FFCP PHASE1:Mm9::chr9:21850877..21850881,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=392|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:21850877..21850881,-|id=chr9:21850877..21850881,-|ontology_enrichment_celltype=CL:0000540!1.00e-20!33;CL:0000047!1.00e-20!33;CL:0000031!1.00e-20!33;CL:0000404!1.00e-20!33;CL:0000117!2.91e-18!23;CL:0000337!2.91e-18!23;CL:0002319!2.85e-16!43;CL:0000393!7.54e-16!39;CL:0000211!7.54e-16!39;CL:0000221!1.21e-15!44;CL:0000133!1.21e-15!44;CL:0000055!1.97e-12!50;CL:0002609!2.74e-07!6|ontology_enrichment_celltype_v019_2=CL:0000540,1.27e-31,33;CL:0000047,1.27e-31,33;CL:0000031,1.27e-31,33;CL:0000404,1.27e-31,33;CL:0000117,7.12e-30,23;CL:0000337,7.12e-30,23;CL:0000393,4.44e-26,39;CL:0000211,4.44e-26,39;CL:0002319,3.05e-23,43;CL:0000221,1.30e-22,44;CL:0000133,1.30e-22,44;CL:0002609,1.09e-12,6;CL:0002321,1.42e-12,70;CL:0002608,1.14e-09,3;CL:0002613,1.58e-09,3;CL:0000723,1.15e-08,91;CL:0000048,1.15e-08,91;CL:0000034,7.31e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.65e-33!73;UBERON:0005743!8.65e-33!73;UBERON:0000073!2.10e-32!75;UBERON:0001016!2.10e-32!75;UBERON:0002346!3.07e-27!71;UBERON:0003075!3.07e-27!71;UBERON:0007284!3.07e-27!71;UBERON:0004121!4.79e-27!102;UBERON:0000924!4.79e-27!102;UBERON:0006601!4.79e-27!102;UBERON:0000955!7.38e-25!50;UBERON:0006238!7.38e-25!50;UBERON:0001049!8.14e-25!52;UBERON:0005068!8.14e-25!52;UBERON:0006241!8.14e-25!52;UBERON:0007135!8.14e-25!52;UBERON:0002020!1.28e-24!34;UBERON:0002616!6.84e-24!49;UBERON:0000033!6.03e-23!63;UBERON:0002791!5.42e-22!29;UBERON:0003528!5.42e-22!29;UBERON:0001893!5.42e-22!29;UBERON:0003056!4.97e-20!49;UBERON:0003080!2.42e-19!40;UBERON:0002780!1.64e-18!39;UBERON:0001890!1.64e-18!39;UBERON:0006240!1.64e-18!39;UBERON:0000956!7.29e-15!21;UBERON:0001869!7.29e-15!21;UBERON:0000203!7.29e-15!21;UBERON:0007811!3.45e-13!86;UBERON:0000153!1.67e-11!94;UBERON:0002619!1.68e-11!17;UBERON:0002021!2.07e-09!10;UBERON:0000411!2.07e-09!10;UBERON:0001950!2.07e-09!10;UBERON:0002420!2.38e-08!8;UBERON:0007245!2.38e-08!8;UBERON:0010009!2.38e-08!8;UBERON:0010011!2.38e-08!8;UBERON:0000454!2.38e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.52e-32,73;UBERON:0001016,2.58e-31,75;UBERON:0000073,4.65e-28,54;UBERON:0002020,1.16e-26,34;UBERON:0001049,2.42e-24,52;UBERON:0005068,2.42e-24,52;UBERON:0006241,2.42e-24,52;UBERON:0007135,2.42e-24,52;UBERON:0004121,1.56e-23,95;UBERON:0000924,1.56e-23,95;UBERON:0006601,1.56e-23,95;UBERON:0002346,6.04e-23,64;UBERON:0003075,6.04e-23,64;UBERON:0007284,6.04e-23,64;UBERON:0000955,1.74e-22,47;UBERON:0006238,1.74e-22,47;UBERON:0003528,2.72e-22,29;UBERON:0002791,2.72e-22,29;UBERON:0001893,2.72e-22,29;UBERON:0002616,1.08e-20,46;UBERON:0010371,1.78e-19,73;UBERON:0003080,3.28e-17,40;UBERON:0002780,1.13e-15,39;UBERON:0001890,1.13e-15,39;UBERON:0006240,1.13e-15,39;UBERON:0010314,2.24e-14,92;UBERON:0000956,2.51e-14,21;UBERON:0001869,2.51e-14,21;UBERON:0000203,2.51e-14,21;UBERON:0003056,2.29e-13,49;UBERON:0002619,8.84e-12,17;UBERON:0002420,2.54e-09,8;UBERON:0007245,2.54e-09,8;UBERON:0010009,2.54e-09,8;UBERON:0010011,2.54e-09,8;UBERON:0000454,2.54e-09,8;UBERON:0011216,1.57e-08,194;UBERON:0000025,1.92e-08,114;UBERON:0003076,8.75e-08,12;UBERON:0003057,8.75e-08,12;UBERON:0004111,1.43e-07,122;UBERON:0002950,3.93e-07,4;UBERON:0001891,3.93e-07,4;UBERON:0009616,3.93e-07,4;UBERON:0010286,3.93e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,2.64495489636016,0,0,0,0,0,0,0.299600110518405,0,2.28117147078651,2.56511282830212,0.630974884054146,1.14260393761521,1.32521124570968,1.5923803897944,2.1086003624012,6.43453150627015,2.20231761998777,1.14918604276669,0.614426133024974,1.31886287730194,2.19570344645783,3.64639359