FFCP PHASE1:Mm9::chr6:52176164..52176195,-: Difference between revisions
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{{FFCP|EntrezGene=15405|HGNC=|MCL_coexpression_id=2447|UniProt=P09631|association_with_transcript=-14bp_to_ENSMUST00000114425_5end|description=CAGE_peak_1_at_Hoxa9_5end|id=chr6:52176164..52176195,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!1.04e-13!21;UBERON:0001008!6.23e-10!17;UBERON:0006554!6.87e-10!16;UBERON:0002113!8.84e-09!14;UBERON:0003918!8.84e-09!14;UBERON:0005095!8.84e-09!14;UBERON:0007687!8.84e-09!14;UBERON:0003102!1.52e-08!23;UBERON:0000026!3.61e-07!13;UBERON:0004708!3.61e-07!13;UBERON:0002101!3.61e-07!13;UBERON:0004357!3.61e-07!13;UBERON:0009872!3.61e-07!13;UBERON:0004347!3.61e-07!13;UBERON:0005732!3.61e-07!13;UBERON:0005733!3.61e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.09e-15,21;UBERON:0001008,1.06e-11,19;UBERON:0006554,1.25e-11,18;UBERON:0003102,5.31e-10,22;UBERON:0002113,5.86e-10,14;UBERON:0003918,5.86e-10,14;UBERON:0011143,5.86e-10,14;UBERON:0005095,5.86e-10,14;UBERON:0007687,5.86e-10,14;UBERON:0000026,3.63e-08,12;UBERON:0004708,3.63e-08,12;UBERON:0002101,3.63e-08,12;UBERON:0004357,3.63e-08,12;UBERON:0004347,3.63e-08,12;UBERON:0005732,3.63e-08,12;UBERON:0005733,3.63e-08,12;UBERON:0010707,4.35e-08,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0,6.03807360072595,56.0000964772993,37.8739694251456,0,0,0,0,0,0,0,0,0,0,0,1.1554064790051,0.664938581433969,0.204169356262369,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,2.2497492932035,1.97773272513395,2.1314403448383,0.599200221036809,0,0,0,0,45.4185065202048,47.7076048455485,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,47.1405736757868,34.0268317109856,71.0181888594395,0.302904773332736,0.226714680320357,0,0,0,0.539703191637817,0,0,4.35377702408431,26.9279909673331,22.3415963958467,24.7337702157238,0,12.8326477414318,7.64415719119937,7.11066703153331,0,0,0,3.88225191044804,1.8125651855302,0.148442139064825,5.72501578328248,0.913396434936424,1.38369298353635,1.20578112442098,2.3517741427141,0.879666139307728,0.494389935468748,4.62717942143717,1.76922110389975,16.0149181447935,8.61281921995535,7.75800405016355,16.775258509631,0,0,0.255457055208591,15.6957813102756,7.7987355029143,11.817531117795,0,0,0,0,0,0,0,20.9789089531652,6.09594155989456,2.27450482590307,0,0,0,0,0,0,0,0,0,46.5626864734939,45.7636714006123,25.3369618796086,25.8650964264538,21.9657326888222,13.5818344943645,13.1700567301084,18.7092210809384,1.40442637462647,4.63226232806487,5.11494298912067,0.621377317606506,0.234526059981096,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0.134206418760372,0,0,0,0.793351699990633,12.5840067815788,7.19933682767359,2.96395161040815,2.62188582010345,1.55664630691409,1.90225626112559,0,2.14108641141214,2.5133520880027,3.38226002469956,2.9244613067868,0,4.75503709724327,3.18626037206988,42.1062740115841,32.2180805559435,30.4310886317317,28.511185898344,31.8082078954906,34.0158726468045,28.1402590202945,30.9981310757165,32.1847392074818,33.5640285867297,0,1.50160595144485,1.57247196090562,0.449724224769707,0,0,0.50925170356284,0,0.648540907100142,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,1.96705709207614,1.93155722413313,0.160550589987792,0,0,12.6235463602186,0.315508219416257,0,0,0,0,0,0,0,0,0,6.24536374916382,19.9433476107326,21.501078634672,48.996126522843,0,0.485561272309963,0,0,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0,1.26042765821917,0,0,0,0,0,0,8.68285319835728,1.90648863777438,16.0985730580122,4.78170133530292,14.0474051225438,12.4847754601283,10.504766272276,9.68431308495861,1.45740418314925,27.8137953015765,1.02522528478712,0.206386867963223,0.370389054