FFCP PHASE1:Mm9::chr8:12915879..12915966,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=17207|HGNC=|MCL_coexpression_id=13|UniProt=E9Q3S7,E9PXE2,Q6PDM6,Q8C474|association_with_transcript=0bp_to_ENSMUST00000064464,ENSMUST00000110876,ENSMUST00000156405,NM_178076,uc009kwl.2_5end|description=CAGE_peak_1_at_Mcf2l_5end|id=chr8:12915879..12915966,+|ontology_enrichment_celltype=CL:0000540!9.82e-16!33;CL:0000047!9.82e-16!33;CL:0000031!9.82e-16!33;CL:0000404!9.82e-16!33;CL:0000117!2.03e-15!23;CL:0000337!2.03e-15!23;CL:0000393!1.97e-10!39;CL:0000211!1.97e-10!39;CL:0000221!1.92e-09!44;CL:0000133!1.92e-09!44;CL:0002319!3.14e-09!43|ontology_enrichment_celltype_v019_2=CL:0000540,6.73e-18,33;CL:0000047,6.73e-18,33;CL:0000031,6.73e-18,33;CL:0000404,6.73e-18,33;CL:0000117,1.55e-17,23;CL:0000337,1.55e-17,23;CL:0000393,6.95e-13,39;CL:0000211,6.95e-13,39;CL:0000221,3.48e-11,44;CL:0000133,3.48e-11,44;CL:0002319,6.12e-11,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.30e-27!73;UBERON:0005743!5.30e-27!73;UBERON:0002346!2.93e-26!71;UBERON:0003075!2.93e-26!71;UBERON:0007284!2.93e-26!71;UBERON:0000073!8.63e-26!75;UBERON:0001016!8.63e-26!75;UBERON:0001049!3.15e-24!52;UBERON:0005068!3.15e-24!52;UBERON:0006241!3.15e-24!52;UBERON:0007135!3.15e-24!52;UBERON:0004121!1.16e-23!102;UBERON:0000924!1.16e-23!102;UBERON:0006601!1.16e-23!102;UBERON:0000033!1.10e-22!63;UBERON:0000955!3.52e-22!50;UBERON:0006238!3.52e-22!50;UBERON:0002616!1.21e-21!49;UBERON:0003056!1.50e-21!49;UBERON:0003080!7.01e-20!40;UBERON:0002780!2.66e-19!39;UBERON:0001890!2.66e-19!39;UBERON:0006240!2.66e-19!39;UBERON:0002020!5.91e-19!34;UBERON:0002791!2.32e-15!29;UBERON:0003528!2.32e-15!29;UBERON:0001893!2.32e-15!29;UBERON:0007811!3.16e-11!86;UBERON:0000153!1.33e-10!94;UBERON:0000956!2.20e-10!21;UBERON:0001869!2.20e-10!21;UBERON:0000203!2.20e-10!21;UBERON:0002619!3.63e-08!17;UBERON:0002021!1.71e-07!10;UBERON:0000411!1.71e-07!10;UBERON:0001950!1.71e-07!10;UBERON:0000468!2.54e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.21e-32,73;UBERON:0001016,2.97e-30,75;UBERON:0002346,8.05e-30,64;UBERON:0003075,8.05e-30,64;UBERON:0007284,8.05e-30,64;UBERON:0000073,2.01e-29,54;UBERON:0001049,4.68e-28,52;UBERON:0005068,4.68e-28,52;UBERON:0006241,4.68e-28,52;UBERON:0007135,4.68e-28,52;UBERON:0004121,7.76e-26,95;UBERON:0000924,7.76e-26,95;UBERON:0006601,7.76e-26,95;UBERON:0010371,9.23e-25,73;UBERON:0003056,1.78e-24,49;UBERON:0000955,7.75e-24,47;UBERON:0006238,7.75e-24,47;UBERON:0002616,3.15e-23,46;UBERON:0003080,3.43e-23,40;UBERON:0002780,1.61e-22,39;UBERON:0001890,1.61e-22,39;UBERON:0006240,1.61e-22,39;UBERON:0002020,3.80e-22,34;UBERON:0003528,5.59e-18,29;UBERON:0002791,5.59e-18,29;UBERON:0001893,5.59e-18,29;UBERON:0010314,9.77e-18,92;UBERON:0000956,3.30e-12,21;UBERON:0001869,3.30e-12,21;UBERON:0000203,3.30e-12,21;UBERON:0002619,1.23e-09,17;UBERON:0002021,2.11e-08,10;UBERON:0000411,2.11e-08,10;UBERON:0001950,2.11e-08,10;UBERON:0002420,4.55e-07,8;UBERON:0007245,4.55e-07,8;UBERON:0010009,4.55e-07,8;UBERON:0010011,4.55e-07,8;UBERON:0000454,4.55e-07,8|phase1_expression=5.76535849577258,0,0,0,0,0.671517