FFCP PHASE1:Mm9::chr9:29219432..29219459,-: Difference between revisions
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{{FFCP|EntrezGene=235106|HGNC=|MCL_coexpression_id=39|UniProt=Q99PJ0|association_with_transcript=68bp_to_uc009oqt.1_5end|description=CAGE_peak_8_at_Ntm_5end|id=chr9:29219432..29219459,-|ontology_enrichment_celltype=CL:0000117!2.67e-09!23;CL:0000337!2.67e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.85e-14,23;CL:0000337,2.85e-14,23;CL:0000540,5.80e-09,33;CL:0000047,5.80e-09,33;CL:0000031,5.80e-09,33;CL:0000404,5.80e-09,33;CL:0002319,1.59e-08,43;CL:0000221,3.01e-08,44;CL:0000133,3.01e-08,44;CL:0000393,4.15e-07,39;CL:0000211,4.15e-07,39;CL:0002612,4.45e-07,3;CL:0000120,5.38e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.47e-17!52;UBERON:0005068!4.47e-17!52;UBERON:0006241!4.47e-17!52;UBERON:0007135!4.47e-17!52;UBERON:0000073!2.91e-16!75;UBERON:0001016!2.91e-16!75;UBERON:0000033!4.99e-16!63;UBERON:0002346!1.34e-15!71;UBERON:0003075!1.34e-15!71;UBERON:0007284!1.34e-15!71;UBERON:0003056!4.64e-15!49;UBERON:0001017!5.96e-15!73;UBERON:0005743!5.96e-15!73;UBERON:0004121!7.73e-15!102;UBERON:0000924!7.73e-15!102;UBERON:0006601!7.73e-15!102;UBERON:0002020!2.04e-14!34;UBERON:0000955!2.47e-14!50;UBERON:0006238!2.47e-14!50;UBERON:0002616!1.35e-13!49;UBERON:0003080!5.16e-12!40;UBERON:0002780!1.76e-11!39;UBERON:0001890!1.76e-11!39;UBERON:0006240!1.76e-11!39;UBERON:0002791!5.16e-11!29;UBERON:0003528!5.16e-11!29;UBERON:0001893!5.16e-11!29;UBERON:0000153!4.04e-09!94;UBERON:0007811!5.66e-08!86;UBERON:0002021!2.41e-07!10;UBERON:0000411!2.41e-07!10;UBERON:0001950!2.41e-07!10;UBERON:0000956!5.92e-07!21;UBERON:0001869!5.92e-07!21;UBERON:0000203!5.92e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.51e-25,75;UBERON:0002020,2.48e-25,34;UBERON:0000073,2.48e-24,54;UBERON:0001049,1.58e-23,52;UBERON:0005068,1.58e-23,52;UBERON:0006241,1.58e-23,52;UBERON:0007135,1.58e-23,52;UBERON:0001017,9.72e-23,73;UBERON:0002346,1.38e-22,64;UBERON:0003075,1.38e-22,64;UBERON:0007284,1.38e-22,64;UBERON:0004121,1.40e-22,95;UBERON:0000924,1.40e-22,95;UBERON:0006601,1.40e-22,95;UBERON:0010371,6.94e-19,73;UBERON:0000955,1.27e-18,47;UBERON:0006238,1.27e-18,47;UBERON:0002021,1.53e-17,10;UBERON:0000411,1.53e-17,10;UBERON:0001950,1.53e-17,10;UBERON:0003528,1.90e-17,29;UBERON:0002791,1.90e-17,29;UBERON:0001893,1.90e-17,29;UBERON:0002616,4.07e-17,46;UBERON:0003056,3.80e-15,49;UBERON:0003080,1.68e-14,40;UBERON:0010314,1.83e-13,92;UBERON:0002780,2.00e-13,39;UBERON:0001890,2.00e-13,39;UBERON:0006240,2.00e-13,39;UBERON:0002619,1.16e-11,17;UBERON:0000956,5.43e-11,21;UBERON:0001869,5.43e-11,21;UBERON:0000203,5.43e-11,21;UBERON:0001948,1.75e-10,5;UBERON:0002315,1.75e-10,5;UBERON:0003076,2.57e-10,12;UBERON:0003057,2.57e-10,12;UBERON:0002240,1.15e-08,6;UBERON:0005174,1.15e-08,6;UBERON:0001137,1.15e-08,6;UBERON:0002420,5.78e-08,8;UBERON:0007245,5.78e-08,8;UBERON:0010009,5.78e-08,8;UBERON:0010011,5.78e-08,8;UBERON:0000454,5.78e-08,8;UBERON:0000025,6.88e-08,114;UBERON:0002257,4.45e-07,3;UBERON:0004111,6.06e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,3.1691570175309,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.405017814995072,0,1.99955689082663,2.20868540951614,0.367472397644862,0.575072826109418,0,0,1.91531007127782,0.614426133024974,1.84640802822271,1.73826522844578,1.56274011167028,0.279182999001381,2.8138130501584,1.68078072554491,3.83017161115768,2.27794689278565,2.05039390407831,3.3319525066601,2.56943304363071,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,14.0534782565543,12.3573557019938,0,0,0,0,1.04853447583376,0.915001205637253,1.00523481690292,3.30266208365325,3.06858548796397,0.83115217823824,1.78465389374533,0.305518091550949,0,0,1.68353484709179,0,0.459804208866946,0.900310649026746,0.452114453507145,1.02054748726992,0.640568601424249,0.562210347358373,1.81092359517311,0,0.378212160335639,0.351902248327898,1.7535658594206,1.11218899690239,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.720248245844059,0,0.590