3571;1.91e-09;1!DOID:0060072;4.78e-09;4!DOID:17;1.13e-07;5!DOID:450;1.13e-07;5!DOID:66;1.13e-07;5!DOID:423;1.13e-07;5!DOID:0080000;1.13e-07;5!DOID:11722;1.13e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.18e-12,3;DOID:127,9.18e-12,3;DOID:3112,9.70e-10,1;DOID:3571,2.67e-09,1;DOID:0060072,4.78e-09,4;DOID:17,1.19e-07,5;DOID:450,1.19e-07,5;DOID:66,1.19e-07,5;DOID:423,1.19e-07,5;DOID:0080000,1.19e-07,5;DOID:11722,1.19e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.07e-15!40;UBERON:0002199!5.51e-13!45;UBERON:0002416!5.51e-13!45;UBERON:0003102!1.93e-10!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.72e-18;41!UBERON:0002199;6.29e-13;46!UBERON:0002416;6.29e-13;46!UBERON:0003102;5.12e-11;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.98e-23,41;UBERON:0002199,2.91e-20,46;UBERON:0002416,2.91e-20,46;UBERON:0003102,1.89e-08,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0.554128230968366,0,0,0,0.113432183160021,3.40840307808838,0.213557388818567,0,2.10063767259082,0.721367704669072,2.83404594050192,3.16398655763703,2.36286865137773,0.487185025805993,1.51460264546469,0.0920498986422993,0,7.4552014428489,6.85114267947954,4.40857540007268,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,1.73737568001095,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49565033836969,11.2410262942212,10.0929545621718,9.83987885938791,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0.18532421910392,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,1.31535265576129,0.578775534266688,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35904206073614,1.67364554099733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,1.08599920350743,1.72844298240254,0.326587360109409,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0.521988583930423,0.453411851024545,0.231522474323834,0.244736704506468,3.22359913946677,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,3.97261167496785,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78412259767164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897054900644907,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:81628797..81628811,+ | |||
}} |
Revision as of 01:50, 23 January 2014
Short description: | p@chr9:81628797..81628811, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:81628797..81628811, + |
Coexpression cluster: | C945_Olfactory_mesothelioma_Fibroblast_basal_Adipocyte_Mesenchymal_neurofibroma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.99e-35 | 23 |
receptor cell | 2.89e-23 | 6 |
sensory epithelial cell | 2.89e-23 | 6 |
olfactory epithelial cell | 2.89e-23 | 6 |
fibroblast | 1.55e-11 | 76 |
neurecto-epithelial cell | 4.31e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
skin of body | 5.98e-23 | 41 |
integument | 2.91e-20 | 46 |
integumental system | 2.91e-20 | 46 |
surface structure | 1.89e-08 | 99 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.18e-12 | 3 |
leiomyoma | 9.18e-12 | 3 |
papillary adenocarcinoma | 9.70e-10 | 1 |
liver cancer | 2.67e-09 | 1 |
benign neoplasm | 4.78e-09 | 4 |
musculoskeletal system disease | 1.19e-07 | 5 |
myotonic disease | 1.19e-07 | 5 |
muscle tissue disease | 1.19e-07 | 5 |
myopathy | 1.19e-07 | 5 |
muscular disease | 1.19e-07 | 5 |
myotonic dystrophy | 1.19e-07 | 5 |