087647559,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0.22940928106717,0,0,0.215471232685889,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,49.1628999888823,56.6020347821075,32.3254015788151,0,0,0,0,0,0,1.15265491596466,22.8117147078651,30.2413301862987,26.5009451302741,48.2750163642428,57.6466891883711,30.5002090045236,34.6002150375833,31.2534387447407,14.3150645299205,16.5993539510744,12.595735727012,57.8980803135551,66.2370539681446,51.0495103145625,18.4260779340911,15.757353080887,19.7109739632085,51.5600024578918,48.1216281100968,48.4638559145781,0,0.377857800533928,0.579728977403356,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,5.35204995151386,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,4.16364784238726,3.34912026143355,3.22861696158482,3.46662073271032,3.52766121407114,0.125666591329675,0,0,0,0,0,0,0,6.73395833126558,12.1479089951804,0,0,0,0,20.6711082378655,25.6200337578431,69.9894741268655,24.8568777874955,35.0330176542553,14.7529511637288,24.6606719862992,0.712875546952214,0.124406970610093,0,0.631325567659422,1.95180664444056,2.75882525320168,4.68161537493908,8.89158425230719,7.34794190834341,8.71173297936978,10.4008914261299,8.01980449290949,0.215567992932842,2.64748512234947,1.75951124163949,2.19195732427575,2.78047249225598,0.348252166522167,0,2.18937693500343,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0,0,0,0,19.767255165028,59.2730567304678,0,0.264450566663544,2.13288250535234,3.48355007790658,2.96395161040815,2.01683524623343,2.00140239460383,1.71203063501303,0.474529061544512,2.14108641141214,1.25667604400135,0.994782360205754,1.36474860983384,0,0.216138049874694,0,2.27601481143698,2.17072173958485,1.1270773567308,1.01825663922657,1.35766741017338,0.771494018793504,0.69560190836683,0.147610147979602,0.31399745568275,0.123397163921801,0,0.500535317148282,0.393117990226406,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,1.32643988239339,1.95557971730431,1.52770577197669,0.704070744865506,0.502518772325447,0.476087281772027,0.195133647857799,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,12.5229460190478,18.5194464815681,0,0,2.52406575533005,1.56175497718655,2.36965737506079,1.91175038362042,3.7875774594007,2.83076530788832,2.42886421004937,7.3063964477828,5.53402889125133,14.4594592389813,0.283880170416537,1.06839362200353,1.62886959353576,0.329940245945071,1.32745138339963,3.15614827001476,1.81394134178851,0.565815239267694,1.77181135728464,2.45948118355142,1.03371317267288,1.81766864738753,0.712994756769443,0.948110273807448,1.05418608574999,0,3.40439605753788,4.32146625675145,7.63216234318252,9.21649250635847,11.8817956540323,12.1290795969408,13.8221177305782,18.8768268451052,0.704015124191131,0,0.220528398054962,0,0.968786560175433,0.542816324353403,0.238744688006273,0,0.291480836629851,10.0129663085675,0,1.65109494370578,0,0,0,0,0,0,0,0,2.21435195506795,3.86306987541013,2.26811215725783,3.13632444021703,1.9652630737156,1.34864346384821,1.48776220305605,0.523511883968059,0,0,0,0.747582730219894,0.496375471371293,1.94451188344048,1.54991788173277,2.02747