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FFCP PHASE1:Mm9::chr11:60591033..60591065,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:60591033..60591065,+
|short_description=p1@Smcr8
|description=CAGE_peak_1_at_Smcr8_5end
|association_with_transcript=6bp_to_ENSMUST00000056907,ENSMUST00000102667,NM_001085440,NM_175491,uc007jgn.1,uc011xvr.1_5end
|EntrezGene=237782
|EntrezGene=237782
|HGNC=
|HGNC=
|UniProt=Q3UMB5
|UniProt=Q3UMB5
|association_with_transcript=6bp_to_ENSMUST00000056907,ENSMUST00000102667,NM_001085440,NM_175491,uc007jgn.1,uc011xvr.1_5end
|description=CAGE_peak_1_at_Smcr8_5end
|id=chr11:60591033..60591065,+
|ontology_enrichment_disease=
|phase1_expression=21.1396478178328,37.689344025051,27.7549536027617,46.5794885412518,59.105696133669,20.1455126294268,20.3242997318107,70.8887045694254,70.6759385201367,56.1754863172784,30.3055803759144,28.2393442843491,62.4882664248901,62.3307469247451,20.9859149943868,25.5118836911181,13.9912375625629,53.3131059455422,53.7488579734496,45.4096927423892,27.6390692990977,33.0638867498948,27.6871776487272,23.3588937278374,24.31738379312,14.9300310669905,22.3996238002719,26.5029616203644,30.5937705324762,17.1380488236753,19.2905544270115,26.0362576118449,22.7573971406291,31.6963362030877,14.731432607315,14.9611180822643,12.6585000882669,50.2237956884289,28.9094077473806,43.4524707498253,58.2349173150704,57.3758207365094,53.4061388334269,40.4128785701603,43.2879496307327,32.854868636941,4.69434806608824,6.97680500417429,8.12838876117546,12.4435135407541,11.198913730029,5.75010257459886,86.2402595136765,82.6912841892933,75.9571986061969,15.6928255981928,17.7650732762029,12.3761302146586,20.2316460859598,23.2756030879694,19.0149421051854,7.11573517345177,12.450127145556,13.9484456178617,15.8218618010716,8.5257613793532,4.79360176829448,6.14749288514487,17.5235444801327,19.1708432431001,15.3537221786509,15.1395021734016,15.4607978666129,19.2310554767478,23.5779858704861,21.1420320920305,25.3266526298594,25.6651549551227,24.8842583875114,21.101806036831,21.4081086029639,25.5247551572812,19.2636269310953,28.138130501584,21.3917546887534,15.6153150301044,17.5117167382897,19.5719418116566,33.6981560332669,35.0652038895485,67.8282903561926,28.3939879403858,33.3185953516798,23.746940432064,29.8897152025928,29.5697745484241,30.1955503283267,21.6446509674133,10.1316541795119,14.8402621294343,18.0279577314151,23.0987659345772,7.64415719119937,0,15.3708639117962,14.6948721975557,15.6712577954583,31.1721991633034,89.3335698582742,30.5790806473539,17.5220180033797,21.617048960162,23.9840117146301,20.4982791151567,29.6323541981976,23.8766523526383,55.3716727724997,42.6568102913739,45.9997487013935,27.3385976411122,29.5927634736927,31.0320162006542,44.7340226923493,44.5026811457552,39.3759808809296,30.654846625031,28.3961845079031,19.196887391789,30.2427140433894,42.3907509515648,49.4100651044117,33.5497120141348,49.018458294222,37.8458876848889,34.7006034414465,30.825839982874,23.830411140974,33.0922541822847,33.1066813548114,38.7213014831112,29.0168587806829,17.012755728077,23.9482632641114,27.5789816639359,36.6716730425657,39.3309121274489,32.139691523987,40.3577258352864,30.6106549964636,24.7728965019843,25.5129130037726,22.5771604400402,25.3022996795294,21.9398864908965,27.3690241422565,23.2870092177637,20.3641824320838,21.1025283834066,26.9955324425813,20.2983257084792,21.8109235782419,17.1058958387964,22.2540051450098,18.1023093207612,20.2089917882465,17.672579801031,19.3156849007726,23.3530684734339,20.7345410890985,24.7892870759434,29.7522531033291,28.2165975730891,34.688918215986,30.330650639844,45.6329188384156,30.9742883261646,34.0331346473312,27.7673094996721,25.3813018136928,18.3466970769746,27.9642391068943,33.6811486120982,36.9147552782485,45.4639246409016,28.9462727542152,46.2804062774471,32.1709067264345,42.5766850168063,42.8920991662064,35.0539569375146,30.6916030822066