FF:11284-116I6: Difference between revisions

Revision as of 20:28, 9 July 2012

Name:	Smooth Muscle Cells - Brachiocephalic, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	brachiocephalic artery
dev stage	NA
sex	unknown
age	NA
cell type	smooth muscle cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	2463
catalog number	custom
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.219
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.324
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.361
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.293
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.69
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.455
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.19
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.174
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.285
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.0802
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.325
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.35
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0738
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.556
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.0738
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.721
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	1.034
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.325
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.361
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11086

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.451
MA0003.1	MA0003.1	0.23
MA0004.1	MA0004.1	0.259
MA0006.1	MA0006.1	0.149
MA0007.1	MA0007.1	0.909
MA0009.1	MA0009.1	0.41
MA0014.1	MA0014.1	0.747
MA0017.1	MA0017.1	0.696
MA0018.2	MA0018.2	0.00156
MA0019.1	MA0019.1	0.171
MA0024.1	MA0024.1	3.2845e-9
MA0025.1	MA0025.1	0.798
MA0027.1	MA0027.1	0.625
MA0028.1	MA0028.1	0.526
MA0029.1	MA0029.1	0.302
MA0030.1	MA0030.1	0.598
MA0031.1	MA0031.1	0.104
MA0035.2	MA0035.2	0.369
MA0038.1	MA0038.1	0.0485
MA0039.2	MA0039.2	0.409
MA0040.1	MA0040.1	0.35
MA0041.1	MA0041.1	0.284
MA0042.1	MA0042.1	0.692
MA0043.1	MA0043.1	0.0478
MA0046.1	MA0046.1	0.738
MA0047.2	MA0047.2	0.299
MA0048.1	MA0048.1	0.309
MA0050.1	MA0050.1	2.10305e-6
MA0051.1	MA0051.1	0.0173
MA0052.1	MA0052.1	0.958
MA0055.1	MA0055.1	0.899
MA0057.1	MA0057.1	0.291
MA0058.1	MA0058.1	0.103
MA0059.1	MA0059.1	0.528
MA0060.1	MA0060.1	8.38906e-6
MA0061.1	MA0061.1	0.615
MA0062.2	MA0062.2	0.0385
MA0065.2	MA0065.2	0.762
MA0066.1	MA0066.1	0.214
MA0067.1	MA0067.1	0.00367
MA0068.1	MA0068.1	0.914
MA0069.1	MA0069.1	0.243
MA0070.1	MA0070.1	0.765
MA0071.1	MA0071.1	0.947
MA0072.1	MA0072.1	0.645
MA0073.1	MA0073.1	0.823
MA0074.1	MA0074.1	0.411
MA0076.1	MA0076.1	0.339
MA0077.1	MA0077.1	0.0181
MA0078.1	MA0078.1	0.0564
MA0079.2	MA0079.2	0.451
MA0080.2	MA0080.2	0.00178
MA0081.1	MA0081.1	0.152
MA0083.1	MA0083.1	4.58892e-6
MA0084.1	MA0084.1	0.303
MA0087.1	MA0087.1	0.324
MA0088.1	MA0088.1	0.488
MA0090.1	MA0090.1	0.00243
MA0091.1	MA0091.1	0.193
MA0092.1	MA0092.1	0.123
MA0093.1	MA0093.1	0.265
MA0099.2	MA0099.2	5.56335e-12
MA0100.1	MA0100.1	0.13
MA0101.1	MA0101.1	0.623
MA0102.2	MA0102.2	0.242
MA0103.1	MA0103.1	0.115
MA0104.2	MA0104.2	0.201
MA0105.1	MA0105.1	0.479
MA0106.1	MA0106.1	0.118
MA0107.1	MA0107.1	0.542
MA0108.2	MA0108.2	3.83048e-4
MA0111.1	MA0111.1	0.0184
MA0112.2	MA0112.2	0.0222
MA0113.1	MA0113.1	0.936
MA0114.1	MA0114.1	0.798
MA0115.1	MA0115.1	0.459
MA0116.1	MA0116.1	0.38
MA0117.1	MA0117.1	0.508
MA0119.1	MA0119.1	0.195
MA0122.1	MA0122.1	0.799
MA0124.1	MA0124.1	0.744
MA0125.1	MA0125.1	0.977
MA0131.1	MA0131.1	0.558
MA0135.1	MA0135.1	0.931
MA0136.1	MA0136.1	0.0742
MA0137.2	MA0137.2	0.122
MA0138.2	MA0138.2	0.597
MA0139.1	MA0139.1	0.785
MA0140.1	MA0140.1	0.706
MA0141.1	MA0141.1	0.452
MA0142.1	MA0142.1	0.963
MA0143.1	MA0143.1	0.786
MA0144.1	MA0144.1	0.633
MA0145.1	MA0145.1	0.168
MA0146.1	MA0146.1	0.48
MA0147.1	MA0147.1	0.537
MA0148.1	MA0148.1	0.319
MA0149.1	MA0149.1	0.972
MA0150.1	MA0150.1	0.261
MA0152.1	MA0152.1	0.281
MA0153.1	MA0153.1	0.768
MA0154.1	MA0154.1	0.256
MA0155.1	MA0155.1	0.0292
MA0156.1	MA0156.1	0.746
MA0157.1	MA0157.1	0.547
MA0159.1	MA0159.1	0.421
MA0160.1	MA0160.1	0.868
MA0162.1	MA0162.1	0.0354
MA0163.1	MA0163.1	0.0113
MA0164.1	MA0164.1	0.555
MA0258.1	MA0258.1	0.182
MA0259.1	MA0259.1	0.615