389732,2.23346399201105,0.56276261003168,2.75036845998258,0,0.854230084794618,2.23679334990361,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0,0,0,0,1.46390398505774,1.8850203613211,0,0,0,0,1.04853447583376,0.457500602818626,0.628271760564322,0.521472960576829,1.79000820131231,0.41557608911912,0.973447578406546,0,0,0,0,0,0.229902104433473,0.180062129805349,0.30140963567143,0.136072998302656,0.640568601424249,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,1.02904612379284,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.80275294993896,1.05490517932983,0,0,0.315508219416257,2.34263246577983,1.29254038639679,0,0,0.283076530788832,1.21443210502468,1.75353514746787,0.790575555893047,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,0.572895513439397,1.03111909406213,0.685082519770642,2.2661816921691,1.35004500046361,0.900642406448441,0.906284817968409,1.03552062350364,0,0.399024873401031,0.170733605754134,0.729320151204882,0,0.183843508450014,0,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.192075457214608,0.17230640686684,0,0,0,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0,0.290692833264657,0.188218760830661,0.423073039458382,0,0,0,0,0.237270036248348,0,0.409231043169689,0,0.192906610981141,0.749431733813838,0.701794825336225,0,0.191288332068843,0,0|short_description=p@chr9:21850877..21850881,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=392 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:21850877..21850881,- | |||
|description=CAGE_peak_at_chr9:21850877..21850881,- | |||
|id=chr9:21850877..21850881,- | |||
|ontology_enrichment_celltype=CL:0000540!1.00e-20!33;CL:0000047!1.00e-20!33;CL:0000031!1.00e-20!33;CL:0000404!1.00e-20!33;CL:0000117!2.91e-18!23;CL:0000337!2.91e-18!23;CL:0002319!2.85e-16!43;CL:0000393!7.54e-16!39;CL:0000211!7.54e-16!39;CL:0000221!1.21e-15!44;CL:0000133!1.21e-15!44;CL:0000055!1.97e-12!50;CL:0002609!2.74e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.27e-31,33;CL:0000047,1.27e-31,33;CL:0000031,1.27e-31,33;CL:0000404,1.27e-31,33;CL:0000117,7.12e-30,23;CL:0000337,7.12e-30,23;CL:0000393,4.44e-26,39;CL:0000211,4.44e-26,39;CL:0002319,3.05e-23,43;CL:0000221,1.30e-22,44;CL:0000133,1.30e-22,44;CL:0002609,1.09e-12,6;CL:0002321,1.42e-12,70;CL:0002608,1.14e-09,3;CL:0002613,1.58e-09,3;CL:0000723,1.15e-08,91;CL:0000048,1.15e-08,91;CL:0000034,7.31e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.65e-33!73;UBERON:0005743!8.65e-33!73;UBERON:0000073!2.10e-32!75;UBERON:0001016!2.10e-32!75;UBERON:0002346!3.07e-27!71;UBERON:0003075!3.07e-27!71;UBERON:0007284!3.07e-27!71;UBERON:0004121!4.79e-27!102;UBERON:0000924!4.79e-27!102;UBERON:0006601!4.79e-27!102;UBERON:0000955!7.38e-25!50;UBERON:0006238!7.38e-25!50;UBERON:0001049!8.14e-25!52;UBERON:0005068!8.14e-25!52;UBERON:0006241!8.14e-25!52;UBERON:0007135!8.14e-25!52;UBERON:0002020!1.28e-24!34;UBERON:0002616!6.84e-24!49;UBERON:0000033!6.03e-23!63;UBERON:0002791!5.42e-22!29;UBERON:0003528!5.42e-22!29;UBERON:0001893!5.42e-22!29;UBERON:0003056!4.97e-20!49;UBERON:0003080!2.42e-19!40;UBERON:0002780!1.64e-18!39;UBERON:0001890!1.64e-18!39;UBERON:0006240!1.64e-18!39;UBERON:0000956!7.29e-15!21;UBERON:0001869!7.29e-15!21;UBERON:0000203!7.29e-15!21;UBERON:0007811!3.45e-13!86;UBERON:0000153!1.67e-11!94;UBERON:0002619!1.68e-11!17;UBERON:0002021!2.07e-09!10;UBERON:0000411!2.07e-09!10;UBERON:0001950!2.07e-09!10;UBERON:0002420!2.38e-08!8;UBERON:0007245!2.38e-08!8;UBERON:0010009!2.38e-08!8;UBERON:0010011!2.38e-08!8;UBERON:0000454!2.38e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.52e-32,73;UBERON:0001016,2.58e-31,75;UBERON:0000073,4.65e-28,54;UBERON:0002020,1.16e-26,34;UBERON:0001049,2.42e-24,52;UBERON:0005068,2.42e-24