FFCP PHASE1:Mm9::chr6:39362220..39362222,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=127|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:39362220..39362222,-|id=chr6:39362220..39362222,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,1.68e-07,3;CL:0002006,1.68e-07,3;CL:0002024,1.68e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003887,7.84e-10,10;UBERON:0002106,4.33e-09,6;UBERON:0004457,4.33e-09,6;UBERON:0000042,4.33e-09,6;UBERON:0004854,4.33e-09,6;UBERON:0009034,4.33e-09,6;UBERON:0002095,4.33e-09,6;UBERON:0004782,4.33e-09,6;UBERON:0003281,4.33e-09,6;UBERON:0009664,4.33e-09,6;UBERON:0002296,4.33e-09,6;UBERON:0005602,4.33e-09,6;UBERON:0001179,4.33e-09,6;UBERON:0006293,4.33e-09,6|phase1_expression=0,0,0.454999239389536,0.90739263392049,0,0.16787927191189,0,0.645616617207881,0.281577444303333,0.234064526321993,0,0,0.513602189793617,0.174840804837995,3.99731714178795,4.25198061518635,2.79824751251259,0.946386496074713,0.137114433605739,0,0.425216450755349,0.297872853602656,0,0.319984845586813,0.22940928106717,1.14846392823004,0,0.430942465371778,0,0.504060259519861,0,0.635030673459631,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0.588231488031014,0,0.485510353031154,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,1.68046899571232,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0.633831403506179,0,0,0,0,1.4209602298922,0,0,0.311068836925433,0.270011876663381,0.210324961351382,0.285650984403804,0.220868540951614,0,0.287536413054709,0,0,0.510749352340751,0.153606533256243,0.263772575460388,0.0914876436024097,0,0.279182999001381,0,0.916789486660861,0.589257170947335,0.427115042397309,0.372798891650601,0.302904773332736,0.151143120213571,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0,0,0.520455980298408,0.304465478312141,0.922461989024234,0.301445281105245,0.705532242814229,0.251333182659351,0.494389935468748,0.144599356919912,0.884610551949874,0.323533699894818,1.32504911076236,0.969750506270444,0,0,0.83778682725382,0.766371165625774,0.599075622529601,0,0.254140454146129,1.04853447583376,0.457500602818626,0.251308704225729,0,1.02286182932132,0.62336413367868,0.324482526135515,0,2.98576729464223,1.76905930903572,0,0,0,0.540186389416048,1.20563854268572,0.272145996605311,0.2562274405697,0.468508622798644,0.517406741478031,0.215567992932842,0,0,0.43839146485515,0.834141747676794,0.348252166522167,0.411564272815887,0.398068533636986,0,0.51469581422943,0.568326998791185,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.462801338662135,0,0.268273401399619,0.467061369468678,0.329119699826961,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,0.420579897128254,0.514523061896422,1.98251269790279,0.793351699990633,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0.570676878337677,1.89811624617805,0.164698954724011,0.502670417600539,0.198956472041151,0.38992817423824,1.79763881730844,2.16138049874694,1.59313018603494,0,0.228497025219458,0,0.610953983535943,0.775809948670503,0.49095073923223,0.0632365371242573,0,0.784993639206874,0.370191491765402,0.296452627087149,0.500535317148282,1.37591296579242,1.79889689907883,2.02860121388503,3.37648023653384,2.5462585178142,0.863088412352432,2.7562988551756,1.92192989231657,4.31304619582064,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.369506380333209,0,0,0.509235257325564,0.469380496577004,0,0.238043640886014,0.585400943573396,0.788175720530955,0.8858587585951,0.318909537314974,0.327726629431476,1.03610989119537,1.3018415272336,0,1.08781136763742,0.983528546038072,0.275936746304732,0.321101179975584,0.703270119553219,0,0.504941854408746,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0.790575555893047,0.321321316421807,0.567760340833074,0.178065603667255,0.325773918707152,0.494910368917606,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,1.05418608574999,0,0.340439605753788,0.18006109403131,0.517434735131018,0.643011105094777,0.177340233642274,0.535106452806212,0.493647061806363,0.608929898229199,0.469343416127421,0.42366414172764,0.220528398054962,0,0.645857706783622,0.0603129249281559,0.477489376012546,0.164140899745