739423,0.941842285023455,1.23024804948923,0.228778173206523,33.9956859987711,37.0871348657694,34.6881934249104,0,3.00519193902079,0.203319467126849,0.108005340821801,0,0,0,0,0,11.5357326229696,0,0,1.34564891439581,1.65458490457098,3.88902376688095,1.42075805825504,2.02747350588934,3.16864544343536,3.77592716047455,0.524296722128554,0.483168241652012,2.01621004380506,0,0.810900861160657,0.513554785824136,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.100966449948148,0.304827226619999,0.302478555410522,0.292373642219257,0.384847366561318,0.233753804363138,0,0,0,0,24.1486992540238,8.07034644440082,14.4689783171139,3.64426244434412,4.01257683228291,0,0,0,0,0,0,0,0,0,0,18.8892972603202,12.369771075432,11.7806187970353,6.80698807791223,8.17491334249131,6.06683577885047,6.00066165064361,5.15087643097235,3.85103051510178,5.30664144703975,8.61829619626815,6.03604292435444,7.11675456771106,5.18603734479441,6.26046611616185,4.76293691283074,4.51948871184936,5.78727661391115,6.1812885120496,6.32955356577908,9.25746981440622,5.14679837862079,6.67621331852499,7.70336008151341,6.11710972699649,5.753793336634,5.85369513192872,5.26139422875686,5.16055632614275,7.2948495315506,5.69448086996036,5.71325997778268,6.13846564754534,6.66228417099654,4.62975866354739,0,7.48581147025307,4.72716318906256,9.94699326757986,11.4707537942148,8.57910991795559|short_description=p1@Hoxa9}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15405 | |||
|HGNC= | |||
|MCL_coexpression_id=2447 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P09631 | |||
|association_with_transcript=-14bp_to_ENSMUST00000114425_5end | |||
|cluster_id=chr6:52176164..52176195,- | |||
|description=CAGE_peak_1_at_Hoxa9_5end | |||
|id=chr6:52176164..52176195,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.04e-13!21;UBERON:0001008!6.23e-10!17;UBERON:0006554!6.87e-10!16;UBERON:0002113!8.84e-09!14;UBERON:0003918!8.84e-09!14;UBERON:0005095!8.84e-09!14;UBERON:0007687!8.84e-09!14;UBERON:0003102!1.52e-08!23;UBERON:0000026!3.61e-07!13;UBERON:0004708!3.61e-07!13;UBERON:0002101!3.61e-07!13;UBERON:0004357!3.61e-07!13;UBERON:0009872!3.61e-07!13;UBERON:0004347!3.61e-07!13;UBERON:0005732!3.61e-07!13;UBERON:0005733!3.61e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.09e-15,21;UBERON:0001008,1.06e-11,19;UBERON:0006554,1.25e-11,18;UBERON:0003102,5.31e-10,22;UBERON:0002113,5.86e-10,14;UBERON:0003918,5.86e-10,14;UBERON:0011143,5.86e-10,14;UBERON:0005095,5.86e-10,14;UBERON:0007687,5.86e-10,14;UBERON:0000026,3.63e-08,12;UBERON:0004708,3.63e-08,12;UBERON:0002101,3.63e-08,12;UBERON:0004357,3.63e-08,12;UBERON:0004347,3.63e-08,12;UBERON:0005732,3.63e-08,12;UBERON:0005733,3.63e-08,12;UBERON:0010707,4.35e-08,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0,6.03807360072595,56.0000964772993,37.8739694251456,0,0,0,0,0,0,0,0,0,0,0,1.1554064790051,0.664938581433969,0.204169356262369,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,2.2497492932035,1.97773272513395,2.1314403448383,0.599200221036809,0,0,0,0,45.4185065202048,47.7076048455485,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,47.1405736757868,34.0268317109856,71.0181888594395,0.302904773332736,0.226714680320357,0,0,0,0.539703191637817,0,0,4.35377702408431,26.9279909673331,22.3415963958467,24.7337702157238,0,12.8326477414318,7.64415719119937,7.11066703153331,0,0,0,3.88225191044804,1.8125651855302,0.148442139064825,5.72501578328248,0.913396434936424,1.38369298353635,1.20578112442098,2.3517741427141,0.879666139307728,0.494389935468748,4.62717942143717,1.76922110389975,16.0149181447935,8.61281921995535,7.75800405016355,16.775258509631,0,0,0.255457055208591,15.6957813102756,7.7987355029143,11.817531117795,0,0,0,0