,34.0531577264968,24.6568271239006,21.1359748327998,21.4144697778853,27.2892779312721,23.6622034344503,25.108623520734,32.946235841738,43.1021632100438,40.3486730552333,32.5768512753553,39.4281994025908,25.5273011745624,28.8941722816408,29.9066609471855,25.5603752949514,31.835385087319,26.9903402888305,25.3172600956713,29.1843408195064,26.6324570792439,21.5652309791032,29.7712758134803,36.5084077544036,30.8146231095476,32.8297266745099,44.3848039654298,46.1882975416512,15.9172785887207,22.4891667489996,18.6719594352707,15.0201758904641,26.6334949332487,26.6608877792335,31.2213836572478,32.3152045417692,32.3338446887211,26.3100368284854,35.2306126638837,30.7379267721294,28.4958645405578,42.2215595029962,54.390568381871,35.4070276573706,48.2889306033282,48.646828766301,37.2733163363206,21.3115428989678,54.5337202761446,20.1925260426404,21.0836921920185,20.6806461823487,32.021818925642,24.7306528231457,23.7784285862619,21.8597778904443,27.179794785752,29.2512955680427,36.3093087556642,36.0527816429002,20.4775444217344,26.8763482933401,39.0979191444909,49.1157011857862,21.6074766177933,15.4185014052023,18.8605079755898,21.2617362874156,22.4427657999067,29.4608254211772,22.9026249570828,24.241821730161,31.6036757935816,24.2462799722497,40.2228618667929,29.2778060948258,23.9481255061643,20.9561067728062,20.1476812929697,26.601035046341,25.328372099494,22.5432158224906,38.9715134866687,44.587624532105,34.3167954799389,37.0487708732336,27.5360042412272,37.7826758468419,32.8705440858449,27.097522088712,29.7095028538561,39.0584321084,38.0121869121545,37.9333355371233,24.5600372876235,26.1124283591293,28.8203739217177,41.0082683163076,34.7742823273914,39.0950388985867,37.9268435797113,39.5251925080652,14.3200592702267,23.5670315217946,18.7053909756701,20.3050040744986,19.4452115293456,15.940467153471,24.1407180028829,25.0439970847768,25.9138382564189,26.1822246049422,43.4937519160848,20.2929457926309,22.5769984526408,18.8622679121091,25.4731056730702,22.086329814692,23.9917698196905,28.2830945136267,21.7441322689397,24.7468052844678,23.4336597201226,27.0748205882394,62.8862130050075,17.8398189455344,23.6235201479103,22.3463815521807,26.8540043501222,37.7494574084403,33.5345304160713,35.7408655762477,42.6078418781183,35.3599582879199,39.4230383885046,49.995892819493,40.7938208554997,46.9845146769907,44.2124248049662,16.8709324564289,21.9798948693215,19.4746154982331,24.7282680361204,37.9118600411388,33.5167472409095,32.3696252409389,37.6179078026523,30.4965995013216,31.7624413189952,24.0616115644547,21.3097946106173,26.0331357512844,27.1941803060292,17.550585006027,28.3702358031259,29.0011141749891,28.9945774581019,26.5695609815492,25.537591897666,24.2441720170871,25.0399918580343,24.105513702218,22.6127515393517,30.4478017088213,23.9000666397117,28.5618096536716,24.2589323293246,27.8827229879264,28.6712038906836,23.0358108375911,26.2503124859964,31.187459642898,23.8146845641537,27.0010479451513,27.3931093058461,32.1427002626579,21.0494455792188,17.8292011240416,23.7817580253512,18.3595866259437,27.3251263268778,28.2328141245992,27.4151329569032,29.4514036325164,21.0455769150274,25.3953692891762,20.7622640513363,25.7437989329458,22.7545354287552,22.5077073743329,28.8182524605897,23.7275131506804,27.9787847290499,29.9432458810123,32.2306581072447,29.267114806533,26.2503788752223,21.5637087126992