061,0.582961673259701,0.18542530201051,2.9048049735635,0.206386867963223,1.66675074632741,8.66494902221579,2.46049609897845,8.69357058184786,0.169978429993855,0.979660166265606,0.552799895217695,2.86401185404534,0,0,0.540026704109006,0.418176592028937,0,0.539457385539283,0.165306911450672,0.26175594198403,1.94422459937689,0.621339313086926,0.56369293868419,0.897099276263873,0.330916980914195,0.388902376688095,0.129159823477731,1.01373675294467,0.469428954583016,0.781226309063701,0.314578033277133,2.41584120826006,1.72818003754719,0.632022241256357,0.202725215290164,0,0.51968329191118,0,0.198681354781265,0.721172697119813,0.443068581523732,0.908698049533329,0.838274873204998,0.403304740547362,0.38983152295901,1.05833025804362,1.75315353272353,0,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0.187682475451182,0.183151624267265,0.643105137237198,0,1.12950368523413,0,0,1.71853182343688,0,0,0,0.900642406448441,0.906284817968409,0.51776031175182,0.103787347584177,0,0.341467211508268,1.21553358534147,0.209613162627982,0,0.222246727801615,0.824140228955577,0,0.252697211763798,0,0.377252682772152,0.37456602987953,0.256100609619477,0.17230640686684,0.476293691283074,0.347652977834566,1.15745532278223,1.23625770240992,0.294397840268795,0.685738504770831,1.24233064311536,0.476872379894642,0.290692833264657,0.941093804153306,0.676916863133412,0.548783918618318,0.789209134313529,0.135804113845862,0,0,0.492522411877817,0.409231043169689,1.08455788830176,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421|short_description=p@chr6:39362220..39362222,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=127 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:39362220..39362222,- | |||
|description=CAGE_peak_at_chr6:39362220..39362222,- | |||
|id=chr6:39362220..39362222,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.68e-07,3;CL:0002006,1.68e-07,3;CL:0002024,1.68e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003887,7.84e-10,10;UBERON:0002106,4.33e-09,6;UBERON:0004457,4.33e-09,6;UBERON:0000042,4.33e-09,6;UBERON:0004854,4.33e-09,6;UBERON:0009034,4.33e-09,6;UBERON:0002095,4.33e-09,6;UBERON:0004782,4.33e-09,6;UBERON:0003281,4.33e-09,6;UBERON:0009664,4.33e-09,6;UBERON:0002296,4.33e-09,6;UBERON:0005602,4.33e-09,6;UBERON:0001179,4.33e-09,6;UBERON:0006293,4.33e-09,6 | |||
|phase1_expression=0,0,0.454999239389536,0.90739263392049,0,0.16787927191189,0,0.645616617207881,0.281577444303333,0.234064526321993,0,0,0.513602189793617,0.174840804837995,3.99731714178795,4.25198061518635,2.79824751251259,0.946386496074713,0.137114433605739,0,0.425216450755349,0.297872853602656,0,0.319984845586813,0.22940928106717,1.14846392823004,0,0.430942465371778,0,0.504060259519861,0,0.635030673459631,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0.588231488031014,0,0.485510353031154,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,1.68046899571232,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0.633831403506179,0,0,0,0,1.4209602298922,0,0,0.311068836925433,0.270011876663381,0.210324961351382,0.285650984403804,0.220868540951614,0,0.287536413054709,0,0,0.510749352340751,0.153606533256243,0.263772575460388,0.0914876436024097,0,0.279182999001381,0,0.916789486660861,0.589257170947335,0.427115042397309,0.372798891650601,0.302904773332736,0.151143120213571,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0,0,0.520455980298408,0.304465478312141,0.922461989024234,0.301445281105245,0.705532242814229,0.251333182659351,0.494389935468748,0.144599356919912,0.884610551949874,0.323533699894818,1.32504911076236,0.969750506270444,0,0,0.83778682725382,0.766371165625774,0.599075622529601,0,0.254140454146129,1.04853447583376,0.457500602818626,0.251308704225729,0,1.02286182932132,0.62336413367868,0.324482526135515,0,2.98576729464223,1.76905930903572,0,0,0,0.540186389416048,1.20563854268572,0.272145996605311,0.2562274405697,0.468508622798644,0.517406741478031,0.215567992932842,0,0,0.43839146485515,0.834141747676794,0.348252166522167,0.411564272815887,0.398068533636986,0,0.51469581422943,0.568326998791185,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