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FFCP PHASE1:Mm9::chr9:55785900..55785950,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:55785900..55785950,-
|short_description=p1@Scaper
|description=CAGE_peak_1_at_Scaper_5end
|association_with_transcript=0bp_to_NM_001081341,uc009pso.1,uc009psp.1,uc012gtu.1_5end
|EntrezGene=244891
|EntrezGene=244891
|HGNC=
|HGNC=
|UniProt=F8VQ70,Q501L8,Q8BIZ8
|UniProt=F8VQ70,Q501L8,Q8BIZ8
|association_with_transcript=0bp_to_NM_001081341,uc009pso.1,uc009psp.1,uc012gtu.1_5end
|description=CAGE_peak_1_at_Scaper_5end
|id=chr9:55785900..55785950,-
|ontology_enrichment_disease=
|phase1_expression=6.08565618998217,3.48975407639361,1.36499771816861,8.16653370528441,8.01433167914156,3.02182689441402,3.73780224952841,10.2007425518845,2.81577444303333,5.38348410540585,5.13653904676515,5.34473465268754,13.8672591244277,12.4136971434976,2.6648780945253,4.25198061518635,2.79824751251259,14.8267217718372,22.2125382441297,11.8829102503448,10.8855411393369,3.77305614563364,3.13439746966722,4.95976510659561,2.2940928106717,2.29692785646008,2.58457197695445,2.58565479223067,5.51067916423484,3.2763916868791,3.99114919179548,0.635030673459631,0.61506478758457,0,4.62162591602039,3.15845826181135,4.90006455029686,22.600708059793,6.2506827561904,21.4644735029257,19.4116391050235,15.7100461540443,20.8769451803396,7.1761186246079,6.9950082541465,6.42413632565885,1.56478268869608,1.96222640742402,1.09843091367236,1.36100929351998,0.979904951377538,0,9.89917375740644,7.25362142011344,10.4189077734164,2.31533492432352,8.02293631828519,2.57836046138721,5.86717736492834,5.28990979272033,6.33831403506179,1.0165335962074,0.889294796111139,1.7997994345628,0.988866362566974,1.4209602298922,0.898800331555214,1.15265491596466,8.50254820929517,5.13022565660425,4.83747411108179,3.14216082844184,3.97563373712904,7.7169203505421,4.31304619582064,2.75765635983006,4.40463523997555,9.57655035638908,8.29475279583715,5.40733779693795,6.67859798297591,9.89735404057844,3.62937898701795,10.6924895906019,10.0846843532695,7.36571463684169,9.5389026135399,7.08317894136142,3.3319525066601,5.7434385681157,14.2033599463822,1.72084775396277,0,2.15881276655127,8.4470934268197,4.48026887097336,6.60088774619234,5.79463096765396,3.63700406444016,1.06001872353102,5.35204995151386,5.13305909657271,0,0,4.32982082022428,4.56047757855178,3.53867111510348,7.76450382089608,40.9121856162531,10.5393918736026,5.37804512975021,3.95805121805784,3.68984795609694,3.91878865436819,8.93674174231356,6.53466274914312,12.6069433544531,15.6167305473505,5.30766331169925,8.8971767471075,7.72945314611377,6.78825354389311,13.0474232852686,20.2018749937968,20.7352239745321,6.64188343542338,4.07371423320129,2.39961092397363,2.41433431438823,18.7238299256028,19.6725259212009,10.9319286338192,17.7300806596122,14.8314965251592,16.8308316093244,14.2772311499627,10.9986512958342,8.9573018839267,10.3616330957807,11.3638602178696,8.97831056442656,6.43725892413724,11.7040384373477,14.0155480587215,12.3146063463903,14.3487366719032,11.7127155699661,15.2634988736019,3.88022387279116,10.9681526497335,16.3634545472472,9.64461222681329,15.0145514581823,10.7958171621872,17.9030458674911,8.7575077400137,2.80885274925294,3.3455227924913,2.55747149456033,6.83515049367156,7.03578179943289,10.0834754418168,10.6535131013345,9.83821158737019,12.1871019181029,8.13868806626427,9.12129564758705,12.8441876603886,9.37991144506839,11.8200574136949,11.5117709555115,11.2573990317506,10.3188554186794,11.4075455946316,19.3466752678997,16.9792610425819,12.5559137533843,3.43785736662608,5.11891801284562,10.2184135618593,8.89185483122444,7.86565746031036,8.2279876222602,8.56015317506516,5.21981967698963,7.08205505313247,7.28872105520782,12.3353012665514,8.38345574612217,8.98819408654222,7.5648317456143,8.16479220342906,1.13800740571849,7.65465034485183,3.38123207019241,8.96065842519383,8.92181440971078,11.0814595426703,11.6355228