|phase1_expression=21.1396478178328,37.689344025051,27.7549536027617,46.5794885412518,59.105696133669,20.1455126294268,20.3242997318107,70.8887045694254,70.6759385201367,56.1754863172784,30.3055803759144,28.2393442843491,62.4882664248901,62.3307469247451,20.9859149943868,25.5118836911181,13.9912375625629,53.3131059455422,53.7488579734496,45.4096927423892,27.6390692990977,33.0638867498948,27.6871776487272,23.3588937278374,24.31738379312,14.9300310669905,22.3996238002719,26.5029616203644,30.5937705324762,17.1380488236753,19.2905544270115,26.0362576118449,22.7573971406291,31.6963362030877,14.731432607315,14.9611180822643,12.6585000882669,50.2237956884289,28.9094077473806,43.4524707498253,58.2349173150704,57.3758207365094,53.4061388334269,40.4128785701603,43.2879496307327,32.854868636941,4.69434806608824,6.97680500417429,8.12838876117546,12.4435135407541,11.198913730029,5.75010257459886,86.2402595136765,82.6912841892933,75.9571986061969,15.6928255981928,17.7650732762029,12.3761302146586,20.2316460859598,23.2756030879694,19.0149421051854,7.11573517345177,12.450127145556,13.9484456178617,15.8218618010716,8.5257613793532,4.79360176829448,6.14749288514487,17.5235444801327,19.1708432431001,15.3537221786509,15.1395021734016,15.4607978666129,19.2310554767478,23.5779858704861,21.1420320920305,25.3266526298594,25.6651549551227,24.8842583875114,21.101806036831,21.4081086029639,25.5247551572812,19.2636269310953,28.138130501584,21.3917546887534,15.6153150301044,17.5117167382897,19.5719418116566,33.6981560332669,35.0652038895485,67.8282903561926,28.3939879403858,33.3185953516798,23.746940432064,29.8897152025928,29.5697745484241,30.1955503283267,21.6446509674133,10.1316541795119,14.8402621294343,18.0279577314151,23.0987659345772,7.64415719119937,0,15.3708639117962,14.6948721975557,15.6712577954583,31.1721991633034,89.3335698582742,30.5790806473539,17.5220180033797,21.617048960162,23.9840117146301,20.4982791151567,29.6323541981976,23.8766523526383,55.3716727724997,42.6568102913739,45.9997487013935,27.3385976411122,29.5927634736927,31.0320162006542,44.7340226923493,44.5026811457552,39.3759808809296,30.654846625031,28.3961845079031,19.196887391789,30.2427140433894,42.3907509515648,49.4100651044117,33.5497120141348,49.018458294222,37.8458876848889,34.7006034414465,30.825839982874,23.830411140974,33.0922541822847,33.1066813548114,38.7213014831112,29.0168587806829,17.012755728077,23.9482632641114,27.5789816639359,36.6716730425657,39.3309121274489,32.139691523987,40.3577258352864,30.6106549964636,24.7728965019843,25.5129130037726,22.5771604400402,25.3022996795294,21.9398864908965,27.3690241422565,23.2870092177637,20.3641824320838,21.1025283834066,26.9955324425813,20.2983257084792,21.8109235782419,17.1058958387964,22.2540051450098,18.1023093207612,20.2089917882465,17.672579801031,19.3156849007726,23.3530684734339,20.7345410890985,24.7892870759434,29.7522531033291,28.2165975730891,34.688918215986,30.330650639844,45.6329188384156,30.9742883261646,34.0331346473312,27.7673094996721,25.3813018136928,18.3466970769746,27.9642391068943,33.6811486120982,36.9147552782485,45.4639246409016,28.9462727542152,46.2804062774471,32.1709067264345,42.5766850168063,42.8920991662064,35.0539569375146,30.6916030822066,34.0531577264968,24.6568271239006,21.1359748327998,21.4144697778853,27.2892779312721,23.6622034344503,25.108623520734,32.946235841738,43.1021632100438,40.3486730552333,32.5768512753553,39.4281994025908,25.5273011745624,28.8941722816408,29.9066609471855,25.5603752949514,31.835385087319,26.9903402888305,25.3172600956713,29.1843408195064,26.6324570792439,21.5652309791032,29.7712758134803,36.5084077544036,30.8146231095476,32.8297266745099,44.3848039654298,46.1882975416512,15.9172785887207,22.4891667489996,18.6719594352707,15.0201758904641,26.6334949332487,26.6608877792335,31.2213836572478,32.3152045417692,32.3338446887211,26.3100368284854,35.2306126638837,30.7379267721294,28.4958645405578,42.2215595029962,54.390568381871,35.4070276573706,48.2889306033282,48.646828766301,37.2733163363206,21.3115428989678,54.5337202761446,20.1925260426404,21.0836921920185,20.6806461823487,32.021818925642,24.7306528231457,23.7784285862619,21.8597778904443,27.179794785752,29.2512955680427,36.3093087556642,36.0527816429002,20.4775444217344,26.8763482933401,39.0979191444909,49.1157011857862,21.6074766177933,15.4185014052023,18.8605079755898,21.2617362874156,22.4427657999067,29.4608254211772,22.9026249570828,24.241821730161,31.6036