350588934,1.40828686374905,0.651021924219751,0.838874755405687,0,0,0,1.82452693761148,3.3894615864393,0.649604114888975,0.358053391334963,0,0.240390899039938,0,0.201932899896295,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,45.7448992519824,44.6515479411962,37.8111038870002,39.1825255743608,33.5690434687615,25.6833925112498,34.4261475118221,27.0192721934532,28.5479717660049,20.192652158321,1.24544817101012,9.17757208822371,8.19521307619844,6.80698807791223,5.03071590307158,5.88299227040045,7.11189528965169,11.1258930909003,9.94849549734627,8.33900798820532,10.6461305953901,7.73367999682912,8.5213771797593,8.19521950782327,10.9127391015665,8.09699275181225,9.50251472747815,8.10218725947561,6.1812885120496,6.91834924631667,8.9146005620208,8.34136288948886,8.34526664815623,10.4649419975277,9.50504742194839,7.36147088657586,7.50004688778368,9.73357932320019,6.24698923690964,6.73370725989286,9.6094364680581,10.145961684683,6.95692773388472,9.14127362997199,9.64533054905707,23.4821943261669,9.12333272937093,9.45432637812513,5.92993829413414,1.76473135295612,0.927471342481686|short_description=p1@Mcf2l}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17207 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q3S7,uniprot:E9PXE2,uniprot:Q6PDM6,uniprot:Q8C474 | |||
|association_with_transcript=0bp_to_ENSMUST00000064464,ENSMUST00000110876,ENSMUST00000156405,NM_178076,uc009kwl.2_5end | |||
|cluster_id=chr8:12915879..12915966,+ | |||
|description=CAGE_peak_1_at_Mcf2l_5end | |||
|id=chr8:12915879..12915966,+ | |||
|ontology_enrichment_celltype=CL:0000540!9.82e-16!33;CL:0000047!9.82e-16!33;CL:0000031!9.82e-16!33;CL:0000404!9.82e-16!33;CL:0000117!2.03e-15!23;CL:0000337!2.03e-15!23;CL:0000393!1.97e-10!39;CL:0000211!1.97e-10!39;CL:0000221!1.92e-09!44;CL:0000133!1.92e-09!44;CL:0002319!3.14e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.73e-18,33;CL:0000047,6.73e-18,33;CL:0000031,6.73e-18,33;CL:0000404,6.73e-18,33;CL:0000117,1.55e-17,23;CL:0000337,1.55e-17,23;CL:0000393,6.95e-13,39;CL:0000211,6.95e-13,39;CL:0000221,3.48e-11,44;CL:0000133,3.48e-11,44;CL:0002319,6.12e-11,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.30e-27!73;UBERON:0005743!5.30e-27!73;UBERON:0002346!2.93e-26!71;UBERON:0003075!2.93e-26!71;UBERON:0007284!2.93e-26!71;UBERON:0000073!8.63e-26!75;UBERON:0001016!8.63e-26!75;UBERON:0001049!3.15e-24!52;UBERON:0005068!3.15e-24!52;UBERON:0006241!3.15e-24!52;UBERON:0007135!3.15e-24!52;UBERON:0004121!1.16e-23!102;UBERON:0000924!1.16e-23!102;UBERON:0006601!1.16e-23!102;UBERON:0000033!1.10e-22!63;UBERON:0000955!3.52e-22!50;UBERON:0006238!3.52e-22!50;UBERON:0002616!1.21e-21!49;UBERON:0003056!1.50e-21!49;UBERON:0003080!7.01e-20!40;UBERON:0002780!2.66e-19!39;UBERON:0001890!2.66e-19!39;UBERON:0006240!2.66e-19!39;UBERON:0002020!5.91e-19!34;UBERON:0002791!2.32e-15!29;UBERON:0003528!2.32e-15!29;UBERON:0001893!2.32e-15!29;UBERON:0007811!3.16e-11!86;UBERON:0000153!1.33e-10!94;UBERON:0000956!2.20e-10!21;UBERON:0001869!2.20e-10!21;UBERON:0000203!2.20e-10!21;UBERON:0002619!3.63e-08!17;UBERON:0002021!1.71e-07!10;UBERON:0000411!1.71e-07