.462801338662135,0,0.268273401399619,0.467061369468678,0.329119699826961,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,0.420579897128254,0.514523061896422,1.98251269790279,0.793351699990633,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0.570676878337677,1.89811624617805,0.164698954724011,0.502670417600539,0.198956472041151,0.38992817423824,1.79763881730844,2.16138049874694,1.59313018603494,0,0.228497025219458,0,0.610953983535943,0.775809948670503,0.49095073923223,0.0632365371242573,0,0.784993639206874,0.370191491765402,0.296452627087149,0.500535317148282,1.37591296579242,1.79889689907883,2.02860121388503,3.37648023653384,2.5462585178142,0.863088412352432,2.7562988551756,1.92192989231657,4.31304619582064,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.369506380333209,0,0,0.509235257325564,0.469380496577004,0,0.238043640886014,0.585400943573396,0.788175720530955,0.8858587585951,0.318909537314974,0.327726629431476,1.03610989119537,1.3018415272336,0,1.08781136763742,0.983528546038072,0.275936746304732,0.321101179975584,0.703270119553219,0,0.504941854408746,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0.790575555893047,0.321321316421807,0.567760340833074,0.178065603667255,0.325773918707152,0.494910368917606,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,1.05418608574999,0,0.340439605753788,0.18006109403131,0.517434735131018,0.643011105094777,0.177340233642274,0.535106452806212,0.493647061806363,0.608929898229199,0.469343416127421,0.42366414172764,0.220528398054962,0,0.645857706783622,0.0603129249281559,0.477489376012546,0.164140899745061,0.582961673259701,0.18542530201051,2.9048049735635,0.206386867963223,1.66675074632741,8.66494902221579,2.46049609897845,8.69357058184786,0.169978429993855,0.979660166265606,0.552799895217695,2.86401185404534,0,0,0.540026704109006,0.418176592028937,0,0.539457385539283,0.165306911450672,0.26175594198403,1.94422459937689,0.621339313086926,0.56369293868419,0.897099276263873,0.330916980914195,0.388902376688095,0.129159823477731,1.01373675294467,0.469428954583016,0.781226309063701,0.314578033277133,2.41584120826006,1.72818003754719,0.632022241256357,0.202725215290164,0,0.51968329191118,0,0.198681354781265,0.721172697119813,0.443068581523732,0.908698049533329,0.838274873204998,0.403304740547362,0.38983152295901,1.05833025804362,1.75315353272353,0,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0.187682475451182,0.183151624267265,0.643105137237198,0,1.12950368523413,0,0,1.71853182343688,0,0,0,0.900642406448441,0.906284817968409,0.51776031175182,0.103787347584177,0,0.341467211508268,1.21553358534147,0.209613162627982,0,0.222246727801615,0.824140228955577,0,0.252697211763798,0,0.377252682772152,0.37456602987953,0.256100609619477,0.17230640686684,0.476293691283074,0.347652977834566,1.15745532278223,1.23625770240992,0.294397840268795,0.685738504770831,1.24233064311536,0.476872379894642,0.290692833264657,0.941093804153306,0.676916863133412,0.548783918618318,0.789209134313529,0.135804113845862,0,0,0.492522411877817,0.409231043169689,1.08455788830176,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr6:39362220..39362222,- | |||
}} |
Latest revision as of 16:29, 5 August 2015
Short description: | p@chr6:39362220..39362222, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:39362220..39362222, - |
Coexpression cluster: | MCL_coexpression_mm9:127 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.68e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.68e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.68e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intraembryonic coelom | 7.84e-10 | 10 |
spleen | 4.33e-09 | 6 |
cavity lining | 4.33e-09 | 6 |
serous membrane | 4.33e-09 | 6 |
gastrointestinal system mesentery | 4.33e-09 | 6 |
stomach region | 4.33e-09 | 6 |
mesentery | 4.33e-09 | 6 |
gastrointestinal system serosa | 4.33e-09 | 6 |
mesentery of stomach | 4.33e-09 | 6 |
gut mesentery | 4.33e-09 | 6 |
dorsal mesentery | 4.33e-09 | 6 |
dorsal mesogastrium | 4.33e-09 | 6 |
peritoneal cavity | 4.33e-09 | 6 |
spleen primordium | 4.33e-09 | 6 |