757935816,24.2462799722497,40.2228618667929,29.2778060948258,23.9481255061643,20.9561067728062,20.1476812929697,26.601035046341,25.328372099494,22.5432158224906,38.9715134866687,44.587624532105,34.3167954799389,37.0487708732336,27.5360042412272,37.7826758468419,32.8705440858449,27.097522088712,29.7095028538561,39.0584321084,38.0121869121545,37.9333355371233,24.5600372876235,26.1124283591293,28.8203739217177,41.0082683163076,34.7742823273914,39.0950388985867,37.9268435797113,39.5251925080652,14.3200592702267,23.5670315217946,18.7053909756701,20.3050040744986,19.4452115293456,15.940467153471,24.1407180028829,25.0439970847768,25.9138382564189,26.1822246049422,43.4937519160848,20.2929457926309,22.5769984526408,18.8622679121091,25.4731056730702,22.086329814692,23.9917698196905,28.2830945136267,21.7441322689397,24.7468052844678,23.4336597201226,27.0748205882394,62.8862130050075,17.8398189455344,23.6235201479103,22.3463815521807,26.8540043501222,37.7494574084403,33.5345304160713,35.7408655762477,42.6078418781183,35.3599582879199,39.4230383885046,49.995892819493,40.7938208554997,46.9845146769907,44.2124248049662,16.8709324564289,21.9798948693215,19.4746154982331,24.7282680361204,37.9118600411388,33.5167472409095,32.3696252409389,37.6179078026523,30.4965995013216,31.7624413189952,24.0616115644547,21.3097946106173,26.0331357512844,27.1941803060292,17.550585006027,28.3702358031259,29.0011141749891,28.9945774581019,26.5695609815492,25.537591897666,24.2441720170871,25.0399918580343,24.105513702218,22.6127515393517,30.4478017088213,23.9000666397117,28.5618096536716,24.2589323293246,27.8827229879264,28.6712038906836,23.0358108375911,26.2503124859964,31.187459642898,23.8146845641537,27.0010479451513,27.3931093058461,32.1427002626579,21.0494455792188,17.8292011240416,23.7817580253512,18.3595866259437,27.3251263268778,28.2328141245992,27.4151329569032,29.4514036325164,21.0455769150274,25.3953692891762,20.7622640513363,25.7437989329458,22.7545354287552,22.5077073743329,28.8182524605897,23.7275131506804,27.9787847290499,29.9432458810123,32.2306581072447,29.267114806533,26.2503788752223,21.5637087126992
|short_description=p1@Smcr8
}}
}}

Revision as of 17:11, 17 April 2012

Short description:p1@Smcr8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smcr8_5end
Coexpression cluster:NA
Association with transcript: 6bp_to_ENSMUST00000056907, ENSMUST00000102667, NM_001085440, NM_175491, uc007jgn.1, uc011xvr.1_5end
EntrezGene:Smcr8
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Smcr8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G721.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I537.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I627.75
CD326+ enterocyte, pool1.CNhs13542.11848-124I346.58
CD326+ enterocyte, pool2.CNhs13197.11849-124I459.11
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I720.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I820.32
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E970.89
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E770.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F256.18
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E630.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F128.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E462.49
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E862.33
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A120.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A325.51
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A253.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A453.75
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A645.41
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A327.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H233.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I927.69
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D123.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D224.32