308633,10.9231509504906,11.303908404579,7.77402132707343,3.55743152504579,4.83850806576673,5.11053387294328,3.82265591054251,5.68008339887808,5.788251834058,4.83789118384698,3.16465751195892,6.64754429777645,5.49122826376163,7.18841032636773,7.07067800570156,10.9213185590096,6.06189307073068,6.99649912735457,3.85954817090694,12.9327233116623,6.253216588426,8.47417877498535,6.62005834523234,9.15291968325158,11.3904255060435,13.8065311713888,7.61021226645415,14.6600684018758,13.730810758224,11.1618338060241,14.0922450655535,14.3328534948693,12.8737662137545,12.0633027151418,3.80733978673097,5.4094070032094,9.3818493743609,13.1651483789989,16.0580010631318,3.77050374366353,6.5642441073137,5.99465616890888,4.68526493155966,6.67812532971677,5.01834475700359,4.67877215573028,4.24614796183249,3.64329631507405,5.26060544240361,7.51046778098395,12.5315313404505,12.6326675835359,4.45164009168138,11.5649741141039,15.3422214364458,7.96470830039777,5.34117399540959,5.13950046840077,7.92141334974772,4.42952839321159,5.84126781093462,7.75284879504663,11.2695456138027,4.9909632973861,10.7452497698177,2.10837217149998,4.12542172992747,26.2138496430417,8.10274923140896,2.58717367565509,6.85878512101095,10.4630737848941,9.63191615051181,11.6829804627506,3.65357938937519,9.85621173867584,12.921756322693,7.93902232997863,16.488625294148,15.8235138161987,13.6910339586914,13.2503301843481,15.1009627765456,8.74442509889552,16.3174265769249,10.0813819670733,7.42992724667601,8.88933731374616,5.08594833912666,6.97140561377228,6.63456702298916,7.13909405974192,6.85762116385924,6.35719879500349,3.81868247206045,6.64305586520384,10.5726122905961,9.61247533314031,13.381650944926,9.38959024108564,8.36158947585888,12.1500579916244,8.11443420150492,12.5726524093039,13.0481255748254,8.45539408026285,9.27002585472668,5.62558867554132,12.250424865675,9.42866711387437,9.96841140395591,16.7820851263428,13.9318691783027,21.4961656072707,15.9445519745164,12.0972602628303,10.1123558601017,5.0681303822541,7.49789987303239,5.84643703400078,9.13036147904155,7.9472541912506,7.81270421879797,7.82754494025259,13.024672043311,9.75447125183998,9.17518284745249,10.1356195969343,11.7378446801202,9.46702907670709,12.0167103316062,4.66170502085536,1.70456327558004,5.03653849092235,14.6824091464465,10.322536149815,13.0037653229758,18.8644173589578,12.0377304968487,7.90652579663893,12.889106622201,15.4681788628637,9.96748457593388,13.7016503954128,16.6186657425734,12.8254275044043,14.8605997063993,13.5942722695261,14.497288729051,5.70830411712972,10.7736715818278,8.87814749921498,11.1829089851415,5.03071590307158,6.43452279575049,10.8900896622791,12.3621034343337,12.5158491740808,9.34979683526051,15.4622372933046,12.0720858487089,13.8589431055426,13.9574832242615,12.2337548875456,12.3836359733599,10.6613579869267,14.4681915347779,9.47797571847605,12.6591071315582,10.9718160763333,12.2458306249943,12.8755542571553,11.046327664057,11.104906889009,11.5922012811597,11.5244622909847,14.4688341290814,11.5433496768983,11.2228454331548,12.931216975535,9.85044823755635,13.5046244245997,12.2400104536913,11.1885834369062,7.24450676020043,12.1644436391612,7.09074478359384,12.6250299165437,7.72069966918304,8.57910991795559
|phase1_expression=6.08565618998217,3.48975407639361,1.36499771816861,8.16653370528441,8.01433167914156,3.02182689441402,3.73780224952841,10.2007425518845,2.81577444303333,5.38348410540585,5.13653904676515,5.34473465268754,13.8672591244277,12.4136971434976,2.6648780945253,4.25198061518635,2.79824751251259,14.8267217718372,22.2125382441297,11.8829102503448,10.8855411393369,3.77305614563364,3.13439746966722,4.95976510659561,2.2940928106717,2.29692785646008,2.58457197695445,2.58565479223067,5.51067916423484,3.2763916868791,3.99114919179548,0.635030673459631,0.61506478758457,0,4.62162591602039,3.15845826181135,4.90006455029686,22.600708059793,6.2506827561904,21.4644735029257,19.4116391050235,15.7100461540443