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11086

Novel motif	Logo	P-value
1	1	0.811
10	10	0.326
100	100	0.496
101	101	0.731
102	102	0.79
103	103	0.196
104	104	0.406
105	105	0.967
106	106	0.0173
107	107	0.0311
108	108	0.842
109	109	0.127
11	11	0.109
110	110	0.325
111	111	0.871
112	112	0.704
113	113	0.109
114	114	0.157
115	115	0.306
116	116	0.052
117	117	0.789
118	118	0.992
119	119	0.537
12	12	0.797
120	120	0.16
121	121	0.783
122	122	0.849
123	123	0.014
124	124	0.602
125	125	0.294
126	126	0.743
127	127	0.636
128	128	0.0891
129	129	0.995
13	13	0.538
130	130	0.303
131	131	0.185
132	132	0.774
133	133	0.725
134	134	0.177
135	135	0.0133
136	136	0.991
137	137	0.502
138	138	0.21
139	139	0.174
14	14	0.582
140	140	0.845
141	141	0.233
142	142	0.704
143	143	0.00659
144	144	0.752
145	145	0.142
146	146	0.845
147	147	0.127
148	148	0.834
149	149	0.0111
15	15	0.69
150	150	0.153
151	151	0.468
152	152	0.00939
153	153	0.925
154	154	0.769
155	155	0.0853
156	156	0.868
157	157	0.786
158	158	0.0129
159	159	0.33
16	16	0.193
160	160	0.145
161	161	0.756
162	162	0.796
163	163	0.996
164	164	0.46
165	165	0.439
166	166	0.554
167	167	0.624
168	168	0.433
169	169	0.0867
17	17	0.257
18	18	0.0599
19	19	0.0519
2	2	0.193
20	20	0.36
21	21	0.369
22	22	0.188
23	23	0.0534
24	24	0.204
25	25	0.376
26	26	0.468
27	27	0.635
28	28	0.164
29	29	0.547
3	3	0.586
30	30	0.339
31	31	0.561
32	32	5.07616e-5
33	33	0.865
34	34	0.286
35	35	0.514
36	36	0.354
37	37	0.0978
38	38	0.813
39	39	0.301
4	4	0.703
40	40	0.626
41	41	0.553
42	42	0.711
43	43	0.324
44	44	0.437
45	45	0.188
46	46	0.167
47	47	0.61
48	48	0.379
49	49	0.817
5	5	0.675
50	50	0.335
51	51	0.813
52	52	0.691
53	53	0.48
54	54	0.462
55	55	0.272
56	56	0.551
57	57	0.614
58	58	0.698
59	59	0.0824
6	6	0.922
60	60	0.645
61	61	0.774
62	62	0.75
63	63	0.162
64	64	0.87
65	65	0.247
66	66	0.964
67	67	0.257
68	68	0.451
69	69	0.794
7	7	0.761
70	70	0.0502
71	71	0.353
72	72	0.802
73	73	0.00626
74	74	0.864
75	75	0.527
76	76	0.881
77	77	0.00603
78	78	0.925
79	79	0.0584
8	8	0.213
80	80	0.316
81	81	0.547
82	82	0.478
83	83	0.694
84	84	0.862
85	85	0.033
86	86	0.368
87	87	0.0163
88	88	0.0604
89	89	0.0322
9	9	0.206
90	90	0.563
91	91	0.717
92	92	0.36
93	93	0.974
94	94	0.744
95	95	0.253
96	96	0.908
97	97	0.569
98	98	0.689
99	99	0.00524

