FFCP PHASE1:Mm9::chr9:30234618..30234693,+: Difference between revisions
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{{FFCP|EntrezGene=102607|HGNC=|MCL_coexpression_id=1132|UniProt=Q80U53|association_with_transcript=0bp_to_ENSMUST00000034475_5end|description=CAGE_peak_1_at_Snx19_5end|id=chr9:30234618..30234693,+|ontology_enrichment_celltype=CL:0000393!9.04e-08!39;CL:0000211!9.04e-08!39;CL:0000117!1.67e-07!23;CL:0000337!1.67e-07!23;CL:0000540!6.29e-07!33;CL:0000047!6.29e-07!33;CL:0000031!6.29e-07!33;CL:0000404!6.29e-07!33|ontology_enrichment_celltype_v019_2=CL:0000393,9.04e-08,39;CL:0000211,9.04e-08,39;CL:0000117,1.67e-07,23;CL:0000337,1.67e-07,23;CL:0000540,6.29e-07,33;CL:0000047,6.29e-07,33;CL:0000031,6.29e-07,33;CL:0000404,6.29e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.41e-17!73;UBERON:0005743!1.41e-17!73;UBERON:0000073!1.66e-16!75;UBERON:0001016!1.66e-16!75;UBERON:0001049!1.10e-15!52;UBERON:0005068!1.10e-15!52;UBERON:0006241!1.10e-15!52;UBERON:0007135!1.10e-15!52;UBERON:0000955!3.15e-15!50;UBERON:0006238!3.15e-15!50;UBERON:0002616!1.01e-14!49;UBERON:0000033!1.87e-14!63;UBERON:0004111!1.89e-14!122;UBERON:0004121!1.99e-13!102;UBERON:0000924!1.99e-13!102;UBERON:0006601!1.99e-13!102;UBERON:0000025!2.19e-13!114;UBERON:0002346!4.42e-13!71;UBERON:0003075!4.42e-13!71;UBERON:0007284!4.42e-13!71;UBERON:0000480!6.04e-11!308;UBERON:0000467!6.04e-11!308;UBERON:0003080!1.22e-10!40;UBERON:0002020!1.62e-10!34;UBERON:0002780!4.89e-10!39;UBERON:0001890!4.89e-10!39;UBERON:0006240!4.89e-10!39;UBERON:0003056!4.92e-10!49;UBERON:0000923!7.63e-10!314;UBERON:0005291!7.63e-10!314;UBERON:0006598!7.63e-10!314;UBERON:0002532!7.63e-10!314;UBERON:0002050!1.89e-08!317;UBERON:0005423!1.89e-08!317;UBERON:0002791!2.18e-08!29;UBERON:0003528!2.18e-08!29;UBERON:0001893!2.18e-08!29;UBERON:0007811!1.73e-07!86;UBERON:0000477!2.06e-07!154;UBERON:0007023!3.57e-07!51;UBERON:0000468!5.45e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.41e-17,73;UBERON:0000073,4.54e-17,54;UBERON:0001016,1.66e-16,75;UBERON:0001049,1.10e-15,52;UBERON:0005068,1.10e-15,52;UBERON:0006241,1.10e-15,52;UBERON:0007135,1.10e-15,52;UBERON:0010314,1.43e-14,92;UBERON:0004111,1.89e-14,122;UBERON:0002346,3.02e-14,64;UBERON:0003075,3.02e-14,64;UBERON:0007284,3.02e-14,64;UBERON:0004121,3.69e-14,95;UBERON:0000924,3.69e-14,95;UBERON:0006601,3.69e-14,95;UBERON:0000025,2.19e-13,114;UBERON:0000955,2.82e-13,47;UBERON:0006238,2.82e-13,47;UBERON:0002616,8.67e-13,46;UBERON:0010371,9.23e-13,73;UBERON:0003080,1.22e-10,40;UBERON:0002020,1.62e-10,34;UBERON:0002780,4.89e-10,39;UBERON:0001890,4.89e-10,39;UBERON:0006240,4.89e-10,39;UBERON:0003056,4.92e-10,49;UBERON:0003528,2.18e-08,29;UBERON:0002791,2.18e-08,29;UBERON:0001893,2.18e-08,29;UBERON:0000923,3.04e-07,291;UBERON:0010316,3.04e-07,291;UBERON:0005291,3.04e-07,291;UBERON:0006598,3.04e-07,291;UBERON:0010317,3.04e-07,291;UBERON:0002532,3.04e-07,291;UBERON:0007023,3.57e-07,51;UBERON:0005423,9.00e-07,304|phase1_expression=25.1433689954527,20.9385244583617,30.9399482784885,46.8819527525587,43.5779285053322,17.4594442788365,18.6890112476421,21.4344716913017,7.180224829735,8.89445200023575,14.7247452673934,18.3475965689274,19.0032810223638,23.1664066410343,14.3237197580735,8.50396123037269,12.5921138063066,20.3473096656063,21.9383093769182,14.8536378129311,27.0437662680402,13.7021512657222,13.3211892460857,22.2389467682835,21.1056538581796,18.9496548157957,19.8150518233174,17.0222273821852,22.8028103347649,23