292695242212,0.771335564436891,0.232533944750408,0.268273401399619,0.467061369468678,0.16455984991348,0.32833492815819,0.0810688095458557,0,0,0,2.10289948564127,0.102904612379284,0,0,0,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.456994050438915,2.25415471346161,0.407302655690628,0.387904974335251,0.210407459670956,0.252946148497029,0,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0.642202359951168,1.28932855251423,0,0,0,0,0,0.955875191810208,0.445597348164788,0,0,0,0,5.78378369559253,0,0.534196811001766,0.651547837414304,1.81467135269789,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0.238744688006273,0,0,0.927126510052548,0,0.619160603889667,0.740778109478847,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0.209088296014469,0,0,0.330613822901344,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0,5.0827665835536,4.60325236507177,4.58316410751517,3.60891682921744,4.7955776383945,0,2.02506750069542,4.95353323546643,4.53142408984205,4.65984280576638,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.44449345560323,1.44224540067226,0.320919209591815,0,0.25347929989024,0.754505365544305,0.280924522409647,1.02440243847791,0.574354689556133,0.952587382566147,0.463537303779422,0.964546102318525,0.412085900803307,0.735994600671987,0.685738504770831,1.06485483695602,0.715308569841963,0.145346416632329,0.282328141245992,0.761531471025089,0.182927972872773,0.789209134313529,0.814824683075171,0,0.355905054372522,0.394017929502254,0.409231043169689,0,0.192906610981141,0.749431733813838,0,0.214871054048298,0.765153328275374,0,0.231867835620421|short_description=p8@Ntm}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:235106 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99PJ0 | |||
|association_with_transcript=68bp_to_uc009oqt.1_5end | |||
|cluster_id=chr9:29219432..29219459,- | |||
|description=CAGE_peak_8_at_Ntm_5end | |||
|id=chr9:29219432..29219459,- | |||
|ontology_enrichment_celltype=CL:0000117!2.67e-09!23;CL:0000337!2.67e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.85e-14,23;CL:0000337,2.85e-14,23;CL:0000540,5.80e-09,33;CL:0000047,5.80e-09,33;CL:0000031,5.80e-09,33;CL:0000404,5.80e-09,33;CL:0002319,1.59e-08,43;CL:0000221,3.01e-08,44;CL:0000133,3.01e-08,44;CL:0000393,4.15e-07,39;CL:0000211,4.15e-07,39;CL:0002612,4.45e-07,3;CL:0000120,5.38e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.47e-17!52;UBERON:0005068!4.47e-17!52;UBERON:0006241!4.47e-17!52;UBERON:0007135!4.47e-17!52;UBERON:0000073!2.91e-16!75;UBERON:0001016!2.91e-16!75;UBERON:0000033!4.99e-16!63;UBERON:0002346!1.34e-15!71;UBERON:0003075!1.34e-15!71;UBERON:0007284!1.34e-15!71;UBERON:0003056!4.64e-15!49;UBERON:0001017!5.96e-15!73;UBERON:0005743!5.96e-15!73;UBERON:0004121!7.73e-15!102;UBERON:0000924!7.73e-15!102;UBERON:0006601!7.73e-15!102;UBERON:0002020!2.04e-14!34;UBERON:0000955!2.47e-14!50;UBERON:0006238!2.47e-14!50;UBERON:0002616!1.35e-13!49;UBERON:0003080!5.16e-12!40;UBERON:0002780!1.76e-11!39;UBERON:0001890!1.76e-11!39;UBERON:0006240!1.76e-11!39;UBERON:0002791!5.16e-11!29;UBERON:0003528!5.16e-11!29;UBERON:0001893!5.16e-11!29;UBERON:0000153!4.04e-09!94;UBERON:0007811!5.66e-08!86;UBERON:0002021!2.41e-07!10;UBERON:0000411!2.41e-07!10;UBERON:0001950!2.41e-07!10;UBERON:0000956!5.92e-07!21;UBERON:0001869!5.92e-07!21;UBERON:0000203!5.92e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.51e-25,75;UBERON:0002020,2.48e-25,34;UBERON:0000073,2.48e-24,54;UBERON:0001049,1.58e-23,52;UBERON:0005068,1.58e-23,52;UBERON:0006241,1.58e-23,52;UBERON:0007135,1.58e-23,52;UBERON:0001017,9.72e-23,73;UBERON:0002346,1.38e-22,64;UBERON:0003075,1.38e-22,64;UBERON:0007284,1.38e-22,64;UBERON:0004121,1.40e-22,95;UBERON:0000924,1.40e-22,95;UBERON:0006601,1.40e-22,95;UBERON:0010371,6.94e-19,73;UBERON:0000955,1.27e-18,47;UBERON:0006238,1.27e-18,47;UBERON:0002021,1.53e-17,10;UBERON:0000411,1.53e-17,10;UBERON:0001950,1.53e-17,10;UBERON:0003528,1.90e-17,29;UBERON:0002791,1.90e-17,29;UBERON:0001893,1.90e-17,29;UBERON:0002616,4.07e-17,46;UBERON:0003056