,20.8769451803396,7.1761186246079,6.9950082541465,6.42413632565885,1.56478268869608,1.96222640742402,1.09843091367236,1.36100929351998,0.979904951377538,0,9.89917375740644,7.25362142011344,10.4189077734164,2.31533492432352,8.02293631828519,2.57836046138721,5.86717736492834,5.28990979272033,6.33831403506179,1.0165335962074,0.889294796111139,1.7997994345628,0.988866362566974,1.4209602298922,0.898800331555214,1.15265491596466,8.50254820929517,5.13022565660425,4.83747411108179,3.14216082844184,3.97563373712904,7.7169203505421,4.31304619582064,2.75765635983006,4.40463523997555,9.57655035638908,8.29475279583715,5.40733779693795,6.67859798297591,9.89735404057844,3.62937898701795,10.6924895906019,10.0846843532695,7.36571463684169,9.5389026135399,7.08317894136142,3.3319525066601,5.7434385681157,14.2033599463822,1.72084775396277,0,2.15881276655127,8.4470934268197,4.48026887097336,6.60088774619234,5.79463096765396,3.63700406444016,1.06001872353102,5.35204995151386,5.13305909657271,0,0,4.32982082022428,4.56047757855178,3.53867111510348,7.76450382089608,40.9121856162531,10.5393918736026,5.37804512975021,3.95805121805784,3.68984795609694,3.91878865436819,8.93674174231356,6.53466274914312,12.6069433544531,15.6167305473505,5.30766331169925,8.8971767471075,7.72945314611377,6.78825354389311,13.0474232852686,20.2018749937968,20.7352239745321,6.64188343542338,4.07371423320129,2.39961092397363,2.41433431438823,18.7238299256028,19.6725259212009,10.9319286338192,17.7300806596122,14.8314965251592,16.8308316093244,14.2772311499627,10.9986512958342,8.9573018839267,10.3616330957807,11.3638602178696,8.97831056442656,6.43725892413724,11.7040384373477,14.0155480587215,12.3146063463903,14.3487366719032,11.7127155699661,15.2634988736019,3.88022387279116,10.9681526497335,16.3634545472472,9.64461222681329,15.0145514581823,10.7958171621872,17.9030458674911,8.7575077400137,2.80885274925294,3.3455227924913,2.55747149456033,6.83515049367156,7.03578179943289,10.0834754418168,10.6535131013345,9.83821158737019,12.1871019181029,8.13868806626427,9.12129564758705,12.8441876603886,9.37991144506839,11.8200574136949,11.5117709555115,11.2573990317506,10.3188554186794,11.4075455946316,19.3466752678997,16.9792610425819,12.5559137533843,3.43785736662608,5.11891801284562,10.2184135618593,8.89185483122444,7.86565746031036,8.2279876222602,8.56015317506516,5.21981967698963,7.08205505313247,7.28872105520782,12.3353012665514,8.38345574612217,8.98819408654222,7.5648317456143,8.16479220342906,1.13800740571849,7.65465034485183,3.38123207019241,8.96065842519383,8.92181440971078,11.0814595426703,11.6355228308633,10.9231509504906,11.303908404579,7.77402132707343,3.55743152504579,4.83850806576673,5.11053387294328,3.82265591054251,5.68008339887808,5.788251834058,4.83789118384698,3.16465751195892,6.64754429777645,5.49122826376163,7.18841032636773,7.07067800570156,10.9213185590096,6.06189307073068,6.99649912735457,3.85954817090694,12.9327233116623,6.253216588426,8.47417877498535,6.62005834523234,9.15291968325158,11.3904255060435,13.8065311713888,7.61021226645415,14.6600684018758,13.730810758224,11.1618338060241,14.0922450655535,14.3328534948693,12.8737662137545,12.0633027151418,3.80733978673097,5.4094070032094,9.3818493743609,13.1651483789989,16.0580010631318,3.77050374366353,6.5642441073137,5.99465616890888,4.68526493155966,6.67812532971677,5.01834475700359,4.67877215573028,4.24614796183249,3.64329631507405,5.26060544240361,7.51046778098395,12.5315313404505,12.6326675835359,4.45164009168138,11.5649741141039,15.3422214364458,7.96470830039777,5.34117399540959,5.13950046840077,7.92141334974772,4.42952839321159,5.84126781093462,7.75284879504663,11.2695456138027,4.9909632973861,10.7452497698177,2.10837217149998,4.12542172992747,26.2138496430417,8.10274923140896,2.58717367565509,6.85878512101095,10.4630737848941,9.63191615051181,11.6829804627506,3.65357938937519,9.85621173867584,12.921756322693,7.93902232997863,16.488625294