.1867719379136,17.9601713630797,13.3356441426523,22.1423323530445,0,15.0202842270663,12.8000676926039,12.4543307320045,12.1374172913703,10.9386948233332,8.89990364755457,8.82347232046521,9.56263678941824,17.9638830621527,30.3411331321141,25.9524943921957,22.7597972680485,24.2541316747892,21.8025156380447,23.286735369854,32.8586529435539,30.3770534927037,21.5628846547457,13.2548258785612,21.035502118329,19.8295341494054,22.8960898071993,22.9226751951005,34.5500301825886,33.3822160418336,31.2104677770499,29.7900759647904,17.958760199664,23.1216646988896,11.6986963246582,26.6993917893083,11.3676818391376,14.081205194365,14.9845139075406,23.9523004432583,24.436074838036,21.453146057841,39.4198358477249,32.025938437984,17.0262210908786,18.6898668485561,30.3342199581307,69.3730050296149,54.7778680385455,57.6024499710913,33.1034582202787,31.1057988248193,25.0038417867245,51.6488548152555,38.2678574821542,45.5338778374894,34.4715445004191,33.4573449877892,31.5015063444758,16.1296791799682,19.0440331469099,27.2472619379577,25.8127163094416,8.83962733820076,30.7630819233556,43.5350199689938,42.5625542742469,24.2968846827931,16.7021716126497,13.5088722393492,13.0735642568826,25.4926589795792,15.3991772897181,22.9324715735981,35.5533351576666,11.6905162146056,11.6545538118545,9.60496445528088,19.4112595522402,14.7594593678888,28.0555642832519,18.3894446372104,17.0500667854799,16.1430848079241,20.9504470368145,23.0473865985981,27.2696503185396,16.5620628382031,25.1602881040646,18.5768215909474,21.0296904931632,20.3174196983562,11.6370060752453,35.4144346314432,45.9665851308129,39.794874294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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:102607 | |||
|HGNC= | |||
|MCL_coexpression_id=1132 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80U53 | |||
|association_with_transcript=0bp_to_ENSMUST00000034475_5end | |||
|cluster_id=chr9:30234618..30234693,+ | |||
|description=CAGE_peak_1_at_Snx19_5end | |||
|id=chr9:30234618..30234693,+ | |||
|ontology_enrichment_celltype=CL:0000393!9.04e-08!39;CL:0000211!9.04e-08!39;CL:0000117!1.67e-07!23;CL:0000337!1.67e-07!23;CL:0000540!6.29e-07!33;CL:0000047!6.29e-07!33;CL:0000031!6.29e-07!33;CL:0000404!6.29e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,9.04e-08,39;CL:0000211,9.04e-08,39;CL:0000117,1.67e-07,23;CL:0000337,1.67e-07,23;CL:0000540,6.29e-07,33;CL:0000047,6.29e-07,33;CL:0000031,6.29e-07,33;CL:0000404,6.29e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.41e-17!73;UBERON:0005743!1.41e-17!73;UBERON:0000073!1.66e-16!75;UBERON:0001016!1.66e-16!75;UBERON:0001049!1.10e-15!52;UBERON:0005068!1.10e-15!52;UBERON:0006241!1.10e-15!52;UBERON:0007135!1.10e-15!52;UBERON:0000955!3.15e-15!50;UBERON:0006238!3.15e-15!50;UBERON:0002616!1.01e-14!49;UBERON:0000033!1.87e-14!63;UBERON:0004111!1.89e-14!122;UBERON:0004121!1.99e-13!102;UBERON:0000924!1.99e-13!102;UBERON:0006601!1.99e-13!102;UBERON:0000025!2.19e-13!114;UBERON:0002346!4.42e-13!71;UBERON:0003075!4.42e-13!71;UBERON:0007284!4.42e-13!71;UBERON:0000480!6.04e-11!308;UBERON:0000467!6.04e-11!308;UBERON:0003080!1.22e-10!40;UBERON:0002020!1.62e-10!34;UBERON:0002780!4.89e-10!39;UBERON:0001890!4.89e-10!39;UBERON:0006240!4.89e-10!39;UBERON:0003056!4.92e-10!49;UBERON:0000923!7.63e-10!314;UBERON:0005291!7.63e-10!314;UBERON:0006598!7.63e-10!314;UBERON:0002532!7.63e-10!314;UBERON:0002050!1.89e-08!317;UBERON:0005423!1.89e-08!317;UBERON:0002791!2.18e-08!29;UBERON:0003528!2