Personal tools

FFCP PHASE1:Mm9::chr9:54765105..54765135,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:54765105..54765135,+
|short_description=p1@Agphd1
|description=CAGE_peak_1_at_Agphd1_5end
|association_with_transcript=0bp_to_ENSMUST00000124295,ENSMUST00000125983_5end
|EntrezGene=235386
|EntrezGene=235386
|HGNC=
|HGNC=
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000124295,ENSMUST00000125983_5end
|description=CAGE_peak_1_at_Agphd1_5end
|id=chr9:54765105..54765135,+
|ontology_enrichment_disease=
|phase1_expression=2.08193501236232,1.04692622291808,1.36499771816861,5.14189159221611,5.00895729946347,0.33575854382378,0.233612640595526,1.67860320474049,0.563154888606667,0.234064526321993,0,0.0797721589953364,0.684802919724823,1.13646523144697,0,0.202475267389826,0,0.630924330716475,1.09691546884591,0.84877930359606,9.60989178707088,0,0,0.799962113967033,0.45881856213434,1.14846392823004,1.29228598847722,0.646413698057667,3.6104449696711,2.01624103807945,0,0,0,0,0.577703239502549,0.664938581433969,0.408338712524738,0,0,0,0,0,0,5.03587271902309,5.37297735463427,6.42413632565885,0.782391344348039,0.872100625521786,1.75748946187577,1.36100929351998,3.07970127575798,1.43752564364972,0,0,1.00828139742739,2.31533492432352,1.71920063963254,1.03134418455488,0.809265843438391,2.11596391708813,1.26766280701236,1.69422266034566,5.33576877666684,0,0.988866362566974,0,0.898800331555214,1.53687322128622,0.933206510776299,1.08004750665353,1.26194976810829,0.571301968807607,1.32521124570968,0.489963196859816,0.766763768145891,0,1.10115880999389,0.893811366596314,1.53606533256243,0.395658863190582,0.640413505216868,1.04182674111352,1.3959149950069,1.12552522006336,1.22238598221448,0.589257170947335,0.427115042397309,0.372798891650601,0.530083353332288,0.831287161174641,3.47837386442013,42.1607699720879,1.3599426674155,63.6849766132624,59.1296539877379,133.512012355006,29.9146614880631,0.170430322578058,0,0,1.12674735821344,1.28326477414318,2.54805239706646,7.11066703153331,0.649473123033642,1.01343946190039,0,54.8082622651488,1.03575153458869,2.52351636410202,2.4287945747259,1.52232739156071,1.38369298353635,2.41156224884196,1.76383060703557,0.628332956648377,1.23597483867187,1.73519228303894,0.884610551949874,1.94120219936891,1.76673214768315,1.45462575940567,1.86391761218122,1.75668478206928,0.41889341362691,1.02182822083437,0.11981512450592,0,0,0.748953197024114,1.83000241127451,0.628271760564322,1.21677024134594,0.255715457330331,1.0389402227978,0.486723789203273,2.85150218780886,1.24406970610093,1.0108910337347,0.841767423545896,2.86264974517948,2.5289231487682,2.34080768746954,3.16480117455002,1.83698547708585,1.15302348256365,1.68663104207512,1.55222022443409,3.01795190105979,4.53854592402766,4.39877810409872,3.5071317188412,3.61461423993277,3.48252166522167,2.05782136407943,2.38841120182192,0,0,0,1.65700618028402,2.11073453982987,2.16074473753218,1.18372367792605,1.18058539048442,1.23413690309903,0.697601834251224,0,1.05088808130453,0.822799249567402,1.97000956894914,1.13496333364198,1.16959989940266,1.53685080703735,0.939444931322602,1.05144974282064,0.720332286654991,1.65209391491899,0.528901133327089,2.77274725695804,2.78684006232526,1.80414445850931,2.62188582010345,1.55664630691409,1.90225626112559,3.79623249235609,1.15289268306808,1.50801125280162,1.98956472041151,2.53453313254856,0.898819408654221,2.16138049874694,1.99141273254367,2.0863469104839,4.68418901699888,12.3978509240388,18.124968178233,21.3347735884388,17.9547698919216,26.6225821293123,59.4868896357797,53.8505636495916,59.9710216659951,36.1672205046322,2.50267658574141,1.37591296579242,2.02375901146368,3.65148218499305,6.02942899