FFCP PHASE1:Mm9::chr7:31844661..31844676,+: Difference between revisions
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{{FFCP|EntrezGene=243914|HGNC=|MCL_coexpression_id=107|UniProt=Q4KMN2|association_with_transcript=-118bp_to_ENSMUST00000088438_5end|description=CAGE_peak_8_at_Lgi4_5end|id=chr7:31844661..31844676,+|ontology_enrichment_celltype=CL:0000107!6.16e-11!9|ontology_enrichment_celltype_v019_2=CL:0000107,4.68e-48,9;CL:0000221,7.75e-18,44;CL:0000133,7.75e-18,44;CL:0002319,4.42e-15,43;CL:0000217,7.66e-15,2;CL:0000328,7.66e-15,2;CL:0002573,7.66e-15,2;CL:0002376,7.66e-15,2;CL:0000218,7.66e-15,2;CL:0000692,7.66e-15,2;CL:0002377,7.66e-15,2;CL:0002375,7.66e-15,2;CL:0000540,1.09e-12,33;CL:0000047,1.09e-12,33;CL:0000031,1.09e-12,33;CL:0000404,1.09e-12,33;CL:0002321,8.28e-11,70;CL:0000393,1.25e-10,39;CL:0000211,1.25e-10,39;CL:0000215,3.30e-10,3;CL:0000710,6.57e-08,1;CL:0002077,6.57e-08,1;CL:0005014,6.57e-08,1;CL:0002315,6.57e-08,1;CL:0002490,6.57e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!4.47e-13!11;UBERON:0002410!6.16e-11!9;UBERON:0004121!5.26e-07!102;UBERON:0000924!5.26e-07!102;UBERON:0006601!5.26e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.30e-61,11;UBERON:0002410,4.68e-48,9;UBERON:0000011,8.04e-22,3;UBERON:0000013,8.52e-21,3;UBERON:0010313,4.52e-10,3;UBERON:0002342,4.52e-10,3;UBERON:0002005,4.52e-10,3;UBERON:0005428,4.52e-10,3;UBERON:0005062,4.52e-10,3;UBERON:0001016,5.57e-10,75;UBERON:0004121,3.29e-09,95;UBERON:0000924,3.29e-09,95;UBERON:0006601,3.29e-09,95|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,0,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0.589257170947335,0.427115042397309,0.186399445825301,2.65041676666144,9.82430281388212,0,0,0,0,0,0,0.702222100658759,0,0,0,2.11265129665021,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0.502666365318702,0,0.578397427679647,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.878342391034642,0.41889341362691,0.255457055208591,0,0,0,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.124406970610093,0,0.420883711772948,0,0,0.540186389416048,0.150704817835715,0,0.2562274405697,0.374806898238915,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.324275238183423,0.292399974850665,0.439100230582101,0.134206418760372,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0.757412781613119,0.94652465824877,3.51394869866975,5.38558494331997,6.69112634267146,8.68914828921337,8.49229592366497,4.85772842009873,4.67609372658099,1.97643888973262,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0.65954501176592,0.484393280087717,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0,0.785267825952089,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0.36630324853453,0.428736758158132,0,0,0,0,0.343706364687375,1.37016503954128,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0.476872379894642,0,0.282328141245992,0,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p8@Lgi4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:243914 | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q4KMN2 | |||
|association_with_transcript=-118bp_to_ENSMUST00000088438_5end | |||
|cluster_id=chr7:31844661..31844676,+ | |||
|description=CAGE_peak_8_at_Lgi4_5end | |||
|id=chr7:31844661..31844676,+ | |||
