FFCP PHASE1:Mm9::chr9:58049332..58049351,-: Difference between revisions
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{{FFCP|EntrezGene=320563|HGNC=|MCL_coexpression_id=22|UniProt=E9Q9N7,Q5RKR3|association_with_transcript=170bp_to_ENSMUST00000163200,NM_001161535,NM_001161537,uc009pwl.1,uc012guf.1_5end|description=CAGE_peak_11_at_Islr2_5end|id=chr9:58049332..58049351,-|ontology_enrichment_celltype=CL:0000117!3.68e-14!23;CL:0000337!3.68e-14!23;CL:0000540!1.74e-09!33;CL:0000047!1.74e-09!33;CL:0000031!1.74e-09!33;CL:0000404!1.74e-09!33;CL:0002609!1.42e-07!6;CL:0000393!5.98e-07!39;CL:0000211!5.98e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.43e-19,23;CL:0000337,2.43e-19,23;CL:0002609,1.60e-17,6;CL:0000540,1.33e-12,33;CL:0000047,1.33e-12,33;CL:0000031,1.33e-12,33;CL:0000404,1.33e-12,33;CL:0000393,3.18e-10,39;CL:0000211,3.18e-10,39;CL:0002608,5.08e-10,3;CL:0002613,5.43e-10,3;CL:0000120,1.77e-09,3;CL:0002319,5.20e-09,43;CL:0000221,9.64e-09,44;CL:0000133,9.64e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!1.92e-22!49;UBERON:0002346!6.74e-21!71;UBERON:0003075!6.74e-21!71;UBERON:0007284!6.74e-21!71;UBERON:0000033!6.39e-20!63;UBERON:0003080!2.01e-18!40;UBERON:0002780!4.11e-18!39;UBERON:0001890!4.11e-18!39;UBERON:0006240!4.11e-18!39;UBERON:0001049!2.66e-17!52;UBERON:0005068!2.66e-17!52;UBERON:0006241!2.66e-17!52;UBERON:0007135!2.66e-17!52;UBERON:0002616!8.26e-17!49;UBERON:0002020!2.16e-16!34;UBERON:0000955!3.22e-16!50;UBERON:0006238!3.22e-16!50;UBERON:0004121!4.85e-16!102;UBERON:0000924!4.85e-16!102;UBERON:0006601!4.85e-16!102;UBERON:0002791!4.41e-15!29;UBERON:0003528!4.41e-15!29;UBERON:0001893!4.41e-15!29;UBERON:0001017!7.27e-15!73;UBERON:0005743!7.27e-15!73;UBERON:0000073!4.52e-14!75;UBERON:0001016!4.52e-14!75;UBERON:0007811!1.35e-10!86;UBERON:0000153!3.21e-10!94;UBERON:0000956!3.81e-10!21;UBERON:0001869!3.81e-10!21;UBERON:0000203!3.81e-10!21;UBERON:0002619!6.45e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.34e-30,49;UBERON:0002780,5.75e-25,39;UBERON:0001890,5.75e-25,39;UBERON:0006240,5.75e-25,39;UBERON:0002346,2.65e-24,64;UBERON:0003075,2.65e-24,64;UBERON:0007284,2.65e-24,64;UBERON:0003080,3.13e-24,40;UBERON:0003528,3.39e-22,29;UBERON:0002791,3.39e-22,29;UBERON:0001893,3.39e-22,29;UBERON:0002020,6.15e-21,34;UBERON:0010371,1.24e-20,73;UBERON:0002616,1.75e-20,46;UBERON:0000955,5.94e-20,47;UBERON:0006238,5.94e-20,47;UBERON:0001049,1.19e-19,52;UBERON:0005068,1.19e-19,52;UBERON:0006241,1.19e-19,52;UBERON:0007135,1.19e-19,52;UBERON:0004121,2.35e-19,95;UBERON:0000924,2.35e-19,95;UBERON:0006601,2.35e-19,95;UBERON:0000073,9.50e-19,54;UBERON:0001017,1.42e-17,73;UBERON:0000956,5.22e-17,21;UBERON:0001869,5.22e-17,21;UBERON:0000203,5.22e-17,21;UBERON:0001016,5.74e-17,75;UBERON:0010314,3.07e-15,92;UBERON:0001954,1.42e-10,7;UBERON:0003022,1.42e-10,7;UBERON:0002421,1.42e-10,7;UBERON:0000349,1.42e-10,7;UBERON:0002600,1.42e-10,7;UBERON:0000369,3.21e-10,5;UBERON:0002435,3.21e-10,5;UBERON:0000204,3.21e-10,5;UBERON:0010082,3.21e-10,5;UBERON:0002619,1.32e-09,17;UBERON:0000970,5.78e-07,9;UBERON:0000019,5.78e-07,9;UBERON:0000047,5.78e-07,9;UBERON:0010312,5.78e-07,9;UBERON:0004088,5.78e-07,9;UBERON:0002104,5.78e-07,9;UBERON:0001456,5.78e-07,9;UBERON:0003072,5.78e-07,9;UBERON:0004128,5.78e-07,9;UBERON:0003071,5.78e-07,9|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,6.87875966922632,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,2.7996195323289,2.16009501330705,2.10324961351382,0.285650984403804,0,7.59442955132715,13.9934387686625,7.35375029288017,0,0.255374676170375,0.46081959976873,8.04506355154182,10.1551284398675,6.77187381723788,0,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