381042,8.65727896056827,16.1109836972454,37.6153726118082,35.6929837144506,71.8841032636773,74.0560485860322,63.3436476422558,47.2322501761099,39.6468283883426,68.5069800335981,4.0645701836653,3.03186258832776,1.95557971730431,2.20668611507745,3.75504397261603,5.02518772325447,3.33261097240419,3.70753930929818,5.51723004371669,3.10050565508285,4.14582398509466,3.93271955317771,2.76295970985433,5.20736610893442,0,0,1.96705709207614,1.37968373152366,0.963303539926752,1.28932855251423,1.14754461763673,1.26235463602186,1.57754109708128,2.73307121007647,3.01592756825919,1.67278158566786,1.33679204449436,1.69845918473299,2.83367491172426,2.04579100537918,3.16230222357219,0.321321316421807,1.98716119291576,2.31485284767432,3.25773918707152,2.3095817216155,0,2.42780636154981,1.209294227859,1.88605079755898,1.47650946440386,2.76691633149535,1.80899805217755,1.81766864738753,1.78248689192361,1.58018378967908,1.05418608574999,1.03135543248187,0.340439605753788,3.78128297465751,2.58717367565509,1.92903331528433,2.6601035046341,2.31879462882692,2.30368628842969,1.2178597964584,0.23467170806371,0.847328283455281,2.42581237860458,0.32977250588296,2.42196640043858,2.17126529741361,1.90995750405018,0.820704498725306,4.08073171281791,1.29797711407357,0.341741761595705,2.68302928352189,1.29636169158798,0.565105371014073,0.136694227721025,1.14389086603261,0.169978429993855,0,0,0,3.00519193902079,2.43983360552218,2.26811215725783,3.97267762427491,1.74690050996942,3.37160865962052,7.10819719237889,3.14107130380836,2.46268449254406,1.24267862617385,0.56369293868419,2.24274819065968,2.48187735685646,3.11121901350476,2.19571699912143,2.87225413334323,2.34714477291508,2.73429208172295,2.51662426621706,1.69108884578204,0.288030006257865,0.316011120628178,2.22997736819181,0.821687657318618,0.649604114888975,0.358053391334963,0.198681354781265,0.600977247599844,0.886137163047463,0.302899349844443,0.381034033274999,0.201652370273681,0.0974578807397524,0.192423683280659,0.467507608726276,1.36038230169127,1.55390167361845,1.07656627931371,1.00730769818447,2.51146472241848,1.50145980360946,1.09890974560359,0.214368379079066,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0,0,0,0,0,0,2.90604573235695,5.58634822761443,3.24393850932855,2.91728060481953,2.09613162627982,3.49302666055027,4.22268782823069,4.53277125925567,4.1719497246936,3.53776096469316,3.29523089857312,3.77252682772152,2.62196220915671,3.45735822986294,4.42253110958222,2.38146845641537,3.24476112645595,4.05109362973781,3.29668720642645,3.82717192349433,4.4573002810104,3.19456451086807,3.33810665926249,2.32554266611726,3.19971893412124,3.13074049199203,4.024415403201,4.47218509444333,2.30866993537965,4.48913817326191,3.44041552560105,3.15214343601803,6.13846564754534,3.25367366490529,4.82266527452853,2.49810577937946,5.14649538579898,4.51229213501426,2.10417165275728,3.08827986767322,1.15933917810211
|phase1_expression=2.08193501236232,1.04692622291808,1.36499771816861,5.14189159221611,5.00895729946347,0.33575854382378,0.233612640595526,1.67860320474049,0.563154888606667,0.234064526321993,0,0.0797721589953364,0.684802919724823,1.13646523144697,0,0.202475267389826,0,0.630924330716475,1.09691546884591,0.84877930359606,9.60989178707088,0,0,0.799962113967033,0.45881856213434,1.14846392823004,1.29228598847722,0.646413698057667,3.6104449696711,2.01624103807945,0,0,0,0,0.577703239502549,0.664938581433969,0.408338712524738,0,0,0,0,0,0,5.03587271902309,5.37297735463427,6.42413632565885,0.782391344348039,0.872100625521786,1.75748946187577,1.36100929351998,3.07970127575798,1.43752564364972,0,0,1.00828139742739,2.31533492432352,1.71920063963254,1.03134418455488,0.809265843438