FFCP PHASE1:Mm9::chr8:56040190..56040207,+: Difference between revisions
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{{FFCP|EntrezGene=234267|HGNC=|MCL_coexpression_id=2|UniProt=P35802,Q542P2|association_with_transcript=109bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end|description=CAGE_peak_9_at_Gpm6a_5end|id=chr8:56040190..56040207,+|ontology_enrichment_celltype=CL:0000117!5.81e-20!23;CL:0000337!5.81e-20!23;CL:0000540!2.83e-11!33;CL:0000047!2.83e-11!33;CL:0000031!2.83e-11!33;CL:0000404!2.83e-11!33;CL:0000393!2.50e-08!39;CL:0000211!2.50e-08!39;CL:0000221!1.03e-07!44;CL:0000133!1.03e-07!44;CL:0002319!1.76e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,6.52e-23,23;CL:0000337,6.52e-23,23;CL:0000540,1.47e-13,33;CL:0000047,1.47e-13,33;CL:0000031,1.47e-13,33;CL:0000404,1.47e-13,33;CL:0000393,2.47e-10,39;CL:0000211,2.47e-10,39;CL:0002319,1.02e-08,43;CL:0000221,2.30e-08,44;CL:0000133,2.30e-08,44;CL:0002609,5.84e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.35e-30!52;UBERON:0005068!3.35e-30!52;UBERON:0006241!3.35e-30!52;UBERON:0007135!3.35e-30!52;UBERON:0000033!6.48e-30!63;UBERON:0000955!3.05e-28!50;UBERON:0006238!3.05e-28!50;UBERON:0002020!3.52e-28!34;UBERON:0002346!1.69e-27!71;UBERON:0003075!1.69e-27!71;UBERON:0007284!1.69e-27!71;UBERON:0003056!1.71e-27!49;UBERON:0002616!2.62e-27!49;UBERON:0001017!8.16e-27!73;UBERON:0005743!8.16e-27!73;UBERON:0000073!1.42e-25!75;UBERON:0001016!1.42e-25!75;UBERON:0003080!6.62e-24!40;UBERON:0002791!2.41e-23!29;UBERON:0003528!2.41e-23!29;UBERON:0001893!2.41e-23!29;UBERON:0002780!4.06e-23!39;UBERON:0001890!4.06e-23!39;UBERON:0006240!4.06e-23!39;UBERON:0004121!3.16e-22!102;UBERON:0000924!3.16e-22!102;UBERON:0006601!3.16e-22!102;UBERON:0007811!5.56e-17!86;UBERON:0000956!6.59e-17!21;UBERON:0001869!6.59e-17!21;UBERON:0000203!6.59e-17!21;UBERON:0000153!1.05e-14!94;UBERON:0002619!2.07e-13!17;UBERON:0002021!6.92e-12!10;UBERON:0000411!6.92e-12!10;UBERON:0001950!6.92e-12!10;UBERON:0002420!1.52e-07!8;UBERON:0007245!1.52e-07!8;UBERON:0010009!1.52e-07!8;UBERON:0010011!1.52e-07!8;UBERON:0000454!1.52e-07!8;UBERON:0003076!9.52e-07!12;UBERON:0003057!9.52e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.08e-32,34;UBERON:0000073,2.06e-31,54;UBERON:0001049,3.48e-29,52;UBERON:0005068,3.48e-29,52;UBERON:0006241,3.48e-29,52;UBERON:0007135,3.48e-29,52;UBERON:0003528,4.54e-27,29;UBERON:0002791,4.54e-27,29;UBERON:0001893,4.54e-27,29;UBERON:0002346,9.37e-27,64;UBERON:0003075,9.37e-27,64;UBERON:0007284,9.37e-27,64;UBERON:0001017,3.14e-26,73;UBERON:0001016,4.22e-25,75;UBERON:0000955,3.16e-24,47;UBERON:0006238,3.16e-24,47;UBERON:0002616,3.17e-23,46;UBERON:0003080,8.05e-22,40;UBERON:0010371,1.35e-21,73;UBERON:0003056,2.17e-21,49;UBERON:0002780,5.92e-21,39;UBERON:0001890,5.92e-21,39;UBERON:0006240,5.92e-21,39;UBERON:0004121,8.36e-21,95;UBERON:0000924,8.36e-21,95;UBERON:0006601,8.36e-21,95;UBERON:0000956,1.37e-19,21;UBERON:0001869,1.37e-19,21;UBERON:0000203,1.37e-19,21;UBERON:0002619,1.60e-15,17;UBERON:0010314,3.82e-14,92;UBERON:0002021,1.54e-13,10;UBERON:0000411,1.54e-13,10;UBERON:0001950,1.54e-13,10;UBERON:0002420,1.66e-08,8;UBERON:0007245,1.66e-08,8;UBERON:0010009,1.66e-08,8;UBERON:0010011,1.66e-08,8;UBERON:0000454,1.66e-08,8;UBERON:0003076,9.36e-08,12;UBERON:0003057,9.36e-08,12;UBERON:0002240,3.44e-07,6;UBERON:0005174,3.44e-07,6;UBERON:0001137,3.44e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71119012126069,13.7537654610729,7.60597684207415,0,0,0,0,0,0,0.384218305321555,10.5763404554647,9.85543349821342,11.3575479129746,11.1403883917483,9.93908434282261,9.79926393719632,7.66763768145891,6.43453150627015,12.1127469099328,9.19348834213351,5.06901559745603,13.1886287730194,17.2911646408554,14.5855743755893,1.95428099300967,5.6276261003168,5.95913166329559,21.2132581541041,29.043822883017,15.6575534493252,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,5.85561