,0,0,0,20.9789089531652,6.09594155989456,2.27450482590307,0,0,0,0,0,0,0,0,0,46.5626864734939,45.7636714006123,25.3369618796086,25.8650964264538,21.9657326888222,13.5818344943645,13.1700567301084,18.7092210809384,1.40442637462647,4.63226232806487,5.11494298912067,0.621377317606506,0.234526059981096,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0.134206418760372,0,0,0,0.793351699990633,12.5840067815788,7.19933682767359,2.96395161040815,2.62188582010345,1.55664630691409,1.90225626112559,0,2.14108641141214,2.5133520880027,3.38226002469956,2.9244613067868,0,4.75503709724327,3.18626037206988,42.1062740115841,32.2180805559435,30.4310886317317,28.511185898344,31.8082078954906,34.0158726468045,28.1402590202945,30.9981310757165,32.1847392074818,33.5640285867297,0,1.50160595144485,1.57247196090562,0.449724224769707,0,0,0.50925170356284,0,0.648540907100142,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,1.96705709207614,1.93155722413313,0.160550589987792,0,0,12.6235463602186,0.315508219416257,0,0,0,0,0,0,0,0,0,6.24536374916382,19.9433476107326,21.501078634672,48.996126522843,0,0.485561272309963,0,0,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0,1.26042765821917,0,0,0,0,0,0,8.68285319835728,1.90648863777438,16.0985730580122,4.78170133530292,14.0474051225438,12.4847754601283,10.504766272276,9.68431308495861,1.45740418314925,27.8137953015765,1.02522528478712,0.206386867963223,0.370389054739423,0.941842285023455,1.23024804948923,0.228778173206523,33.9956859987711,37.0871348657694,34.6881934249104,0,3.00519193902079,0.203319467126849,0.108005340821801,0,0,0,0,0,11.5357326229696,0,0,1.34564891439581,1.65458490457098,3.88902376688095,1.42075805825504,2.02747350588934,3.16864544343536,3.77592716047455,0.524296722128554,0.483168241652012,2.01621004380506,0,0.810900861160657,0.513554785824136,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.100966449948148,0.304827226619999,0.302478555410522,0.292373642219257,0.384847366561318,0.233753804363138,0,0,0,0,24.1486992540238,8.07034644440082,14.4689783171139,3.64426244434412,4.01257683228291,0,0,0,0,0,0,0,0,0,0,18.8892972603202,12.369771075432,11.7806187970353,6.80698807791223,8.17491334249131,6.06683577885047,6.00066165064361,5.15087643097235,3.85103051510178,5.30664144703975,8.61829619626815,6.03604292435444,7.11675456771106,5.18603734479441,6.26046611616185,4.76293691283074,4.51948871184936,5.78727661391115,6.1812885120496,6.32955356577908,9.25746981440622,5.14679837862079,6.67621331852499,7.70336008151341,6.11710972699649,5.753793336634,5.85369513192872,5.26139422875686,5.16055632614275,7.2948495315506,5.69448086996036,5.71325997778268,6.13846564754534,6.66228417099654,4.62975866354739,0,7.48581147025307,4.72716318906256,9.94699326757986,11.4707537942148,8.57910991795559 | |||
|short_description=p1@Hoxa9 | |||
}} |
Revision as of 22:37, 5 August 2015
Short description: | p1@Hoxa9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hoxa9_5end |
Coexpression cluster: | MCL_coexpression_mm9:2447 |
Association with transcript: | -14bp_to_ENSMUST00000114425_5end |
EntrezGene: | 15405 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 1.09e-15 | 21 |
renal system | 1.06e-11 | 19 |
urinary system structure | 1.25e-11 | 18 |
surface structure | 5.31e-10 | 22 |
kidney | 5.86e-10 | 14 |
kidney mesenchyme | 5.86e-10 | 14 |
upper urinary tract | 5.86e-10 | 14 |
kidney rudiment | 5.86e-10 | 14 |
kidney field | 5.86e-10 | 14 |
appendage | 3.63e-08 | 12 |
paired limb/fin | 3.63e-08 | 12 |
limb | 3.63e-08 | 12 |
paired limb/fin bud | 3.63e-08 | 12 |
limb bud | 3.63e-08 | 12 |
limb/fin field | 3.63e-08 | 12 |
limb field | 3.63e-08 | 12 |
appendage girdle complex | 4.35e-08 | 13 |