148,15.8235138161987,13.6910339586914,13.2503301843481,15.1009627765456,8.74442509889552,16.3174265769249,10.0813819670733,7.42992724667601,8.88933731374616,5.08594833912666,6.97140561377228,6.63456702298916,7.13909405974192,6.85762116385924,6.35719879500349,3.81868247206045,6.64305586520384,10.5726122905961,9.61247533314031,13.381650944926,9.38959024108564,8.36158947585888,12.1500579916244,8.11443420150492,12.5726524093039,13.0481255748254,8.45539408026285,9.27002585472668,5.62558867554132,12.250424865675,9.42866711387437,9.96841140395591,16.7820851263428,13.9318691783027,21.4961656072707,15.9445519745164,12.0972602628303,10.1123558601017,5.0681303822541,7.49789987303239,5.84643703400078,9.13036147904155,7.9472541912506,7.81270421879797,7.82754494025259,13.024672043311,9.75447125183998,9.17518284745249,10.1356195969343,11.7378446801202,9.46702907670709,12.0167103316062,4.66170502085536,1.70456327558004,5.03653849092235,14.6824091464465,10.322536149815,13.0037653229758,18.8644173589578,12.0377304968487,7.90652579663893,12.889106622201,15.4681788628637,9.96748457593388,13.7016503954128,16.6186657425734,12.8254275044043,14.8605997063993,13.5942722695261,14.497288729051,5.70830411712972,10.7736715818278,8.87814749921498,11.1829089851415,5.03071590307158,6.43452279575049,10.8900896622791,12.3621034343337,12.5158491740808,9.34979683526051,15.4622372933046,12.0720858487089,13.8589431055426,13.9574832242615,12.2337548875456,12.3836359733599,10.6613579869267,14.4681915347779,9.47797571847605,12.6591071315582,10.9718160763333,12.2458306249943,12.8755542571553,11.046327664057,11.104906889009,11.5922012811597,11.5244622909847,14.4688341290814,11.5433496768983,11.2228454331548,12.931216975535,9.85044823755635,13.5046244245997,12.2400104536913,11.1885834369062,7.24450676020043,12.1644436391612,7.09074478359384,12.6250299165437,7.72069966918304,8.57910991795559
|short_description=p1@Scaper
}}
}}

Revision as of 03:17, 19 April 2012

Short description:p1@Scaper
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scaper_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_001081341, uc009pso.1, uc009psp.1, uc012gtu.1_5end
EntrezGene:Scaper
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scaper

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I38.17
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.14
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.34
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.87
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.41
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.83
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A422.21
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B95.51
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G822.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H321.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G919.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H420.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.42
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.90
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D93.33
Mouse Schwann, donor2.CNhs12573.11746-123F95.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.20
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.76
accessory axillary lymph node, adult.CNhs10475.1063-29H940.91
adrenal gland, adult.CNhs10508.49-24D710.54
adrenal gland, embryo E14.CNhs11038.406-44C55.38
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F53.92
adrenal gland, neonate N00.CNhs11191.1311-23C18.94
adrenal gland, neonate N25.CNhs11223.1377-27I36.53
amnion, adult pregnant day17.5.CNhs10488.583-22A812.61
aorta, adult.CNhs10498.46-23H115.62
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F58.90
bone (os femoris), neonate N16.CNhs11225.1525-43A67.73
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B220.20
cerebellum, neonate N30.CNhs11135.1395-42I220.74