594023094,5.02672096352292,0,0,0,0,6.29120685500255,9.60751265919116,14.3245961408665,27.638066910572,29.9187085076487,6.64921742590592,16.2241263067758,0,0,0,0.210441855886474,0.910843100738926,0.919608417733892,1.0803727788321,0.90422890701429,1.76894897793452,2.0498195245576,2.34254311399322,1.55222022443409,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.6553737248235,15.8473103064098,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.04750385139728,0,0,0,0,0,0,0,0,0,0,0,13.1741739732941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0,0.164549020602121,0.913394847343798,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.5112137435797,65.8265088205263,67.0287750724094,92.972571647935,34.9392085083028,40.0358765616541,39.1513050134447,35.5753750547134,34.4388230827996,21.7459330935764,0.31136204275253,0.798049746802062,1.53660245178721,3.16038732188782,2.30574478890781,1.65459157605013,3.77819437262746,2.67845574410562,2.24643446714271,1.76888048234658,3.29523089857312,3.2066478035633,2.43467919421694,3.07320731543373,2.64203157195821,1.90517476513229,3.59241410429052,2.70072908649187,2.88460130562315,3.67997300335993,2.05721551431249,4.43689515398344,3.09967046931517,2.32554266611726,3.10560955370591,2.70766745253365,3.10977553883713,4.99832451731901,3.25929873230068,1.68342681497322,3.55905054372522,1.77308068276014,4.09231043169689,3.09873682371932,1.73615949883027,5.24602213669686,3.04111090979031,2.14871054048298,0.765153328275374,0.882365676478062,0.695603506861264|short_description=p9@Gpm6a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:234267 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P35802,uniprot:Q542P2 | |||
|association_with_transcript=109bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end | |||
|cluster_id=chr8:56040190..56040207,+ | |||
|description=CAGE_peak_9_at_Gpm6a_5end | |||
|id=chr8:56040190..56040207,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.81e-20!23;CL:0000337!5.81e-20!23;CL:0000540!2.83e-11!33;CL:0000047!2.83e-11!33;CL:0000031!2.83e-11!33;CL:0000404!2.83e-11!33;CL:0000393!2.50e-08!39;CL:0000211!2.50e-08!39;CL:0000221!1.03e-07!44;CL:0000133!1.03e-07!44;CL:0002319!1.76e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.52e-23,23;CL:0000337,6.52e-23,23;CL:0000540,1.47e-13,33;CL:0000047,1.47e-13,33;CL:0000031,1.47e-13,33;CL:0000404,1.47e-13,33;CL:0000393,2.47e-10,39;CL:0000211,2.47e-10,39;CL:0002319,1.02e-08,43;CL:0000221,2.30e-08,44;CL:0000133,2.30e-08,44;CL:0002609,5.84e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.35e-30!52;UBERON:0005068!3.35e-30!52;UBERON:0006241!3.35e-30!52;UBERON:0007135!3.35e-30!52;UBERON:0000033!6.48e-30!63;UBERON:0000955!3.05e-28!50;UBERON:0006238!3.05e-28!50;UBERON:0002020!3.52e-28!34;UBERON:0002346!1.69e-27!71;UBERON:0003075!1.69e-27!71;UBERON:0007284!1.69e-27!71;UBERON:0003056!1.71e-27!49;UBERON:0002616!2.62e-27!49;UBERON:0001017!8.16e-27!73;UBERON:0005743!8.16e-27!73;UBERON:0000073!1.42e-25!75;UBERON:0001016!1.42e-25!75;UBERON:0003080!6.62e-24!40;UBERON:0002791!2.41e-23!29;UBERON:0003528!2.41e-23!29;UBERON:0001893!2.41e-23!29;UBERON:0002780!4.06e-23!39;UBERON:0001890!4.06e-23!39;UBERON:0006240!4.06e-23!39;UBERON:0004121!3.16e-22!102;UBERON:0000924!3.16e-22!102;UBERON:0006601!3.16e-22!102;UBERON:0007811!5.56e-17!86;UBERON:0000956!6.59e-17!21;UBERON:0001869!6.59e-17!21;UBERON:0000203!6.59e-17!21;UBERON:0000153!1.05e-14!94;UBERON:0002619!2.07e-13!17;UBERON:0002021!6.92e-12!10;UBERON:0000411!6.92e-12!10;UBERON:0001950!6.92e-12!10;UBERON:0002420!1.52e-07!8;UBERON:0007245!1.52e-07!8;UBERON:0010009!1.52e-07!8;UBERON:0010011!1.52e-07!8;UBERON:0000454!1.52e-07!8;UBERON:0003076!9.52e-07!12;UBERON:0003057!9.52e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.08e-32,34;UBERON:0000073,2.06e-31,54;UBERON:0001049,3.48e-29,52;UBERON:0005068,3.48e-29,52;UBERON:0006241,3.48e-29,52;UBERON:0007135,