391,2.11596391708813,1.26766280701236,1.69422266034566,5.33576877666684,0,0.988866362566974,0,0.898800331555214,1.53687322128622,0.933206510776299,1.08004750665353,1.26194976810829,0.571301968807607,1.32521124570968,0.489963196859816,0.766763768145891,0,1.10115880999389,0.893811366596314,1.53606533256243,0.395658863190582,0.640413505216868,1.04182674111352,1.3959149950069,1.12552522006336,1.22238598221448,0.589257170947335,0.427115042397309,0.372798891650601,0.530083353332288,0.831287161174641,3.47837386442013,42.1607699720879,1.3599426674155,63.6849766132624,59.1296539877379,133.512012355006,29.9146614880631,0.170430322578058,0,0,1.12674735821344,1.28326477414318,2.54805239706646,7.11066703153331,0.649473123033642,1.01343946190039,0,54.8082622651488,1.03575153458869,2.52351636410202,2.4287945747259,1.52232739156071,1.38369298353635,2.41156224884196,1.76383060703557,0.628332956648377,1.23597483867187,1.73519228303894,0.884610551949874,1.94120219936891,1.76673214768315,1.45462575940567,1.86391761218122,1.75668478206928,0.41889341362691,1.02182822083437,0.11981512450592,0,0,0.748953197024114,1.83000241127451,0.628271760564322,1.21677024134594,0.255715457330331,1.0389402227978,0.486723789203273,2.85150218780886,1.24406970610093,1.0108910337347,0.841767423545896,2.86264974517948,2.5289231487682,2.34080768746954,3.16480117455002,1.83698547708585,1.15302348256365,1.68663104207512,1.55222022443409,3.01795190105979,4.53854592402766,4.39877810409872,3.5071317188412,3.61461423993277,3.48252166522167,2.05782136407943,2.38841120182192,0,0,0,1.65700618028402,2.11073453982987,2.16074473753218,1.18372367792605,1.18058539048442,1.23413690309903,0.697601834251224,0,1.05088808130453,0.822799249567402,1.97000956894914,1.13496333364198,1.16959989940266,1.53685080703735,0.939444931322602,1.05144974282064,0.720332286654991,1.65209391491899,0.528901133327089,2.77274725695804,2.78684006232526,1.80414445850931,2.62188582010345,1.55664630691409,1.90225626112559,3.79623249235609,1.15289268306808,1.50801125280162,1.98956472041151,2.53453313254856,0.898819408654221,2.16138049874694,1.99141273254367,2.0863469104839,4.68418901699888,12.3978509240388,18.124968178233,21.3347735884388,17.9547698919216,26.6225821293123,59.4868896357797,53.8505636495916,59.9710216659951,36.1672205046322,2.50267658574141,1.37591296579242,2.02375901146368,3.65148218499305,6.02942899381042,8.65727896056827,16.1109836972454,37.6153726118082,35.6929837144506,71.8841032636773,74.0560485860322,63.3436476422558,47.2322501761099,39.6468283883426,68.5069800335981,4.0645701836653,3.03186258832776,1.95557971730431,2.20668611507745,3.75504397261603,5.02518772325447,3.33261097240419,3.70753930929818,5.51723004371669,3.10050565508285,4.14582398509466,3.93271955317771,2.76295970985433,5.20736610893442,0,0,1.96705709207614,1.37968373152366,0.963303539926752,1.28932855251423,1.14754461763673,1.26235463602186,1.57754109708128,2.73307121007647,3.01592756825919,1.67278158566786,1.33679204449436,1.69845918473299,2.83367491172426,2.04579100537918,3.16230222357219,0.321321316421807,1.98716119291576,2.31485284767432,3.25773918707152,2.3095817216155,0,2.42780636154981,1.209294227859,1.88605079755898,1.47650946440386,2.76691633149535,1.80899805217755,1.81766864738753,1.78248689192361,1.58018378967908,1.05418608574999,1.03135543248187,0.340439605753788,3.78128297465751,2.58717367565509,1.92903331528433,2.6601035046341,2.31879462882692,2.30368628842969,1.2178597964584,0.23467170806371,0.847328283455281,2.42581237860458,0.32977250588296,2.42196640043858,2.17126529741361,1.90995750405018,0.820704498725306,4.08073171281791,1.29797711407357,0.341741761595705,2.68302928352189,1.29636