,52;UBERON:0006241,2.42e-24,52;UBERON:0007135,2.42e-24,52;UBERON:0004121,1.56e-23,95;UBERON:0000924,1.56e-23,95;UBERON:0006601,1.56e-23,95;UBERON:0002346,6.04e-23,64;UBERON:0003075,6.04e-23,64;UBERON:0007284,6.04e-23,64;UBERON:0000955,1.74e-22,47;UBERON:0006238,1.74e-22,47;UBERON:0003528,2.72e-22,29;UBERON:0002791,2.72e-22,29;UBERON:0001893,2.72e-22,29;UBERON:0002616,1.08e-20,46;UBERON:0010371,1.78e-19,73;UBERON:0003080,3.28e-17,40;UBERON:0002780,1.13e-15,39;UBERON:0001890,1.13e-15,39;UBERON:0006240,1.13e-15,39;UBERON:0010314,2.24e-14,92;UBERON:0000956,2.51e-14,21;UBERON:0001869,2.51e-14,21;UBERON:0000203,2.51e-14,21;UBERON:0003056,2.29e-13,49;UBERON:0002619,8.84e-12,17;UBERON:0002420,2.54e-09,8;UBERON:0007245,2.54e-09,8;UBERON:0010009,2.54e-09,8;UBERON:0010011,2.54e-09,8;UBERON:0000454,2.54e-09,8;UBERON:0011216,1.57e-08,194;UBERON:0000025,1.92e-08,114;UBERON:0003076,8.75e-08,12;UBERON:0003057,8.75e-08,12;UBERON:0004111,1.43e-07,122;UBERON:0002950,3.93e-07,4;UBERON:0001891,3.93e-07,4;UBERON:0009616,3.93e-07,4;UBERON:0010286,3.93e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,2.64495489636016,0,0,0,0,0,0,0.299600110518405,0,2.28117147078651,2.56511282830212,0.630974884054146,1.14260393761521,1.32521124570968,1.5923803897944,2.1086003624012,6.43453150627015,2.20231761998777,1.14918604276669,0.614426133024974,1.31886287730194,2.19570344645783,3.64639359389732,2.23346399201105,0.56276261003168,2.75036845998258,0,0.854230084794618,2.23679334990361,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0,0,0,0,1.46390398505774,1.8850203613211,0,0,0,0,1.04853447583376,0.457500602818626,0.628271760564322,0.521472960576829,1.79000820131231,0.41557608911912,0.973447578406546,0,0,0,0,0,0.229902104433473,0.180062129805349,0.30140963567143,0.136072998302656,0.640568601424249,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,1.02904612379284,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.80275294993896,1.05490517932983,0,0,0.315508219416257,2.34263246577983,1.29254038639679,0,0,0.283076530788832,1.21443210502468,1.75353514746787,0.790575555893047,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,0.572895513439397,1.03111909406213,0.685082519770642,2.2661816921691,1.35004500046361,0.900642406448441,0.906284817968409,1.03552062350364,0,0.399024873401031,0.170733605754134,0.729320151204882,0,0.183843508450014,0,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.192075457214608,0.17230640686684,0,0,0,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0,0.290692833264657,0.188218760830661,0.423073039458382,0,0,0,0,0.237270036248348,0,0.409231043169689,0,0.192906610981141,0.749431733813838,0.701794825336225,0,0.191288332068843,0,0 | |||
|short_description=p@chr9:21850877..21850881,- | |||
}} |
Latest revision as of 22:20, 4 August 2015
Short description: | p@chr9:21850877..21850881, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:21850877..21850881, - |
Coexpression cluster: | MCL_coexpression_mm9:392 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.27e-31 | 33 |
neuronal stem cell | 1.27e-31 | 33 |
neuroblast | 1.27e-31 | 33 |
electrically signaling cell | 1.27e-31 | 33 |
CNS neuron (sensu Vertebrata) | 7.12e-30 | 23 |
neuroblast (sensu Vertebrata) | 7.12e-30 | 23 |
electrically responsive cell | 4.44e-26 | 39 |
electrically active cell | 4.44e-26 | 39 |
neural cell | 3.05e-23 | 43 |
ectodermal cell | 1.30e-22 | 44 |
neurectodermal cell | 1.30e-22 | 44 |
neuron of cerebral cortex | 1.09e-12 | 6 |
embryonic cell | 1.42e-12 | 70 |
hippocampal neuron | 1.14e-09 | 3 |
striatum neuron | 1.58e-09 | 3 |
somatic stem cell | 1.15e-08 | 91 |
multi fate stem cell | 1.15e-08 | 91 |
stem cell | 7.31e-08 | 97 |