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I122.40
GP2+ M cell, pool3.CNhs13240.11847-124I226.50
Ileum epithelium, pool1.CNhs13199.10252-104B930.59
Ileum epithelium, pool2.CNhs13232.10253-104C117.14
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C819.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I326.04
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G622.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.96
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G850.22
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H343.45
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G958.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H257.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H453.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D840.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D943.29
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B332.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.13
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A286.24
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I982.69
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A175.96
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.77
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.38
Mouse Granule cells, donor1.CNhs12131.11713-123C320.23
Mouse Granule cells, donor2.CNhs12357.11731-123E323.28
Mouse Granule cells, donor3.CNhs12108.11636-122C719.01
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E715.82
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.17
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.35
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.46
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D219.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F223.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D325.33
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.67
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D724.88
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.57
Mouse Schwann, donor1.CNhs12507.11728-123D933.70
Mouse Schwann, donor2.CNhs12573.11746-123F935.07
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G367.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F728.39
Mouse hepatocyte, donor1.CNhs13078.11714-123C433.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C823.75
Mouse hepatocyte, donor6.CNhs13090.11822-124F429.89
Mouse hepatocyte, donor8.CNhs13091.11824-124F629.57
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A730.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I721.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.84
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G618.03
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.69
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.67
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B631.17
accessory axillary lymph node, adult.CNhs10475.1063-29H989.33
adrenal gland, adult.CNhs10508.49-24D730.58
adrenal gland, embryo E14.CNhs11038.406-44C517.52
adrenal gland, embryo E16.CNhs11004.1254-43D621.62
adrenal gland, embryo E17.CNhs11043.1263-45I123.98
adrenal gland, embryo E18.CNhs11026.1262-18F520.50
adrenal gland, neonate N00.CNhs11191.1311-23C129.63
adrenal gland, neonate N25.CNhs11223.1377-27I323.88
amnion, adult pregnant day17.5.CNhs10488.583-22A855.37
aorta, adult.CNhs10498.46-23H142.66
bone (os femoris), adult.CNhs10483.56-12G246.00
bone (os femoris), neonate N02.CNhs11227.1985-43F527.34
bone (os femoris), neonate N16.CNhs11225.1525-43A629.59
bone (os femoris), neonate N20.CNhs11195.1350-25C331.03
cecum, adult.CNhs10467.37-13H444.73
cerebellum, adult.CNhs10494.15-8B244.50
cerebellum, neonate N30.CNhs11135.1395-42I239.38
colon, adult.CNhs10468.36-18H730.65
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C728.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D430.24
