FFCP PHASE1:Hg19::chrX:80377118..80377149,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79366 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8013 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JSK6 | |||
|association_with_transcript=0bp_to_ENST00000373250_5end | |||
|coexpression_cluster_id=C1098 | |||
|description=CAGE_peak_1_at_HMGN5_5end | |||
|id=chrX:80377118..80377149,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.97e-07;29 | |||
|ontology_enrichment_disease=DOID:2531!2.74e-15!51;DOID:0060083!2.74e-15!51;DOID:1240!7.52e-14!39;DOID:14566!2.59e-13!239;DOID:162!4.34e-13!235;DOID:8692!2.56e-11!31;DOID:0050686!1.14e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.85e-12;39!DOID:8692;1.06e-11;31!DOID:2531;1.10e-10;51!DOID:0060083;1.10e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.17e-16,51;DOID:0060083,1.17e-16,51;DOID:162,6.64e-15,235;DOID:14566,9.98e-15,239;DOID:1240,1.19e-14,39;DOID:8692,1.50e-11,31;DOID:0050686,9.91e-11,137 | |||
|ontology_enrichment_uberon=UBERON:0002346!1.03e-07!90;UBERON:0005743!2.88e-07!86;UBERON:0001017!3.98e-07!82;UBERON:0000073!4.05e-07!94;UBERON:0001016!4.05e-07!94;UBERON:0003080!4.49e-07!42;UBERON:0001049!4.81e-07!57;UBERON:0005068!4.81e-07!57;UBERON:0006241!4.81e-07!57;UBERON:0007135!4.81e-07!57;UBERON:0002780!7.32e-07!41;UBERON:0001890!7.32e-07!41;UBERON:0006240!7.32e-07!41;UBERON:0003075!9.06e-07!86;UBERON:0007284!9.06e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.66e-07;9!UBERON:0001557;2.66e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.79e-07,223;UBERON:0001737,2.79e-07,9;UBERON:0001016,3.85e-07,89;UBERON:0001017,3.91e-07,81;UBERON:0002346,4.83e-07,86;UBERON:0001049,6.84e-07,56;UBERON:0005068,6.84e-07,56;UBERON:0006241,6.84e-07,56;UBERON:0007135,6.84e-07,56;UBERON:0002780,7.10e-07,41;UBERON:0001890,7.10e-07,41;UBERON:0003080,7.10e-07,41;UBERON:0006240,7.10e-07,41 | |||
|phase1_expression=0.363356758541113,4.92431204949261,2.67813367782345,3.00219895059391,2.68176656656373,0.872338524100369,2.53299878168311,0,0.783556884599516,0.491467873003018,0,0,0.263766978228454,1.36142988256051,0.662794751455832,0,0.602694528023977,0,0,1.47745269692145,0.204000691244253,0,6.29719171688325,3.28498620174922,2.00868223351684,42.4858535958609,40.1471882410235,48.092287382658,0.393364276848904,0.767658796194425,0.464448369948228,3.67768489791571,0.30120591877825,1.47901604066715,32.613691444307,3.12772311472327,12.3312184520636,0.553995408531877,0.401088894940283,0.217010870715852,2.46307021663917,1.29557466407592,3.09090681161024,0.436194716338694,0,0,0.929716147622738,0,0,0.28769239232215,0.768482119587302,0,0.689491361473237,1.29096936716765,2.70852973188684,0.376484679085209,0.545812300115692,0.449446968890169,0.612167784741805,0.320929027076094,0,0.659702600373432,0.598390972864896,0,0.290209238628584,0.56738522469114,0,0.251248665256743,1.0429658368404,0.217188844705117,1.81619850790011,0,0.316462387440884,0,0.425208599930087,0,0.112328631146495,0,0.32145117339416,0,0.19891667719909,0,0,1.09227722252426,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0.382273228125229,5.28685314316103,1.68152568894461,14.2227405778542,0.983548850569165,1.57204305099666,0.822405995998037,0.167186495390678,0,0.473447805734733,0,0.779873198196215,0,0,0.270803863765016,0.128091319725675,0,1.15106533222573,0.552700035571697,1.44901542867526,1.18629250529648,0.802622484269139,0,1.24640276967323,0.766440987203842,0.68725489096526,0.506039384039006,0,0,0,0.150575119077773,0.383959833463255,1.24930726552346,0.947109008176067,0,0.604820229674197,1.87208137048455,1.15859523106239,0,0,0.383587685530591,1.0843174571537,0,0.289693037921647,0,0,9.64255135073492,5.09977614163897,4.0404001418838,10.2163678888216,0.364295288292542,0,0.324547393654683,0.174129737299267,0.664789802594326,0.238490624305342,0,0,0.993812036833525,0,0,0.56530794192401,0.419499436209906,2.20094433552054,1.25396979922086,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,2.20597848207521,2.43042584364528,8.