.18e-08!29;UBERON:0001893!2.18e-08!29;UBERON:0007811!1.73e-07!86;UBERON:0000477!2.06e-07!154;UBERON:0007023!3.57e-07!51;UBERON:0000468!5.45e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.41e-17,73;UBERON:0000073,4.54e-17,54;UBERON:0001016,1.66e-16,75;UBERON:0001049,1.10e-15,52;UBERON:0005068,1.10e-15,52;UBERON:0006241,1.10e-15,52;UBERON:0007135,1.10e-15,52;UBERON:0010314,1.43e-14,92;UBERON:0004111,1.89e-14,122;UBERON:0002346,3.02e-14,64;UBERON:0003075,3.02e-14,64;UBERON:0007284,3.02e-14,64;UBERON:0004121,3.69e-14,95;UBERON:0000924,3.69e-14,95;UBERON:0006601,3.69e-14,95;UBERON:0000025,2.19e-13,114;UBERON:0000955,2.82e-13,47;UBERON:0006238,2.82e-13,47;UBERON:0002616,8.67e-13,46;UBERON:0010371,9.23e-13,73;UBERON:0003080,1.22e-10,40;UBERON:0002020,1.62e-10,34;UBERON:0002780,4.89e-10,39;UBERON:0001890,4.89e-10,39;UBERON:0006240,4.89e-10,39;UBERON:0003056,4.92e-10,49;UBERON:0003528,2.18e-08,29;UBERON:0002791,2.18e-08,29;UBERON:0001893,2.18e-08,29;UBERON:0000923,3.04e-07,291;UBERON:0010316,3.04e-07,291;UBERON:0005291,3.04e-07,291;UBERON:0006598,3.04e-07,291;UBERON:0010317,3.04e-07,291;UBERON:0002532,3.04e-07,291;UBERON:0007023,3.57e-07,51;UBERON:0005423,9.00e-07,304 | |||
|phase1_expression=25.1433689954527,20.9385244583617,30.9399482784885,46.8819527525587,43.5779285053322,17.4594442788365,18.6890112476421,21.4344716913017,7.180224829735,8.89445200023575,14.7247452673934,18.3475965689274,19.0032810223638,23.1664066410343,14.3237197580735,8.50396123037269,12.5921138063066,20.3473096656063,21.9383093769182,14.8536378129311,27.0437662680402,13.7021512657222,13.3211892460857,22.2389467682835,21.1056538581796,18.9496548157957,19.8150518233174,17.0222273821852,22.8028103347649,23.1867719379136,17.9601713630797,13.3356441426523,22.1423323530445,0,15.0202842270663,12.8000676926039,12.4543307320045,12.1374172913703,10.9386948233332,8.89990364755457,8.82347232046521,9.56263678941824,17.9638830621527,30.3411331321141,25.9524943921957,22.7597972680485,24.2541316747892,21.8025156380447,23.286735369854,32.8586529435539,30.3770534927037,21.5628846547457,13.2548258785612,21.035502118329,19.8295341494054,22.8960898071993,22.9226751951005,34.5500301825886,33.3822160418336,31.2104677770499,29.7900759647904,17.958760199664,23.1216646988896,11.6986963246582,26.6993917893083,11.3676818391376,14.081205194365,14.9845139075406,23.9523004432583,24.436074838036,21.453146057841,39.4198358477249,32.025938437984,17.0262210908786,18.6898668485561,30.3342199581307,69.3730050296149,54.7778680385455,57.6024499710913,33.1034582202787,31.1057988248193,25.0038417867245,51.6488548152555,38.2678574821542,45.5338778374894,34.4715445004191,33.4573449877892,31.5015063444758,16.1296791799682,19.0440331469099,27.2472619379577,25.8127163094416,8.83962733820076,30.7630819233556,43.5350199689938,42.5625542742469,24.2968846827931,16.7021716126497,13.5088722393492,13.0735642568826,25.4926589795792,15.3991772897181,22.9324715735981,35.5533351576666,11.6905162146056,11.6545538118545,9.60496445528088,19.4112595522402,14.7594593678888,28.0555642832519,18.3894446372104,17.0500667854799,16.1430848079241,20.9504470368145,23.0473865985981,27.2696503185396,16.5620628382031,25.1602881040646,18.5768215909474,21.0296904931632,20.3174196983562,11.6370060752453,35.4144346314432,45.9665851308129,39.7948742945565,29.8884754594052,8.50687383992034,8.99854096490112,6.98886248901856,61.8635340741918,52.1550687213234,20.356005042284,48.4969853336451,42.4487659