FFCP PHASE1:Hg19::chrX:80370321..80370336,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1098 | |||
|description=CAGE_peak_at_chrX:80370321..80370336,- | |||
|id=chrX:80370321..80370336,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!3.76e-15!51;DOID:0060083!3.76e-15!51;DOID:162!7.04e-13!235;DOID:14566!1.19e-12!239;DOID:1240!5.22e-12!39;DOID:8692!1.49e-08!31;DOID:0050686!3.04e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.06e-13;39!DOID:2531;1.67e-12;51!DOID:0060083;1.67e-12;51!DOID:8692;1.37e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.39e-19,51;DOID:0060083,1.39e-19,51;DOID:1240,1.06e-15,39;DOID:162,1.49e-09,235;DOID:14566,4.40e-09,239;DOID:8692,1.98e-08,31;DOID:0050686,6.65e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.35e-13!57;UBERON:0005068!8.35e-13!57;UBERON:0006241!8.35e-13!57;UBERON:0007135!8.35e-13!57;UBERON:0002346!3.45e-12!90;UBERON:0002780!5.06e-11!41;UBERON:0001890!5.06e-11!41;UBERON:0006240!5.06e-11!41;UBERON:0001017!7.23e-11!82;UBERON:0003075!1.01e-10!86;UBERON:0007284!1.01e-10!86;UBERON:0005743!1.79e-10!86;UBERON:0003080!1.83e-10!42;UBERON:0000073!2.62e-10!94;UBERON:0001016!2.62e-10!94;UBERON:0007023!5.69e-10!115;UBERON:0002616!1.14e-09!59;UBERON:0000955!1.95e-09!69;UBERON:0006238!1.95e-09!69;UBERON:0002020!2.58e-09!34;UBERON:0003528!2.58e-09!34;UBERON:0002791!2.25e-08!33;UBERON:0000924!5.36e-08!173;UBERON:0006601!5.36e-08!173;UBERON:0001893!7.36e-08!34;UBERON:0003056!1.23e-07!61;UBERON:0001869!3.81e-07!32;UBERON:0004121!5.28e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;3.57e-09;32!UBERON:0003528;4.26e-09;34!UBERON:0002020;4.26e-09;34!UBERON:0002780;8.63e-09;41!UBERON:0001890;8.63e-09;41!UBERON:0001869;4.22e-08;32!UBERON:0002619;7.75e-08;22!UBERON:0000073;8.77e-08;53!UBERON:0002616;8.77e-08;53!UBERON:0001893;1.38e-07;34!UBERON:0002420;4.67e-07;9!UBERON:0000125;4.67e-07;9!UBERON:0007245;4.67e-07;9!UBERON:0002308;4.67e-07;9!UBERON:0010009;4.67e-07;9!UBERON:0010011;4.67e-07;9!UBERON:0000454;4.67e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.63e-15,56;UBERON:0005068,1.63e-15,56;UBERON:0006241,1.63e-15,56;UBERON:0007135,1.63e-15,56;UBERON:0000073,1.61e-12,53;UBERON:0002616,1.61e-12,53;UBERON:0003528,9.19e-12,34;UBERON:0002020,9.19e-12,34;UBERON:0002780,1.31e-11,41;UBERON:0001890,1.31e-11,41;UBERON:0003080,1.31e-11,41;UBERON:0006240,1.31e-11,41;UBERON:0002346,2.30e-11,86;UBERON:0001017,3.22e-11,81;UBERON:0001016,2.46e-10,89;UBERON:0002791,1.33e-09,32;UBERON:0003075,2.40e-09,82;UBERON:0007284,2.40e-09,82;UBERON:0000955,3.35e-09,68;UBERON:0006238,3.35e-09,68;UBERON:0001893,7.71e-09,34;UBERON:0001869,3.29e-08,32;UBERON:0002619,5.31e-08,22;UBERON:0010371,2.09e-07,104;UBERON:0000125,2.91e-07,9;UBERON:0002308,2.91e-07,9;UBERON:0002420,3.44e-07,9;UBERON:0007245,3.44e-07,9;UBERON:0010009,3.44e-07,9;UBERON:0010011,3.44e-07,9;UBERON:0000454,3.44e-07,9;UBERON:0003056,3.59e-07,61;UBERON:0000956,8.56e-07,25;UBERON:0000203,8.56e-07,25 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.410623275218653,0.502170558379211,4.20273731613732,3.7766271146975,4.09296062831132,0,0,0,0,0,0,2.01414721508784,0.284338464974843,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0.579386075843295,0,0.486634870302636,0.756278537312543,0.443458794925128,0.614843499851882,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.450445921933289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0.245668634623536,0,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0.226864366320042,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,1.32529768321485,0.813357600086629,0.621966330092223,0.756962552626885,1.09493207722749,0,0,0,0,0,1.77460200059766,0.674338760312407,0.723033089650446,1.65440959098591,1.96091499683166,0.474541238222193,1.07865046528132,1.17732879075208,0.769494313892781,0,0,0,0,0,0,3.54473944008842,0.441463099414651,0,0.171567810298526,0.109750285408626,0,0.603173834469785,0.0925884451585296,0,0,1.44331342025273,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.268675568108545,0.290633938513962,0,0,0.264145302039678,0,0.144119953416961,0.25248486685276,0.126995788584338,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,1.09970290300263,0,1.50677127429638,6.32501818449095,0,0,0,0,0,0,0,0.394061520403854,0,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.362578348774867,0.200506470303285,