169158798,0.565105371014073,0.136694227721025,1.14389086603261,0.169978429993855,0,0,0,3.00519193902079,2.43983360552218,2.26811215725783,3.97267762427491,1.74690050996942,3.37160865962052,7.10819719237889,3.14107130380836,2.46268449254406,1.24267862617385,0.56369293868419,2.24274819065968,2.48187735685646,3.11121901350476,2.19571699912143,2.87225413334323,2.34714477291508,2.73429208172295,2.51662426621706,1.69108884578204,0.288030006257865,0.316011120628178,2.22997736819181,0.821687657318618,0.649604114888975,0.358053391334963,0.198681354781265,0.600977247599844,0.886137163047463,0.302899349844443,0.381034033274999,0.201652370273681,0.0974578807397524,0.192423683280659,0.467507608726276,1.36038230169127,1.55390167361845,1.07656627931371,1.00730769818447,2.51146472241848,1.50145980360946,1.09890974560359,0.214368379079066,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0,0,0,0,0,0,2.90604573235695,5.58634822761443,3.24393850932855,2.91728060481953,2.09613162627982,3.49302666055027,4.22268782823069,4.53277125925567,4.1719497246936,3.53776096469316,3.29523089857312,3.77252682772152,2.62196220915671,3.45735822986294,4.42253110958222,2.38146845641537,3.24476112645595,4.05109362973781,3.29668720642645,3.82717192349433,4.4573002810104,3.19456451086807,3.33810665926249,2.32554266611726,3.19971893412124,3.13074049199203,4.024415403201,4.47218509444333,2.30866993537965,4.48913817326191,3.44041552560105,3.15214343601803,6.13846564754534,3.25367366490529,4.82266527452853,2.49810577937946,5.14649538579898,4.51229213501426,2.10417165275728,3.08827986767322,1.15933917810211
|short_description=p1@Agphd1
}}
}}

Revision as of 03:16, 19 April 2012

Short description:p1@Agphd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Agphd1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000124295, ENSMUST00000125983_5end
EntrezGene:Agphd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Agphd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B93.61
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.37
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.42
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F742.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C863.68
Mouse hepatocyte, donor6.CNhs13090.11822-124F459.13
Mouse hepatocyte, donor8.CNhs13091.11824-124F6133.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A729.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B654.81
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I218.12
kidney, embryo E18.CNhs11001.1288-20C721.33
kidney, neonate N00.CNhs11214.646-21G717.95
kidney, neonate N10.CNhs11206.758-6D526.62
kidney, neonate N20.CNhs11113.832-19I159.49
kidney, neonate N25.CNhs11122.1353-25F353.85
kidney, neonate N30.CNhs11203.1385-42H159.97
liver, adult pregnant day01.CNhs10466.508-5B236.17
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F56.03
liver, embryo E17.CNhs10510.481-18A38.66
liver, embryo E18.CNhs10579.499-43G416.11
liver, neonate N00.CNhs11117.641-24F437.62
liver, neonate N03.CNhs11123.1345-25G235.69
liver, neonate N06.CNhs11101.684-20A871.88
liver, neonate N07.CNhs11103.716-20H274.06
liver, neonate N10.CNhs11115.751-24B963.34
liver, neonate N20.CNhs11220.823-25A347.23
liver, neonate N25.CNhs11198.1368-26H139.65
liver, neonate N30.CNhs11106.1382-42D168.51
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A65.03
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E55.52
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H25.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B83.37
stomach, neonate N07.CNhs11210.718-18A97.11
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:54765105..54765135,%2B&oldid=1011118"