.915001205637253,7.79056983099759,1.04294592115366,1.27857728665165,0,0.324482526135515,0,0,0,0,0,1.83921683546778,4.14142898552303,1.05493372485001,1.02054748726992,0.768682321709099,1.03071897015702,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,5.14523061896422,0,0,0,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0.445597348164788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.900305470156551,2.32845630808958,1.28602221018955,1.41872186913819,1.60531935841864,0.658196082408484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.432021363287205,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.516639293910924,0.675824501963113,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84130094602871,1.71868654031819,0.171853182343688,0.685082519770642,0,0,0.900642406448441,0.906284817968409,1.55328093525546,0.103787347584177,1.19707462020309,1.19513524027894,0.486213434136588,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0.758091635291392,0.50695859978048,0.565879024158229,0.561849044819294,0.448176066834085,0.689225627467359,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.726732083161643,0.0941093804153306,0.507687647350059,0.182927972872773,0,0.271608227691724,0,0.830445126869219,0.29551344712669,2.04615521584845,0,0.192906610981141,0.749431733813838,0.233931608445408,0.859484216193193,0,0,0|short_description=p11@Islr2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320563 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q9N7,uniprot:Q5RKR3 | |||
|association_with_transcript=170bp_to_ENSMUST00000163200,NM_001161535,NM_001161537,uc009pwl.1,uc012guf.1_5end | |||
|cluster_id=chr9:58049332..58049351,- | |||
|description=CAGE_peak_11_at_Islr2_5end | |||
|id=chr9:58049332..58049351,- | |||
|ontology_enrichment_celltype=CL:0000117!3.68e-14!23;CL:0000337!3.68e-14!23;CL:0000540!1.74e-09!33;CL:0000047!1.74e-09!33;CL:0000031!1.74e-09!33;CL:0000404!1.74e-09!33;CL:0002609!1.42e-07!6;CL:0000393!5.98e-07!39;CL:0000211!5.98e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.43e-19,23;CL:0000337,2.43e-19,23;CL:0002609,1.60e-17,6;CL:0000540,1.33e-12,33;CL:0000047,1.33e-12,33;CL:0000031,1.33e-12,33;CL:0000404,1.33e-12,33;CL:0000393,3.18e-10,39;CL:0000211,3.18e-10,39;CL:0002608,5.08e-10,3;CL:0002613,5.43e-10,3;CL:0000120,1.77e-09,3;CL:0002319,5.20e-09,43;CL:0000221,9.64e-09,44;CL:0000133,9.64e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.92e-22!49;UBERON:0002346!6.74e-21!71;UBERON:0003075!6.74e-21!71;UBERON:0007284!6.74e-21!71;UBERON:0000033!6.39e-20!63;UBERON:0003080!2.01e-18!40;UBERON:0002780!4.11e-18!39;UBERON:0001890!4.11e-18!39;UBERON:0006240!4.11e-18!39;UBERON:0001049!2.66e-17!52;UBERON:0005068!2.66e-17!52;UBERON:0006241!2.66e-17!52;UBERON:0007135!2.66e-17!52;UBERON:0002616!8.26e-17!49;UBERON:0002020!2.16e-16!34;UBERON:0000955!3.22e-16!50;UBERON:0006238!3.22e-16!50;UBERON:0004121!4.85e-16!102;UBERON:0000924!4.85e-16!102;UBERON:0006601!4.85e-16!102;UBERON:0002791!4.41e-15!29;UBERON:0003528!4.41e-15!29;UBERON:0001893!4.41e-15!29;UBERON:0001017!7.27e-15!73;UBERON:0005743!7.27e-15!73;UBERON:0000073!4.52e-14!75;UBERON:0001016!4.52e-14!75;UBERON:0007811!1.35e-10!86;UBERON:0000153!3.21e-10!94;UBERON:0000956!3.81e-10!21;UBERON:0001869!3.81e-10!21;UBERON:0000203!3.81e-10!21;UBERON:0002619!6.45e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.34e-30,49;UBERON:0002780,5.75e-25,39;UBERON:0001890,5.75e-25,39;UBERON:0006240,5.75e-25,39;UBERON:0002346,2.65e-24,64;UBERON:0003075,2.65e-24,64;UBERON:0007284,2.65e-24,64;UBERON:0003080,3.13e-24,40;UBERON:0003528,3.39e-22,29;UBERON:0002791,3.39e-22,29;UBERON:0001893,3.39e-22,29;UBERON:0002020,6.15e-21,34;UBERON:0010371,1.24e-20,73;UBERON:0002616,1.75e-20,46;UBERON:0000955,5.94e-20,47;UBERON:0006238,5.94e-20,47;UBERON:0001049,1.19e-19,52;UBERON:0005068,1.19e-19,52;UBERON:0006241,1.19e-19,52;UBERON:0007135,1.19e-19,52;UBERON:0004121,2.35e-19,95;UBERON:0000924,2.35e-19,95;UBERON:0006601,2.35e-19,95;UBERON:0000073,9.50e-19,54;UBERON:0001017,1.42e-17,73;UBERON:0000956,5.22e-17,21;UBERON:0001869,5.22e-17,21;UBERON:0000203,5.22e-17,21;UBERON:0001016,5.74e-17,75;UBERON:0010314,3.07e-15,92;UBERON:0001954,1.42e-10,7;UBERON:0003022,1.42e-10,7;UBERON:0002421,1.42e-10,7;UBERON:0000349,1.42e-10,7;UBERON:0002600,1.42e-10,7;UBERON:0000369,3.21e-10,5;UBERON:0002435,3.21e-10,5;UBERON:0000204,3.21e-10,5;UBERON:0010082,3.21e-10,5;UBERON:0002619,1.32e-09,17;UBERON:0000970,5.78e-07,9;UBERON:0000019,5.78e-07,9;UBERON:0000047,5.78e-07,9;UBERON:0010312,5.78e-07,9;UBERON:0004088,5.78e-07,9;UBERON:0002104,5.78e-07,9;UBERON:0001456,5.78e-07,9;UBERON:0003072,5.78e-07,9;UBERON:0004128,5.78e-07,9;UBERON:0003071,5.78e-07,9 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,6.87875966922632,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,2.7996195323289,2.16009501330705,2.10324961351382,0.285650984403804,0,7.59442955132715,13.9934387686625,7.35375029288017,0,0.255374676170375,0.46081959976873,8.04506355154182,10.1551284398675,6.77187381723788,0,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.915001205637253,7.79056983099759,1.04294592115366,1.27857728665165,0,0.324482526135515,0,0,0,0,0,1.83921683546778,4.14142898552303,1.05493372485001,1.02054748726992,0.768682321709099,1.03071897015702,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,5.14523061896422,0,0,0,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0.445597348164788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.900305470156551,2.32845630808958,1.28602221018955,1.41872186913819,1.60531935841864,0.658196082408484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.432021363287205,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.516639293910924,0.675824501963113,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84130094602871,1.71868654031819,0.171853182343688,0.685082519770642,0,0,0.900642406448441,0.906284817968409,1.55328093525546,0.103787347584177,1.19707462020309,1.19513524027894,0.486213434136588,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0.758091635291392,0.50695859978048,0.565879024158229,0.561849044819294,0.448176066834085,0.689225627467359,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.726732083161643,0.0941093804153306,0.507687647350059,0.182927972872773,0,0.271608227691724,0,0.830445126869219,0.29551344712669,2.04615521584845,0,0.192906610981141,0.749431733813838,0.233931608445408,0.859484216193193,0,0,0 | |||
|short_description=p11@Islr2 | |||
}} |
Revision as of 09:36, 5 August 2015
Short description: | p11@Islr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Islr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 170bp_to_ENSMUST00000163200, NM_001161535, NM_001161537, uc009pwl.1, uc012guf.1_5end |
EntrezGene: | 320563 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.43e-19 | 23 |
neuroblast (sensu Vertebrata) | 2.43e-19 | 23 |
neuron of cerebral cortex | 1.60e-17 | 6 |
neuron | 1.33e-12 | 33 |
neuronal stem cell | 1.33e-12 | 33 |
neuroblast | 1.33e-12 | 33 |
electrically signaling cell | 1.33e-12 | 33 |
electrically responsive cell | 3.18e-10 | 39 |
electrically active cell | 3.18e-10 | 39 |
hippocampal neuron | 5.08e-10 | 3 |
striatum neuron | 5.43e-10 | 3 |
granule cell | 1.77e-09 | 3 |
neural cell | 5.20e-09 | 43 |
ectodermal cell | 9.64e-09 | 44 |
neurectodermal cell | 9.64e-09 | 44 |