corpora quadrigemina, adult.CNhs10501.16-22A442.39
corpus striatum, adult.CNhs10487.19-21D849.41
corpus striatum, neonate N00.CNhs11226.630-43F133.55
cortex, adult.CNhs10473.12-14D549.02
cortex, neonate N30.CNhs11107.1392-42F237.85
diencephalon, adult.CNhs10482.20-12F234.70
diencephalon, neonate N30.CNhs11201.1388-42B230.83
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B123.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A233.09
epididymis, adult.CNhs10490.58-23B233.11
eyeball, adult.CNhs10484.31-12G438.72
eyeball, embryo E12.CNhs11016.345-16C629.02
eyeball, embryo E14.CNhs10521.399-16E217.01
eyeball, embryo E15.CNhs10593.426-16C923.95
eyeball, embryo E17.CNhs11023.1261-18D427.58
eyeball, neonate N00.CNhs11207.633-15C636.67
eyeball, neonate N01.CNhs11140.1532-43E739.33
eyeball, neonate N02.CNhs11205.1551-44G832.14
eyeball, neonate N16.CNhs11188.777-19A240.36
forelimb, embryo E11.CNhs10596.335-25E230.61
forelimb, embryo E12.CNhs10600.359-14H224.77
forelimb, embryo E13.CNhs10589.384-1E225.51
forelimb, embryo E14.CNhs10577.413-26A822.58
forelimb, embryo E15.CNhs11007.437-20E725.30
forelimb, embryo E17.CNhs10598.1517-43C421.94
forelimb, embryo E18.CNhs11008.1520-43B527.37
gonad, embryo E13.CNhs11044.1564-45I623.29
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C820.36
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D221.10
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D527.00
heart, embryo E11.CNhs10586.331-24E920.30
heart, embryo E12.CNhs11015.353-12F521.81
heart, embryo E13.CNhs11013.376-3I917.11
heart, embryo E14.CNhs10597.403-26D422.25
heart, embryo E15.CNhs11017.431-16C818.10
heart, embryo E16.CNhs11021.457-17C620.21
heart, embryo E17.CNhs11025.479-18E517.67
heart, embryo E18.CNhs11030.1283-20G319.32
heart, neonate N00.CNhs11213.639-21E323.35
heart, neonate N03.CNhs11221.1349-25I220.73
heart, neonate N10.CNhs11118.749-24G124.79
heart, neonate N16.CNhs11209.782-15G129.75
heart, neonate N20.CNhs11127.821-26I628.22
heart, neonate N25.CNhs11196.1351-25D334.69
heart, neonate N30.CNhs11202.1390-42D230.33
hippocampus, adult.CNhs10478.13-16E845.63
hippocampus, neonate N00.CNhs11228.627-43G130.97
intestinal mucosa, adult.CNhs10506.860-29I334.03
intestine, adult.CNhs10496.178-9A327.77
intestine, embryo E12.CNhs11019.1251-16I525.38
intestine, embryo E13.CNhs11010.381-16D518.35
intestine, embryo E15.CNhs10602.976-16D827.96
intestine, embryo E16.CNhs10585.463-22H433.68
intestine, embryo E17.CNhs10582.482-18D336.91
intestine, embryo E18.CNhs10526.1289-20F745.46
intestine, neonate N00.CNhs11126.644-26D128.95
intestine, neonate N01.CNhs11192.1322-23E946.28
intestine, neonate N06.CNhs11102.688-20B832.17
intestine, neonate N07.CNhs11095.720-20F242.58
intestine, neonate N10.CNhs11098.755-23A542.89
intestine, neonate N20.CNhs11187.827-18D135.05
intestine, neonate N25.CNhs11121.1352-25E330.69
intestine, neonate N30.CNhs11131.1384-42G134.05
kidney, embryo E14.CNhs10606.411-4I924.66
kidney, embryo E15.CNhs10997.434-16F821.14
kidney, embryo E16.CNhs10584.464-22A521.41
kidney, embryo E17.CNhs11028.483-18I227.29
kidney, embryo E18.CNhs11001.1288-20C723.66
kidney, neonate N00.CNhs11214.646-21G725.11
kidney, neonate N10.CNhs11206.758-6D532.95
kidney, neonate N20.CNhs11113.832-19I143.10
kidney, neonate N25.CNhs11122.1353-25F340.35
kidney, neonate N30.CNhs11203.1385-42H132.58
liver, adult pregnant day01.CNhs10466.508-5B239.43
liver, embryo E12.CNhs10601.355-15F825.53
liver, embryo E13.CNhs10524.378-3H628.89
liver, embryo E14.CNhs10594.409-16E129.91
liver, embryo E15.CNhs10520.433-16D725.56
liver, embryo E16.CNhs10523.462-17F531.84
liver, embryo E17.CNhs10510.481-18A326.99
liver, embryo E18.CNhs10579.499-43G425.32
liver, neonate N00.CNhs11117.641-24F429.18
liver, neonate N03.CNhs11123.1345-25G226.63
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H229.77
liver, neonate N10.CNhs11115.751-24B936.51
liver, neonate N20.CNhs11220.823-25A330.81