!10;UBERON:0001950!1.71e-07!10;UBERON:0000468!2.54e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.21e-32,73;UBERON:0001016,2.97e-30,75;UBERON:0002346,8.05e-30,64;UBERON:0003075,8.05e-30,64;UBERON:0007284,8.05e-30,64;UBERON:0000073,2.01e-29,54;UBERON:0001049,4.68e-28,52;UBERON:0005068,4.68e-28,52;UBERON:0006241,4.68e-28,52;UBERON:0007135,4.68e-28,52;UBERON:0004121,7.76e-26,95;UBERON:0000924,7.76e-26,95;UBERON:0006601,7.76e-26,95;UBERON:0010371,9.23e-25,73;UBERON:0003056,1.78e-24,49;UBERON:0000955,7.75e-24,47;UBERON:0006238,7.75e-24,47;UBERON:0002616,3.15e-23,46;UBERON:0003080,3.43e-23,40;UBERON:0002780,1.61e-22,39;UBERON:0001890,1.61e-22,39;UBERON:0006240,1.61e-22,39;UBERON:0002020,3.80e-22,34;UBERON:0003528,5.59e-18,29;UBERON:0002791,5.59e-18,29;UBERON:0001893,5.59e-18,29;UBERON:0010314,9.77e-18,92;UBERON:0000956,3.30e-12,21;UBERON:0001869,3.30e-12,21;UBERON:0000203,3.30e-12,21;UBERON:0002619,1.23e-09,17;UBERON:0002021,2.11e-08,10;UBERON:0000411,2.11e-08,10;UBERON:0001950,2.11e-08,10;UBERON:0002420,4.55e-07,8;UBERON:0007245,4.55e-07,8;UBERON:0010009,4.55e-07,8;UBERON:0010011,4.55e-07,8;UBERON:0000454,4.55e-07,8 | |||
|phase1_expression=5.76535849577258,0,0,0,0,0.671517087647559,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0.22940928106717,0,0,0.215471232685889,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,49.1628999888823,56.6020347821075,32.3254015788151,0,0,0,0,0,0,1.15265491596466,22.8117147078651,30.2413301862987,26.5009451302741,48.2750163642428,57.6466891883711,30.5002090045236,34.6002150375833,31.2534387447407,14.3150645299205,16.5993539510744,12.595735727012,57.8980803135551,66.2370539681446,51.0495103145625,18.4260779340911,15.757353080887,19.7109739632085,51.5600024578918,48.1216281100968,48.4638559145781,0,0.377857800533928,0.579728977403356,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,5.35204995151386,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,4.16364784238726,3.34912026143355,3.22861696158482,3.46662073271032,3.52766121407114,0.125666591329675,0,0,0,0,0,0,0,6.73395833126558,12.1479089951804,0,0,0,0,20.6711082378655,25.6200337578431,69.9894741268655,24.8568777874955,35.0330176542553,14.7529511637288,24.6606719862992,0.712875546952214,0.124406970610093,0,0.631325567659422,1.95180664444056,2.75882525320168,4.68161537493908,8.89158425230719,7.34794190834341,8.71173297936978,10.4008914261299,8.01980449290949,0.215567992932842,2.64748512234947,1.75951124163949,2.19195732427575,2.78047249225598,0.348252166522167,0,2.18937693500343,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0,0,0,0,19.767255165028,59.2730567304678,0,0.264450566663544,2.13288250535234,3.48355007790658,2.96395161040815,2.01683524623343,2.00140239460383,1.71203063501303,0.474529061544512,2.14108641141214,1.25667604400135,0.994782360205754,1.36474860983384,0,0.216138049874694,0,2.27601481143698,2.17072173958485,1.1270773567308,1.01825663922657,1.35766741017338,0.771494018793504,0.69560190836683,0.147610147979602,0.31399745568275,0.123397163921801,0,0.500535317148282,0.393117990226406,