3.48e-29,52;UBERON:0003528,4.54e-27,29;UBERON:0002791,4.54e-27,29;UBERON:0001893,4.54e-27,29;UBERON:0002346,9.37e-27,64;UBERON:0003075,9.37e-27,64;UBERON:0007284,9.37e-27,64;UBERON:0001017,3.14e-26,73;UBERON:0001016,4.22e-25,75;UBERON:0000955,3.16e-24,47;UBERON:0006238,3.16e-24,47;UBERON:0002616,3.17e-23,46;UBERON:0003080,8.05e-22,40;UBERON:0010371,1.35e-21,73;UBERON:0003056,2.17e-21,49;UBERON:0002780,5.92e-21,39;UBERON:0001890,5.92e-21,39;UBERON:0006240,5.92e-21,39;UBERON:0004121,8.36e-21,95;UBERON:0000924,8.36e-21,95;UBERON:0006601,8.36e-21,95;UBERON:0000956,1.37e-19,21;UBERON:0001869,1.37e-19,21;UBERON:0000203,1.37e-19,21;UBERON:0002619,1.60e-15,17;UBERON:0010314,3.82e-14,92;UBERON:0002021,1.54e-13,10;UBERON:0000411,1.54e-13,10;UBERON:0001950,1.54e-13,10;UBERON:0002420,1.66e-08,8;UBERON:0007245,1.66e-08,8;UBERON:0010009,1.66e-08,8;UBERON:0010011,1.66e-08,8;UBERON:0000454,1.66e-08,8;UBERON:0003076,9.36e-08,12;UBERON:0003057,9.36e-08,12;UBERON:0002240,3.44e-07,6;UBERON:0005174,3.44e-07,6;UBERON:0001137,3.44e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71119012126069,13.7537654610729,7.60597684207415,0,0,0,0,0,0,0.384218305321555,10.5763404554647,9.85543349821342,11.3575479129746,11.1403883917483,9.93908434282261,9.79926393719632,7.66763768145891,6.43453150627015,12.1127469099328,9.19348834213351,5.06901559745603,13.1886287730194,17.2911646408554,14.5855743755893,1.95428099300967,5.6276261003168,5.95913166329559,21.2132581541041,29.043822883017,15.6575534493252,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,5.85561594023094,5.02672096352292,0,0,0,0,6.29120685500255,9.60751265919116,14.3245961408665,27.638066910572,29.9187085076487,6.64921742590592,16.2241263067758,0,0,0,0.210441855886474,0.910843100738926,0.919608417733892,1.0803727788321,0.90422890701429,1.76894897793452,2.0498195245576,2.34254311399322,1.55222022443409,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.6553737248235,15.8473103064098,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.04750385139728,0,0,0,0,0,0,0,0,0,0,0,13.1741739732941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0,0.164549020602121,0.913394847343798,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.5112137435797,65.8265088205263,67.0287750724094,92.972571647935,34.9392085083028,40.0358765616541,39.1513050134447,35.5753750547134,34.4388230827996,21.7459330935764,0.31136204275253,0.798049746802062,1.53660245178721,3.16038732188782,2.30574478890781,1.65459157605013,3.77819437262746,2.67845574410562,2.24643446714271,1.76888048234658,3.29523089857312,3.2066478035633,2.43467919421694,3.07320731543373,2.64203157195821,1.90517476513229,3.59241410429052,2.70072908649187,2.88460130562315,3.67997300335993,2.05721551431249,4.43689515398344,3.09967046931517,2.32554266611726,3.10560955370591,2.70766745253365,3.10977553883713,4.99832451731901,3.25929873230068,1.68342681497322,3.55905054372522,1.77308068276014,4.09231043169689,3.09873682371932,1.73615949883027,5.24602213669686,3.04111090979031,2.14871054048298,0.765153328275374,0.882365676478062,0.695603506861264 | |||
|short_description=p9@Gpm6a | |||
}} |
Revision as of 22:04, 3 August 2015
Short description: | p9@Gpm6a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Gpm6a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 109bp_to_ENSMUST00000033915, NM_001253756, NM_153581, uc009lsl.2_5end |
EntrezGene: | 234267 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.52e-23 | 23 |
neuroblast (sensu Vertebrata) | 6.52e-23 | 23 |
neuron | 1.47e-13 | 33 |
neuronal stem cell | 1.47e-13 | 33 |
neuroblast | 1.47e-13 | 33 |
electrically signaling cell | 1.47e-13 | 33 |
electrically responsive cell | 2.47e-10 | 39 |
electrically active cell | 2.47e-10 | 39 |
neural cell | 1.02e-08 | 43 |
ectodermal cell | 2.30e-08 | 44 |
neurectodermal cell | 2.30e-08 | 44 |
neuron of cerebral cortex | 5.84e-07 | 6 |