liver, neonate N25.CNhs11198.1368-26H132.83
liver, neonate N30.CNhs11106.1382-42D144.38
lung, adult.CNhs10474.28-22B146.19
lung, embryo E12.CNhs10522.354-16G215.92
lung, embryo E14.CNhs10604.404-26F822.49
lung, embryo E15.CNhs11020.432-17C518.67
lung, embryo E16.CNhs10998.458-17B615.02
lung, embryo E17.CNhs10605.480-44A626.63
lung, embryo E18.CNhs10583.1287-20I626.66
lung, neonate N00.CNhs11224.640-42C631.22
lung, neonate N06.CNhs11212.683-20E532.32
lung, neonate N07.CNhs11111.715-19A332.33
lung, neonate N10.CNhs11219.750-23E626.31
lung, neonate N20.CNhs11109.822-18A435.23
lung, neonate N25.CNhs11119.1359-25C730.74
lung, neonate N30.CNhs11133.1394-42H228.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A142.22
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A154.39
mammary gland, adult lactating day02.CNhs10480.595-22B635.41
mammary gland, adult pregnant day19.CNhs10476.588-5H248.29
medulla oblongata, adult.CNhs10477.17-12C248.65
medulla oblongata, neonate N30.CNhs11200.1396-42A337.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C721.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C254.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E120.19
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D732.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D824.73
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D923.78
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D527.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D629.25
olfactory brain, adult.CNhs10489.18-22I936.31
ovary, adult.CNhs10507.91-2I736.05
ovary, embryo E18.CNhs11040.505-44H720.48
ovary, neonate N00.CNhs11217.1299-22I426.88
oviduct, adult pregnant day01.CNhs10500.988-6G639.10
pancreas, adult.CNhs10486.34-16E449.12
pancreas, embryo E14.CNhs11012.405-44F421.61
pancreas, embryo E15.CNhs11042.1556-45F215.42
pancreas, embryo E16.CNhs11003.460-26E518.86
pancreas, embryo E17.CNhs10599.1558-45G321.26
pancreas, embryo E18.CNhs10580.1535-43I722.44
pancreas, neonate N00.CNhs11105.645-26G929.46
pancreas, neonate N01.CNhs11138.1531-43D722.90
pancreas, neonate N02.CNhs11139.1539-43D824.24
pancreas, neonate N16.CNhs11136.787-43B631.60
pancreas, neonate N25.CNhs11094.1555-45E224.25
pancreas, neonate N30.CNhs11182.1548-44H540.22
pituitary gland, adult.CNhs10493.21-1G829.28
pituitary gland, embryo E12.CNhs11018.346-16E623.95
pituitary gland, embryo E13.CNhs11009.370-44C720.96
pituitary gland, embryo E14.CNhs11037.398-44A520.15
pituitary gland, embryo E15.CNhs10592.427-16B926.60
pituitary gland, embryo E16.CNhs11036.449-43F625.33
pituitary gland, embryo E17.CNhs11039.1265-44F522.54
pituitary gland, neonate N00.CNhs11190.1308-22E938.97
placenta, adult pregnant day10.CNhs10472.539-13I744.59
placenta, adult pregnant day17.CNhs10464.577-18G334.32
prostate, adult.CNhs10470.859-1F837.05
skin, adult.CNhs10492.30-1C327.54
skin, neonate N00.CNhs11124.650-25G437.78
skin, neonate N03.CNhs11215.662-22H332.87
skin, neonate N06.CNhs11097.693-20I527.10
skin, neonate N10.CNhs11108.762-6C429.71
small intestine, neonate N16.CNhs11114.790-21I139.06
spinal cord, adult.CNhs10505.24-13C938.01
spleen, adult.CNhs10465.25-2G237.93
spleen, embryo E16.CNhs11035.461-43C124.56
spleen, embryo E18.CNhs11011.1271-21F226.11
spleen, neonate N10.CNhs11116.752-24D128.82
spleen, neonate N20.CNhs11112.824-19H141.01
spleen, neonate N25.CNhs11099.1354-25G334.77
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C639.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C937.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D339.53
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E323.57
stomach, embryo E15.CNhs10603.1252-16G818.71
stomach, embryo E16.CNhs11022.459-17D420.31
stomach, embryo E17.CNhs11006.1035-18D519.45
stomach, embryo E18.CNhs10999.1286-20C615.94
stomach, neonate N03.CNhs11193.1340-24B824.14
stomach, neonate N07.CNhs11210.718-18A925.04