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0.231046011313244,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0.512900250232778,0,0,0.309123034943167,3.11336180382368,0.660075999364704,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.424216295861138,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,1.05553817648832,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.640944426764839,0,0.980160863924127,2.41544127663434,1.15415370381156,1.28055318027145,2.8696729091188,0,0,1.05836791361941,2.27235358192189,2.24637742490767,1.36940807419915,9.71415353792744,0,0.50787533340481,0,0.605399121573143,0,1.03051603426729,0.921722292925374,0.447352215784832,0.834245708559542,0,2.22724939116194,1.23087398947712,1.6227340708559,0.66614393599564,1.4098700508785,0,0,1.33496573924465,2.78608460693696,0,0,0,0,1.9882952955326,1.40669416410513,0,0.16480387422676,0.422250816255987,0.996239941255349,0,1.51159648712566,0.306806047506464,0.369254416383208,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.74214478529481,0,0,0.437299999980979,0,1.0241410345695,1.77977555204936,2.12748913591143,1.03423011972439,3.79085997398231,0,0,1.08536794762867,0,0.552896299656123,0.295547618953547,0.219385397153973,0.32681539055697,0.139423744278603,0.384751292518985,0.113942055847001,0.23056390438806,0.0897576444097721,0,0,0,0,3.06579894587209,1.56980256395025,1.32969345520125,0.902382642468723,0.392125068635479,0.503464760927528,1.3282761290693,0.953619473882272,0.843992258112108,0,0,1.73110911793673,0.995261931078505,0.353830258013357,0.611030144933625,0.593042257361244,0.494255755786011,0.835375596043643,0.269604531922708,0,0.702793337176017,1.64209310294099,0,0,0.394584402849391,2.41981432097328,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0.277349346026277,0.173559738335131,0,0,1.92199335066233,0.859930162358083,5.61186721476694,5.70096673272247,5.09115833729897,0.290967049465258,0.0882561266915003,0.225980740780532,0.137041924646751,0,0.569797163602908,0.977756913674015,0.160317640503067,0,0,0.288180834308212,0,0.514784993585894,0.14405479798815,0,0.471388069233591,0.271808412147228,0.104602846312333,0.101998217636322,0,0.600420288709789,2.0535806833799,0,0.429765441419957,1.05154941711726,0.279282401272254,0.458320848023367,0,0,0,0,0,0,0,0.157566364614447,0,0,0,5.33441992014442,2.38568906942791,1.77064427945048,0.482259445395058,1.10031549277787,2.07720169014593,0,0,0,0.335434687599266,0.394028536495991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| |||
|short_description=p@chrX:80370321..80370336,- | |||
}} |
Revision as of 06:12, 23 January 2014
Short description: | p@chrX:80370321..80370336, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chrX:80370321..80370336, - |
Coexpression cluster: | C1098_acute_teratocarcinoma_myelodysplastic_colon_adult_Mast_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.63e-15 | 56 |
neural rod | 1.63e-15 | 56 |
future spinal cord | 1.63e-15 | 56 |
neural keel | 1.63e-15 | 56 |
regional part of nervous system | 1.61e-12 | 53 |
regional part of brain | 1.61e-12 | 53 |
brain grey matter | 9.19e-12 | 34 |
gray matter | 9.19e-12 | 34 |
regional part of forebrain | 1.31e-11 | 41 |
forebrain | 1.31e-11 | 41 |
anterior neural tube | 1.31e-11 | 41 |
future forebrain | 1.31e-11 | 41 |
neurectoderm | 2.30e-11 | 86 |
central nervous system | 3.22e-11 | 81 |
nervous system | 2.46e-10 | 89 |
regional part of telencephalon | 1.33e-09 | 32 |
neural plate | 2.40e-09 | 82 |
presumptive neural plate | 2.40e-09 | 82 |
brain | 3.35e-09 | 68 |
future brain | 3.35e-09 | 68 |
telencephalon | 7.71e-09 | 34 |
cerebral hemisphere | 3.29e-08 | 32 |
regional part of cerebral cortex | 5.31e-08 | 22 |
ecto-epithelium | 2.09e-07 | 104 |
neural nucleus | 2.91e-07 | 9 |
nucleus of brain | 2.91e-07 | 9 |
basal ganglion | 3.44e-07 | 9 |
nuclear complex of neuraxis | 3.44e-07 | 9 |
aggregate regional part of brain | 3.44e-07 | 9 |
collection of basal ganglia | 3.44e-07 | 9 |
cerebral subcortex | 3.44e-07 | 9 |
pre-chordal neural plate | 3.59e-07 | 61 |
cerebral cortex | 8.56e-07 | 25 |
pallium | 8.56e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.39e-19 | 51 |
immune system cancer | 1.39e-19 | 51 |
leukemia | 1.06e-15 | 39 |
cancer | 1.49e-09 | 235 |
disease of cellular proliferation | 4.40e-09 | 239 |
myeloid leukemia | 1.98e-08 | 31 |
organ system cancer | 6.65e-08 | 137 |