|ontology_enrichment_celltype=CL:0000107!6.16e-11!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.68e-48,9;CL:0000221,7.75e-18,44;CL:0000133,7.75e-18,44;CL:0002319,4.42e-15,43;CL:0000217,7.66e-15,2;CL:0000328,7.66e-15,2;CL:0002573,7.66e-15,2;CL:0002376,7.66e-15,2;CL:0000218,7.66e-15,2;CL:0000692,7.66e-15,2;CL:0002377,7.66e-15,2;CL:0002375,7.66e-15,2;CL:0000540,1.09e-12,33;CL:0000047,1.09e-12,33;CL:0000031,1.09e-12,33;CL:0000404,1.09e-12,33;CL:0002321,8.28e-11,70;CL:0000393,1.25e-10,39;CL:0000211,1.25e-10,39;CL:0000215,3.30e-10,3;CL:0000710,6.57e-08,1;CL:0002077,6.57e-08,1;CL:0005014,6.57e-08,1;CL:0002315,6.57e-08,1;CL:0002490,6.57e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!4.47e-13!11;UBERON:0002410!6.16e-11!9;UBERON:0004121!5.26e-07!102;UBERON:0000924!5.26e-07!102;UBERON:0006601!5.26e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.30e-61,11;UBERON:0002410,4.68e-48,9;UBERON:0000011,8.04e-22,3;UBERON:0000013,8.52e-21,3;UBERON:0010313,4.52e-10,3;UBERON:0002342,4.52e-10,3;UBERON:0002005,4.52e-10,3;UBERON:0005428,4.52e-10,3;UBERON:0005062,4.52e-10,3;UBERON:0001016,5.57e-10,75;UBERON:0004121,3.29e-09,95;UBERON:0000924,3.29e-09,95;UBERON:0006601,3.29e-09,95 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,0,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0.589257170947335,0.427115042397309,0.186399445825301,2.65041676666144,9.82430281388212,0,0,0,0,0,0,0.702222100658759,0,0,0,2.11265129665021,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0.502666365318702,0,0.578397427679647,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.878342391034642,0.41889341362691,0.255457055208591,0,0,0,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.124406970610093,0,0.420883711772948,0,0,0.540186389416048,0.150704817835715,0,0.2562274405697,0.374806898238915,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.324275238183423,0.292399974850665,0.439100230582101,0.134206418760372,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0.757412781613119,0.94652465824877,3.51394869866975,5.38558494331997,6.69112634267146,8.68914828921337,8.49229592366497,4.85772842009873,4.67609372658099,1.97643888973262,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0.65954501176592,0.484393280087717,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0,0.785267825952089,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0.36630324853453,0.428736758158132,0,0,0,0,0.343706364687375,1.37016503954128,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0.476872379894642,0,0.282328141245992,0,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p8@Lgi4 | |||
}} |
Revision as of 02:04, 5 August 2015
Short description: | p8@Lgi4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Lgi4_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | -118bp_to_ENSMUST00000088438_5end |
EntrezGene: | 243914 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.68e-48 | 9 |
ectodermal cell | 7.75e-18 | 44 |
neurectodermal cell | 7.75e-18 | 44 |
neural cell | 4.42e-15 | 43 |
insulating cell | 7.66e-15 | 2 |
myelin accumulating cell | 7.66e-15 | 2 |
Schwann cell | 7.66e-15 | 2 |
non-myelinating Schwann cell | 7.66e-15 | 2 |
myelinating Schwann cell;;Schwann cell | 7.66e-15 | 2 |
terminal Schwann cell | 7.66e-15 | 2 |
immature Schwann cell | 7.66e-15 | 2 |
Schwann cell precursor | 7.66e-15 | 2 |
neuron | 1.09e-12 | 33 |
neuronal stem cell | 1.09e-12 | 33 |
neuroblast | 1.09e-12 | 33 |
electrically signaling cell | 1.09e-12 | 33 |
embryonic cell | 8.28e-11 | 70 |
electrically responsive cell | 1.25e-10 | 39 |
electrically active cell | 1.25e-10 | 39 |
barrier cell | 3.30e-10 | 3 |
neurecto-epithelial cell | 6.57e-08 | 1 |
ecto-epithelial cell | 6.57e-08 | 1 |
auditory epithelial support cell | 6.57e-08 | 1 |
supporting cell of cochlea | 6.57e-08 | 1 |
organ of Corti supporting cell | 6.57e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.30e-61 | 11 |
autonomic nervous system | 4.68e-48 | 9 |
parasympathetic nervous system | 8.04e-22 | 3 |
sympathetic nervous system | 8.52e-21 | 3 |
neural crest-derived structure | 4.52e-10 | 3 |
neural crest | 4.52e-10 | 3 |
enteric nervous system | 4.52e-10 | 3 |
vagal neural crest | 4.52e-10 | 3 |
neural fold | 4.52e-10 | 3 |
nervous system | 5.57e-10 | 75 |
ectoderm-derived structure | 3.29e-09 | 95 |
ectoderm | 3.29e-09 | 95 |
presumptive ectoderm | 3.29e-09 | 95 |