stomach, neonate N25.CNhs11104.1355-25E425.91
stomach, neonate N30.CNhs11134.1386-42I126.18
submandibular gland, adult.CNhs10469.59-29C143.49
testis, adult.CNhs10504.57-7G520.29
testis, embryo E13.CNhs11031.389-23F522.58
testis, embryo E15.CNhs11034.443-27C518.86
testis, embryo E16.CNhs11033.470-26G525.47
testis, embryo E17.CNhs11029.486-18I522.09
testis, embryo E18.CNhs11027.503-18G523.99
testis, neonate N00.CNhs11189.1300-22B728.28
testis, neonate N07.CNhs11222.726-26I421.74
testis, neonate N10.CNhs11204.763-44D924.75
testis, neonate N20.CNhs11110.839-18H323.43
testis, neonate N30.CNhs11130.1391-42E227.07
thymus, adult.CNhs10471.38-12B562.89
thymus, embryo E14.CNhs11041.402-44I417.84
thymus, embryo E15.CNhs11005.430-45I223.62
thymus, embryo E16.CNhs11002.456-26C522.35
thymus, embryo E17.CNhs10581.478-18C126.85
thymus, embryo E18.CNhs10595.1273-19G437.75
thymus, neonate N02.CNhs11181.1541-43F833.53
thymus, neonate N03.CNhs11137.2104-43C735.74
thymus, neonate N06.CNhs11197.681-26C442.61
thymus, neonate N07.CNhs11211.713-19D335.36
thymus, neonate N10.CNhs11194.748-24E439.42
thymus, neonate N20.CNhs11186.820-7A250.00
thymus, neonate N25.CNhs11125.1362-25G740.79
thymus, neonate N30.CNhs11132.1393-42G246.98
tongue, adult.CNhs10499.32-1B444.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H316.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F721.98
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G519.47
urinary bladder, adult.CNhs10481.879-12E424.73
uterus, adult pregnant day19.CNhs10497.590-15F537.91
uterus, adult.CNhs10509.92-27E533.52
vagina, adult.CNhs10502.89-27D532.37
vesicular gland, adult.CNhs10491.51-27F837.62
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A130.50
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D721.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A527.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.37
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A928.99
whole body, embryo E11.CNhs11014.324-5I826.57
whole body, embryo E12.CNhs10587.857-27C925.54
whole body, embryo E13.CNhs10512.372-23H224.24
whole body, embryo E14.5.CNhs10578.420-27D225.04
whole body, embryo E14.CNhs10519.395-14B124.11
whole body, embryo E16.CNhs10514.453-14F222.61
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G530.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G523.90
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G528.56
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G527.88
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G528.67
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.04
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G526.25
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G531.19
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G527.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G527.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G532.14
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G521.05
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.36
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G527.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G528.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G529.45
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G525.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.74
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G522.75
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.51
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.82
whole body, embryo E17.5.CNhs10513.490-9F923.73
whole body, embryo E17.CNhs10517.475-3I527.98
whole body, embryo E18.CNhs10516.493-3B329.94
whole body, neonate N00.CNhs10525.657-19C232.23
whole body, neonate N01.CNhs10576.659-23C629.27
whole body, neonate N06.CNhs10515.692-21D126.25
whole body, neonate N10.CNhs10518.761-6B421.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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