,3.80e-15,49;UBERON:0003080,1.68e-14,40;UBERON:0010314,1.83e-13,92;UBERON:0002780,2.00e-13,39;UBERON:0001890,2.00e-13,39;UBERON:0006240,2.00e-13,39;UBERON:0002619,1.16e-11,17;UBERON:0000956,5.43e-11,21;UBERON:0001869,5.43e-11,21;UBERON:0000203,5.43e-11,21;UBERON:0001948,1.75e-10,5;UBERON:0002315,1.75e-10,5;UBERON:0003076,2.57e-10,12;UBERON:0003057,2.57e-10,12;UBERON:0002240,1.15e-08,6;UBERON:0005174,1.15e-08,6;UBERON:0001137,1.15e-08,6;UBERON:0002420,5.78e-08,8;UBERON:0007245,5.78e-08,8;UBERON:0010009,5.78e-08,8;UBERON:0010011,5.78e-08,8;UBERON:0000454,5.78e-08,8;UBERON:0000025,6.88e-08,114;UBERON:0002257,4.45e-07,3;UBERON:0004111,6.06e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,3.1691570175309,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.405017814995072,0,1.99955689082663,2.20868540951614,0.367472397644862,0.575072826109418,0,0,1.91531007127782,0.614426133024974,1.84640802822271,1.73826522844578,1.56274011167028,0.279182999001381,2.8138130501584,1.68078072554491,3.83017161115768,2.27794689278565,2.05039390407831,3.3319525066601,2.56943304363071,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,14.0534782565543,12.3573557019938,0,0,0,0,1.04853447583376,0.915001205637253,1.00523481690292,3.30266208365325,3.06858548796397,0.83115217823824,1.78465389374533,0.305518091550949,0,0,1.68353484709179,0,0.459804208866946,0.900310649026746,0.452114453507145,1.02054748726992,0.640568601424249,0.562210347358373,1.81092359517311,0,0.378212160335639,0.351902248327898,1.7535658594206,1.11218899690239,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.720248245844059,0,0.590292695242212,0.771335564436891,0.232533944750408,0.268273401399619,0.467061369468678,0.16455984991348,0.32833492815819,0.0810688095458557,0,0,0,2.10289948564127,0.102904612379284,0,0,0,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.456994050438915,2.25415471346161,0.407302655690628,0.387904974335251,0.210407459670956,0.252946148497029,0,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0.642202359951168,1.28932855251423,0,0,0,0,0,0.955875191810208,0.445597348164788,0,0,0,0,5.78378369559253,0,0.534196811001766,0.651547837414304,1.81467135269789,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0.238744688006273,0,0,0.927126510052548,0,0.619160603889667,0.740778109478847,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0.209088296014469,0,0,0.330613822901344,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0,5.0827665835536,4.60325236507177,4.58316410751517,3.60891682921744,4.7955776383945,0,2.02506750069542,4.95353323546643,4.53142408984205,4.65984280576638,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.44449345560323,1.44224540067226,0.320919209591815,0,0.25347929989024,0.754505365544305,0.280924522409647,1.02440243847791,0.574354689556133,0.952587382566147,0.463537303779422,0.964546102318525,0.412085900803307,0.735994600671987,0.685738504770831,1.06485483695602,0.715308569841963,0.145346416632329,0.282328141245992,0.761531471025089,0.182927972872773,0.789209134313529,0.814824683075171,0,0.355905054372522,0.394017929502254,0.409231043169689,0,0.192906610981141,0.749431733813838,0,0.214871054048298,0.765153328275374,0,0.231867835620421 | |||
|short_description=p8@Ntm | |||
}} |
Revision as of 23:28, 4 August 2015
Short description: | p8@Ntm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Ntm_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 68bp_to_uc009oqt.1_5end |
EntrezGene: | 235106 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.85e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.85e-14 | 23 |
neuron | 5.80e-09 | 33 |
neuronal stem cell | 5.80e-09 | 33 |
neuroblast | 5.80e-09 | 33 |
electrically signaling cell | 5.80e-09 | 33 |
neural cell | 1.59e-08 | 43 |
ectodermal cell | 3.01e-08 | 44 |
neurectodermal cell | 3.01e-08 | 44 |
electrically responsive cell | 4.15e-07 | 39 |
electrically active cell | 4.15e-07 | 39 |
neuron of the ventral spinal cord | 4.45e-07 | 3 |
granule cell | 5.38e-07 | 3 |