168349,43.6354893575076,45.5897949220399,25.5616803264294,19.5318943857846,27.2940579108369,31.987162094744,18.867464229592,16.3230494147766,18.7264614997563,18.8381022294644,25.9219061766559,27.1601087003882,24.549851834649,40.8751325767645,17.4610074275602,19.6670323374532,23.5774506379691,19.2892244536266,21.6876854395966,17.4126083261083,16.8741351854514,19.5053581482123,7.72434506044558,5.91900186363845,7.38825098428541,19.2626968458017,19.2311369184499,19.0865785148676,21.5437709382541,22.431122419204,18.5120535464854,22.0907247512887,24.9494263301646,20.667465598989,24.8485373369356,31.027650710949,30.4818723892418,32.8949971706998,33.8107177548218,31.9411276649685,39.1139304329277,20.6838270882362,42.9544417878937,25.1228038330367,17.0630600428187,19.5078804362768,19.9744565049245,21.3784536100743,20.9035361214178,20.7345932462689,38.91138304665,28.8223170767019,22.368833583224,25.068515477185,27.2949721966768,28.7622210769351,27.6656703839609,27.680636982357,16.8804431848243,19.9934897067025,13.5249282807697,19.5505274731502,17.8436288194216,25.8099817196372,25.1681417754544,31.4409615196553,31.7137430239577,29.2451278494667,24.6055680482334,13.3476084572875,11.7935397067922,9.44420872016386,12.7801876474757,14.2294524253926,11.7127891819453,12.6586300478357,14.2678999562031,18.1210532704134,14.3768206527355,12.6527922207291,25.8991268685085,27.7836765741823,25.4744327201115,19.2977408545347,27.8977317151573,17.4332098828846,18.2520773615069,16.9745085775188,21.8261930908307,20.7707759227852,29.0413241880937,34.1483883751148,27.1132447862649,26.1328333785554,36.0367777165921,26.3819936692338,27.1115421529456,27.6279701890687,18.0949540727127,14.1415477792864,27.538799289066,21.7990029580739,53.1422452859591,48.8772733089487,13.4426655208874,32.8212205365685,22.085575359138,17.5697434933487,22.6194567619439,22.7020358054924,25.1762501713105,18.3999745012741,29.9559919239422,25.7185154961954,24.903130010631,36.9519513885078,26.6847360191545,22.2582004584069,25.4103656591579,32.9940245945071,25.2215762845929,21.1219153454834,19.0463840887793,22.255399411196,25.1006608948657,19.0609791725235,28.1686839553361,20.3578888507403,22.4593348382374,24.6508671189936,29.5172104009997,31.9720184069379,29.9586853063333,21.7873923777885,20.568030721458,24.8630960636647,25.3596534108451,25.8634785523002,25.3405491727266,27.7063103694285,20.4164386015428,20.1240467320629,24.0375953879908,15.9939665353236,17.9225513632455,19.2398230520817,20.0545537925269,19.6969079694074,27.399198643206,50.0648315428376,13.8405413446261,20.432299928359,16.2971184085346,14.8811081033706,15.4464477324758,12.5827995263587,13.5982743995084,13.2953879707475,12.714397590007,15.2747298882418,21.0363435731455,18.9087104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| |||
|short_description=p1@Snx19 | |||
}} |
Revision as of 23:42, 4 August 2015
Short description: | p1@Snx19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Snx19_5end |
Coexpression cluster: | MCL_coexpression_mm9:1132 |
Association with transcript: | 0bp_to_ENSMUST00000034475_5end |
EntrezGene: | 102607 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 9.04e-08 | 39 |
electrically active cell | 9.04e-08 | 39 |
CNS neuron (sensu Vertebrata) | 1.67e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.67e-07 | 23 |
neuron | 6.29e-07 | 33 |
neuronal stem cell | 6.29e-07 | 33 |
neuroblast | 6.29e-07 | 33 |
electrically signaling cell | 6.29e-07 | 33 |