75137337183982,6.06229306090659,6.98191178996598,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,0.496971951695318,0.633152558322899,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.98667019366864,0.622422070799533,0.134710672069688,0.653847612453835,0.454072282934794,1.15235184896,0.234321431833797,0,0,1.04614076386261,1.52664848236894,2.75184005425824,2.52811452064047,1.83738754129404,2.33385202892359,1.96318984233954,0,0,0,0,4.88174730466792,3.1279629967991,2.77064115484183,0.877955241761676,0.30648779579902,0,1.58805056424029,0.179389635688862,0,0,0.300091096084402,0.412210116953756,0.257640540045629,0.18611685633159,0.337552664482532,0,0,0.0920498986422993,0,0,0.302256294682921,0.339121184620975,0.773043412653187,0,1.14721838155602,3.65921118388786,4.37348235460901,3.83440011469411,1.65857688024593,3.02785021050754,2.91981887260664,0,0.643240938192885,0,0,0,20.1121560067735,27.1421351025744,26.0291912274161,22.7205583828732,21.5700649651482,22.7779794346653,24.1348041606694,23.3503543499162,28.4712896140329,0,0,0.4115740113314,0,6.33775174109154,7.86261773342101,8.86184860022106,22.9560811695618,1.22988438543114,7.20584803253807,2.52425656439839,0,1.70899253099772,1.20364978706088,0,0,5.77325368101093,3.59384255422738,1.87853910777315,0.577465791044295,0,1.52203321787679,0,0,2.95460407304877,1.17002132569619,1.78357394746474,0.93733833986777,2.51973192298289,1.41775097242386,3.49278238541108,2.61570544662566,0,75.8701386359753,3.78608266256872,1.24396869324463,2.01767934783746,1.38866676769018,3.36538839748496,0,0,0,2.15937734676979,3.90445975197093,3.42991719156694,1.79409734952577,1.74384027533312,4.47363543507795,0.775630294546667,0,0.845302752556,0.797814349754612,0,0.257207374262142,1.41849132023278,0,0.285955987316295,0,1.64648067356154,0.65147236858747,0.355391948742546,0.791951872933429,4.52159065589379,6.10073421020206,3.09916272664377,0,2.00902836572851,2.10833939483032,0,0,5.70547620162874,1.15825045334063,1.02738161275192,4.1184021545176,0,0.985153801009636,0.646882724578552,0.898401253958239,8.89331184778622,9.10978977003352,3.09315525111078,3.35032530668698,5.10351001322531,0,0,0.414415513436035,0.24538298343828,0.500170521059677,0.542530047399471,0.207970861530807,0.892144943985809,0.157702415033935,0.117141414992713,0,0,0,1.32845119707087,0,0.955719759148911,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0.303127571446259,0,0,0,0.153461973288062,0,0.384417447767103,0,0.321707842287215,0,0.771048469013278,1.42049380250502,1.64254312027618,1.03850885836724,0.581051892299796,0.846016147141356,0.40101294060657,0.368323955743585,0.229628896329213,0,0.131124414959424,0.451199612907412,2.84956747286335,0.784349769176855,0,4.43316841350078,0,0,2.37507507712353,0,1.08378575017541,0.501689773854853,1.52925763827023,0.831076008928724,1.11937377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| |||
|short_description=p1@HMGN5 | |||
}} |
Revision as of 06:12, 23 January 2014
Short description: | p1@HMGN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HMGN5_5end |
Coexpression cluster: | C1098_acute_teratocarcinoma_myelodysplastic_colon_adult_Mast_merkel |
Association with transcript: | 0bp_to_ENST00000373250_5end |
EntrezGene: | HMGN5 |
HGNC: | 8013 |
UniProt: | Q5JSK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.79e-07 | 223 |
larynx | 2.79e-07 | 9 |
nervous system | 3.85e-07 | 89 |
central nervous system | 3.91e-07 | 81 |
neurectoderm | 4.83e-07 | 86 |
neural tube | 6.84e-07 | 56 |
neural rod | 6.84e-07 | 56 |
future spinal cord | 6.84e-07 | 56 |
neural keel | 6.84e-07 | 56 |
regional part of forebrain | 7.10e-07 | 41 |
forebrain | 7.10e-07 | 41 |
anterior neural tube | 7.10e-07 | 41 |
future forebrain | 7.10e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.17e-16 | 51 |
immune system cancer | 1.17e-16 | 51 |
cancer | 6.64e-15 | 235 |
disease of cellular proliferation | 9.98e-15 | 239 |
leukemia | 1.19e-14 | 39 |
myeloid leukemia | 1.50e-11 | 31 |
organ system cancer | 9.91e-11 | 137 |