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11086

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000169 human smooth muscle cell of the brachiocephalic vasculature sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0000359 (vascular associated smooth muscle cell)
0002589 (smooth muscle cell of the brachiocephalic vasculature)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001637 (artery)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0004573 (systemic artery)
0003509 (arterial blood vessel)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0001529 (brachiocephalic artery)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0007204 (brachiocephalic vasculature)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000167 (smooth muscle cell sample)
0000169 (human smooth muscle cell of the brachiocephalic vasculature sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000514 (smooth muscle myoblast)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!1.98!95.44!SOX17;;chr11:34642612..34642646,+!p1@EHF!1.44!26.32!EHF;;chr11:46299199..46299233,+!p1@CREB3L1!1.38!114.72!CREB3L1;;chr6:34204921..34204939,+!p3@HMGA1!1.35!619.35!HMGA1;;chr10:94449703..94449718,+!p1@HHEX!1.32!75.98!HHEX;;chr18:53068911..53068935,-!p4@TCF4!1.32!22.61!TCF4;;chr20:6748325..6748352,+!p1@BMP2!1.20!21.50!BMP2;;chr11:65686802..65686818,+!p6@DRAP1!1.19!25.02!DRAP1;;chr1:170632285..170632309,+!p1@PRRX1!1.19!16.31!PRRX1;;chr11:65687362..65687436,+!p3@DRAP1!1.13!56.52!DRAP1;;chr12:53614115..53614154,-!p1@RARG!1.11!63.75!RARG;;chr4:174450089..174450153,-!p2@HAND2!1.09!11.30!HAND2;;chr19:13136130..13136165,+!p6@NFIX!1.07!14.27!NFIX;;chr9:35732647..35732678,+!p2@CREB3!1.06!59.12!CREB3;;chr11:46299539..46299620,+!p2@CREB3L1!1.06!17.79!CREB3L1;;chr15:67458491..67458505,+!p18@SMAD3!1.04!10.01!SMAD3;;chr6:10415276..10415341,-!p2@TFAP2A!0.99!10.75!TFAP2A;;chr3:141087393..141087426,+!p3@ZBTB38!0.98!34.66!ZBTB38;;chr16:86600426..86600441,+!p1@FOXC2!0.96!20.76!FOXC2;;chr4:174451370..174451387,-!p1@HAND2!0.96!8.15!HAND2;;chr11:65686732..65686756,+!p2@DRAP1!0.95!34.66!DRAP1;;chr6:10412600..10412637,-!p1@TFAP2A!0.94!13.16!TFAP2A;;chr19:13134772..13134822,+!p2@NFIX!0.94!11.49!NFIX;;chr2:239756671..239756732,+!p1@TWIST2!0.93!24.83!TWIST2;;chr9:35732514..35732530,+!p5@CREB3!0.93!10.93!CREB3;;chr7:1577899..1577943,+!p3@MAFK!0.92!7.23!MAFK;;chr1:151032860..151032918,+!p1@MLLT11!0.91!89.14!MLLT11;;chr12:66218598..66218645,+!p2@HMGA2!0.91!34.66!HMGA2;;chr2:239756739..239756755,+!p2@TWIST2!0.91!12.42!TWIST2;;chr1:170633348..170633399,+!p2@PRRX1!0.91!9.82!PRRX1;;chr12:66218255..66218304,+!p3@HMGA2!0.89!18.90!HMGA2;;chr1:170633262..170633285,+!p3@PRRX1!0.86!7.23!PRRX1;;chr7:44143925..44143970,+!p1@AEBP1!0.85!143.44!AEBP1;;chr1:37940170..37940190,+!p1@ZC3H12A!0.85!80.06!ZC3H12A;;chr12:124873357..124873401,-!p1@NCOR2!0.85!75.43!NCOR2;;chr19:42636586..42636607,-!p1@POU2F2!0.84!17.42!POU2F2;;chr9:132427972..132428056,+!p1@PRRX2!0.83!7.60!PRRX2;;chr12:66218836..66218888,+!p1@HMGA2!0.82!56.52!HMGA2;;chrY:21906594..21906622,-!p1@KDM5D!0.82!5.56!KDM5D;;chr6:34204973..34204990,+!p4@HMGA1!0.80!76.35!HMGA1;;chr1:151032922..151032951,+!p2@MLLT11!0.80!9.08!MLLT11;;chr12:80085061..80085119,-!p6@PAWR!0.80!8.71!PAWR;;chr1:170632115..170632136,+!p9@PRRX1!0.80!5.37!PRRX1;;chr19:13134457..13134462,+!p5@NFIX!0.79!9.64!NFIX;;chr3:141087562..141087594,+!p12@ZBTB38!0.79!5.19!ZBTB38;;chr11:65667884..65667895,-!p2@FOSL1!0.78!20.94!FOSL1;;chr17:3571863..3571881,-!p1@TAX1BP3!0.77!383.44!TAX1BP3;;chr11:65687158..65687216,+!p4@DRAP1!0.76!29.65!DRAP1;;chr7:44143978..44143989,+!p2@AEBP1!0.75!8.90!AEBP1;;chr3:25469815..25469866,+!p3@RARB!0.75!4.63!RARB;;chr3:25470156..25470227,+!p2@RARB!0.75!4.63!RARB;;chr1:170632477..170632506,+!p6@PRRX1!0.75!4.63!PRRX1;;chr6:34204672..34204692,+!p1@HMGA1!0.73!550.97!HMGA1;;chr11:65687222..65687240,+!p7@DRAP1!0.73!5.75!DRAP1;;chr19:45260775..45260838,+!p5@BCL3!0.72!5.75!BCL3;;chr1:170632250..170632277,+!p7@PRRX1!0.72!4.26!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!0.72!4.26!PRRX1;;chr21:38071430..38071456,+!p1@SIM2!0.72!4.26!SIM2;;chr12:66218904..66218913,+!p11@HMGA2!0.72!4.26!HMGA2;;chr1:170632959..170632987,+!p4@PRRX1!0.71!4.63!PRRX1;;chr20:30433396..30433414,-!p1@FOXS1!0.71!4.08!FOXS1;;chr11:65667846..65667868,-!p1@FOSL1!0.70!121.76!FOSL1;;chr9:35732592..35732640,+!p1@CREB3!0.69!58.56!CREB3;;chr20:42543441..42543497,+!p1@TOX2!0.69!19.64!TOX2;;chr8:55370720..55370733,+!p2@SOX17!0.69!3.89!SOX17;;chr15:67458861..67458879,+!p17@SMAD3!0.69!3.89!SMAD3;;chr12:124873852..124873881,-!p3@NCOR2!0.68!26.32!NCOR2;;chr22:38598086..38598105,+!p1@MAFF!0.67!45.59!MAFF;;chr19:13136057..13136085,+!p11@NFIX!0.67!3.71!NFIX;;chr12:125002827..125002855,-!p5@NCOR2!0.66!5.37!NCOR2;;chr11:46299443..46299459,+!p4@CREB3L1!0.66!3.52!CREB3L1;;chr19:13135582..13135600,+!p3@NFIX!0.66!3.52!NFIX;;chr10:94449675..94449694,+!p2@HHEX!0.65!10.56!HHEX;;chr3:25469724..25469773,+!p1@RARB!0.64!5.19!RARB;;chr11:65687243..65687276,+!p8@DRAP1!0.64!4.82!DRAP1;;chr20:48599506..48599526,+!p1@SNAI1!0.62!24.28!SNAI1;;chr18:19749541..19749557,+!p1@GATA6!0.62!11.30!GATA6;;chr7:44143997..44144008,+!p3@AEBP1!0.62!4.26!AEBP1;;chr2:172950227..172950249,+!p2@DLX1!0.62!3.15!DLX1;;chrY:2803415..2803468,+!p1@ZFY!0.62!3.15!ZFY;;chr1:170632723..170632739,+!p8@PRRX1!0.62!3.15!PRRX1;;chr19:45908292..45908374,-!p1@PPP1R13L!0.61!32.80!PPP1R13L;;chr15:67418119..67418162,+!p5@SMAD3!0.61!3.52!SMAD3;;chr1:8938709..8938720,-!p3@ENO1!0.60!176.06!ENO1;;chr3:52001396..52001425,-!p4@PCBP4!0.60!5.93!PCBP4;;chr16:54320158..54320200,-!p5@IRX3!0.60!4.63!IRX3;;chr12:80085120..80085156,-!p14@PAWR!0.60!2.97!PAWR;;chr11:46299186..46299195,+!p3@CREB3L1!0.59!3.34!CREB3L1;;chr15:67418047..67418093,+!p4@SMAD3!0.58!3.71!SMAD3;;chr11:34642656..34642667,+!p2@EHF!0.58!2.78!EHF;;chr19:13106214..13106382,+!p1@NFIX!0.57!78.21!NFIX;;chr12:115121962..115121987,-!p1@TBX3!0.57!27.80!TBX3;;chr9:4300050..4300118,-!p1@GLIS3!0.57!21.87!GLIS3;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+|ffid_belonging_in_development=CL:0000355,CL:0000222,CL:0000514
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11284-116I6: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:28, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0