colon, adult.CNhs10468.36-18H76.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A418.72
corpus striatum, adult.CNhs10487.19-21D819.67
corpus striatum, neonate N00.CNhs11226.630-43F110.93
cortex, adult.CNhs10473.12-14D517.73
cortex, neonate N30.CNhs11107.1392-42F214.83
diencephalon, adult.CNhs10482.20-12F216.83
diencephalon, neonate N30.CNhs11201.1388-42B214.28
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.96
epididymis, adult.CNhs10490.58-23B210.36
eyeball, adult.CNhs10484.31-12G411.36
eyeball, embryo E12.CNhs11016.345-16C68.98
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C911.70
eyeball, embryo E17.CNhs11023.1261-18D414.02
eyeball, neonate N00.CNhs11207.633-15C612.31
eyeball, neonate N01.CNhs11140.1532-43E714.35
eyeball, neonate N02.CNhs11205.1551-44G811.71
eyeball, neonate N16.CNhs11188.777-19A215.26
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H210.97
forelimb, embryo E13.CNhs10589.384-1E216.36
forelimb, embryo E14.CNhs10577.413-26A89.64
forelimb, embryo E15.CNhs11007.437-20E715.01
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B517.90
gonad, embryo E13.CNhs11044.1564-45I68.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E96.84
heart, embryo E12.CNhs11015.353-12F57.04
heart, embryo E13.CNhs11013.376-3I910.08
heart, embryo E14.CNhs10597.403-26D410.65
heart, embryo E15.CNhs11017.431-16C89.84
heart, embryo E16.CNhs11021.457-17C612.19
heart, embryo E17.CNhs11025.479-18E58.14
heart, embryo E18.CNhs11030.1283-20G39.12
heart, neonate N00.CNhs11213.639-21E312.84
heart, neonate N03.CNhs11221.1349-25I29.38
heart, neonate N10.CNhs11118.749-24G111.82
heart, neonate N16.CNhs11209.782-15G111.51
heart, neonate N20.CNhs11127.821-26I611.26
heart, neonate N25.CNhs11196.1351-25D310.32
heart, neonate N30.CNhs11202.1390-42D211.41
hippocampus, adult.CNhs10478.13-16E819.35
hippocampus, neonate N00.CNhs11228.627-43G116.98
intestinal mucosa, adult.CNhs10506.860-29I312.56
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D510.22
intestine, embryo E15.CNhs10602.976-16D88.89
intestine, embryo E16.CNhs10585.463-22H47.87
intestine, embryo E17.CNhs10582.482-18D38.23
intestine, embryo E18.CNhs10526.1289-20F78.56
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E97.08
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F212.34
intestine, neonate N10.CNhs11098.755-23A58.38
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E37.56
intestine, neonate N30.CNhs11131.1384-42G18.16
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F87.65
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I28.96
kidney, embryo E18.CNhs11001.1288-20C78.92
kidney, neonate N00.CNhs11214.646-21G711.08
kidney, neonate N10.CNhs11206.758-6D511.64
kidney, neonate N20.CNhs11113.832-19I110.92
kidney, neonate N25.CNhs11122.1353-25F311.30
kidney, neonate N30.CNhs11203.1385-42H17.77
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H65.11
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F46.65
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B910.92
liver, neonate N20.CNhs11220.823-25A36.06
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B112.93
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F88.47
lung, embryo E15.CNhs11020.432-17C56.62
lung, embryo E16.CNhs10998.458-17B69.15
lung, embryo E17.CNhs10605.480-44A611.39
lung, embryo E18.CNhs10583.1287-20I613.81
lung, neonate N00.CNhs11224.640-42C67.61
lung, neonate N06.CNhs11212.683-20E514.66
lung, neonate N07.CNhs11111.715-19A313.73
lung, neonate N10.CNhs11219.750-23E611.16
lung, neonate N20.CNhs11109.822-18A414.09
lung, neonate N25.CNhs11119.1359-25C714.33
lung, neonate N30.CNhs11133.1394-42H212.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H29.38
medulla oblongata, adult.CNhs10477.17-12C213.17
medulla oblongata, neonate N30.CNhs11200.1396-42A316.06
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.51
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I712.63
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I411.56
oviduct, adult pregnant day01.CNhs10500.988-6G615.34
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E57.92
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D711.27
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B610.75
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G826.21
pituitary gland, embryo E12.CNhs11018.346-16E68.10
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B910.46
pituitary gland, embryo E16.CNhs11036.449-43F69.63
pituitary gland, embryo E17.CNhs11039.1265-44F511.68
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I79.86
placenta, adult pregnant day17.CNhs10464.577-18G312.92
prostate, adult.CNhs10470.859-1F87.94
skin, adult.CNhs10492.30-1C316.49
skin, neonate N00.CNhs11124.650-25G415.82
skin, neonate N03.CNhs11215.662-22H313.69
skin, neonate N06.CNhs11097.693-20I513.25
skin, neonate N10.CNhs11108.762-6C415.10
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C916.32
spleen, adult.CNhs10465.25-2G210.08
spleen, embryo E16.CNhs11035.461-43C17.43
spleen, embryo E18.CNhs11011.1271-21F28.89
spleen, neonate N10.CNhs11116.752-24D15.09
spleen, neonate N20.CNhs11112.824-19H16.97
spleen, neonate N25.CNhs11099.1354-25G36.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.36
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E36.64
stomach, embryo E15.CNhs10603.1252-16G810.57
stomach, embryo E16.CNhs11022.459-17D49.61
stomach, embryo E17.CNhs11006.1035-18D513.38
stomach, embryo E18.CNhs10999.1286-20C69.39
stomach, neonate N03.CNhs11193.1340-24B88.36
stomach, neonate N07.CNhs11210.718-18A912.15
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I112.57
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F59.27
testis, embryo E15.CNhs11034.443-27C55.63
testis, embryo E16.CNhs11033.470-26G512.25
testis, embryo E17.CNhs11029.486-18I59.43
testis, embryo E18.CNhs11027.503-18G59.97
testis, neonate N00.CNhs11189.1300-22B716.78
testis, neonate N07.CNhs11222.726-26I413.93
testis, neonate N10.CNhs11204.763-44D921.50
testis, neonate N20.CNhs11110.839-18H315.94
testis, neonate N30.CNhs11130.1391-42E212.10
thymus, adult.CNhs10471.38-12B510.11
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I27.50
thymus, embryo E16.CNhs11002.456-26C55.85
thymus, embryo E17.CNhs10581.478-18C19.13
thymus, embryo E18.CNhs10595.1273-19G47.95
thymus, neonate N02.CNhs11181.1541-43F87.81
thymus, neonate N03.CNhs11137.2104-43C77.83
thymus, neonate N06.CNhs11197.681-26C413.02
thymus, neonate N07.CNhs11211.713-19D39.75
thymus, neonate N10.CNhs11194.748-24E49.18
thymus, neonate N20.CNhs11186.820-7A210.14
thymus, neonate N25.CNhs11125.1362-25G711.74
thymus, neonate N30.CNhs11132.1393-42G29.47
tongue, adult.CNhs10499.32-1B412.02
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.04
urinary bladder, adult.CNhs10481.879-12E414.68
uterus, adult pregnant day19.CNhs10497.590-15F510.32
uterus, adult.CNhs10509.92-27E513.00
vagina, adult.CNhs10502.89-27D518.86
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A516.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I85.71
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H28.88
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F26.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.46
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.86
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.66
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.25
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.10
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.24
whole body, embryo E17.5.CNhs10513.490-9F911.19
whole body, embryo E17.CNhs10517.475-3I57.24
whole body, embryo E18.CNhs10516.493-3B312.16
whole body, neonate N00.CNhs10525.657-19C27.09
whole body, neonate N01.CNhs10576.659-23C612.63
whole body, neonate N06.CNhs10515.692-21D17.72
whole body, neonate N10.CNhs10518.761-6B48.58





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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