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,1.32643988239339,1.95557971730431,1.52770577197669,0.704070744865506,0.502518772325447,0.476087281772027,0.195133647857799,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,12.5229460190478,18.5194464815681,0,0,2.52406575533005,1.56175497718655,2.36965737506079,1.91175038362042,3.7875774594007,2.83076530788832,2.42886421004937,7.3063964477828,5.53402889125133,14.4594592389813,0.283880170416537,1.06839362200353,1.62886959353576,0.329940245945071,1.32745138339963,3.15614827001476,1.81394134178851,0.565815239267694,1.77181135728464,2.45948118355142,1.03371317267288,1.81766864738753,0.712994756769443,0.948110273807448,1.05418608574999,0,3.40439605753788,4.32146625675145,7.63216234318252,9.21649250635847,11.8817956540323,12.1290795969408,13.8221177305782,18.8768268451052,0.704015124191131,0,0.220528398054962,0,0.968786560175433,0.542816324353403,0.238744688006273,0,0.291480836629851,10.0129663085675,0,1.65109494370578,0,0,0,0,0,0,0,0,2.21435195506795,3.86306987541013,2.26811215725783,3.13632444021703,1.9652630737156,1.34864346384821,1.48776220305605,0.523511883968059,0,0,0,0.747582730219894,0.496375471371293,1.94451188344048,1.54991788173277,2.02747350588934,1.40828686374905,0.651021924219751,0.838874755405687,0,0,0,1.82452693761148,3.3894615864393,0.649604114888975,0.358053391334963,0,0.240390899039938,0,0.201932899896295,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,45.7448992519824,44.6515479411962,37.8111038870002,39.1825255743608,33.5690434687615,25.6833925112498,34.4261475118221,27.0192721934532,28.5479717660049,20.192652158321,1.24544817101012,9.17757208822371,8.19521307619844,6.80698807791223,5.03071590307158,5.88299227040045,7.11189528965169,11.1258930909003,9.94849549734627,8.33900798820532,10.6461305953901,7.73367999682912,8.5213771797593,8.19521950782327,10.9127391015665,8.09699275181225,9.50251472747815,8.10218725947561,6.1812885120496,6.91834924631667,8.9146005620208,8.34136288948886,8.34526664815623,10.4649419975277,9.50504742194839,7.36147088657586,7.50004688778368,9.73357932320019,6.24698923690964,6.73370725989286,9.6094364680581,10.145961684683,6.95692773388472,9.14127362997199,9.64533054905707,23.4821943261669,9.12333272937093,9.45432637812513,5.92993829413414,1.76473135295612,0.927471342481686 | |||
|short_description=p1@Mcf2l | |||
}} |
Revision as of 03:59, 6 August 2015
Short description: | p1@Mcf2l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mcf2l_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000064464, ENSMUST00000110876, ENSMUST00000156405, NM_178076, uc009kwl.2_5end |
EntrezGene: | 17207 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.73e-18 | 33 |
neuronal stem cell | 6.73e-18 | 33 |
neuroblast | 6.73e-18 | 33 |
electrically signaling cell | 6.73e-18 | 33 |
CNS neuron (sensu Vertebrata) | 1.55e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.55e-17 | 23 |
electrically responsive cell | 6.95e-13 | 39 |
electrically active cell | 6.95e-13 | 39 |
ectodermal cell | 3.48e-11 | 44 |
neurectodermal cell | 3.48e-11 | 44 |
neural cell | 6.12e-11 | 43 |