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MacroAPE 1083:HNF6 f1: Difference between revisions

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827-111C8;0.0743733!10789-110H6;0.609768!10828-111C9;0.636039!10788-110H5;0.731288!10792-110H9;0.38525!10765-110E9;0.979437!10829-111D1;0.473716!10830-111D2;0.793564!10831-111D3;0.7122!10832-111D4;0.722576!10833-111D5;0.282635!10764-110E8;0.456607!10770-110F5;0.747525!10399-106A3;0.257606!10400-106A4;0.786852!10405-106A9;0.840873!10834-111D6;0.903535!10835-111D7;0.336136!10836-111D8;0.474579!10837-111D9;0.571283!10699-109G6;0.820327!10802-111A1;0.66263!10796-110I4;0.919872!10010-101C1;0.746282!10810-111A9;0.0839227!10421-106C7;0.619505!10708-109H6;0.197002!12235-129G3;0.953139!12236-129G4;0.378979!12237-129G5;0.197079!10167-103B5;0.278049!10151-102I7;0.841664!10428-106D5;0.93611!10795-110I3;0.421274!10805-111A4;0.48482!10052-101G7;0.81923!10189-103D9;0.575987!10589-108D4;0.0811214!10425-106D2;0.428607!10427-106D4;0.616778!10702-109G9;0.372759!10432-106D9;0.289047!10496-107C1;0.111061!10718-109I7;0.815176!10011-101C2;0.39199!10053-101G8;0.746195!10686-109F2;0.950794!10084-102B3;0.729051!10012-101C3;0.823475!10085-102B4;0.874728!10482-107A5;0.725446!10419-106C5;0.464525!10080-102A8;0.733866!10760-110E4;0.294439!10709-109H7;0.0777479!10710-109H8;0.39729!10703-109H1;0.993776!10719-109I8;0.220768!10642-109A3;0.998994!10177-103C6;0.085253!10164-103B2;0.863562!10173-103C2;0.703557!10166-103B4;0.418839!10083-102B2;0.474923!10188-103D8;0.358435!10552-107I3;0.947614!10553-107I4;0.298438!10013-101C4;0.344133!10536-107G5;0.754728!10618-108G6;0.227402!10423-106C9;0.195584!10785-110H2;0.634599!12238-129G6;0.524182!12239-129G7;0.185083!12240-129G8;0.491849!10416-106C2;0.194807!10801-110I9;0.189797!10766-110F1;0.973325!10824-111C5;0.851986!10825-111C6;0.994718!10826-111C7;0.944249!10454-106G4;0.932394!10409-106B4;0.945978!10638-108I8;0.916452!10636-108I6;0.808425!10513-107D9;0.0823135!10420-106C6;0.535274!10082-102B1;0.208667!10014-101C5;0.831875!10070-101I7;0.987859!10452-106G2;0.453464!10453-106G3;0.661883!10449-106F8;0.567616!10042-101F6;0.691501!10069-101I6;0.9411!10193-103E4;0.152111!10631-108I1;0.849575!10438-106E6;0.724177!10488-107B2;0.432142!10196-103E7;0.907839!10071-101I8;0.91425!10071-101I8;0.219552!10041-101F5;0.441502!10451-106G1;0.878292!10450-106F9;0.453227!10604-108F1;0.639953!10605-108F2;0.023049!10606-108F3;0.0842026!10603-108E9;0.0206475!10497-107C2;0.185612!10448-106F7;0.826387!10643-109A4;0.493697!10426-106D3;0.0880594!10431-106D8;0.0562784!10197-103E8;0.690681!10443-106F2;0.522806!10815-111B5;0.489933!10816-111B6;0.261659!10817-111B7;0.281165!10015-101C6;0.220926!10410-106B5;0.284837!10054-101G9;0.43286!10758-110E2;0.492817!10711-109H9;0.972918!10040-101F4;0.586818!10470-106I2;0.744947!10415-106C1;0.0703444!10198-103E9;0.156076!10614-108G2;0.848959!10612-108F9;0.0529349!10549-107H9;0.689347!10615-108G3;0.324428!10487-107B1;0.835679!10433-106E1;0.583866!10688-109F4;0.534762!10444-106F3;0.205471!10444-106F3;0.966632!10485-107A8;0.745989!10413-106B8;0.63216!10175-103C4;0.321427!10161-103A8;0.329032!12131-128D7;0.392649!10624-108H3;0.837562!10712-109I1;0.277825!10205-103F7;0.559925!10206-103F8;0.0427301!10207-103F9;0.0889582!10050-101G5;0.144346!10051-101G6;0.0250069!10016-101C7;0.0988572!10046-101G1;0.0303766!10778-110G4;0.32537!10633-108I3;0.189374!10818-111B8;0.865088!10819-111B9;0.0696835!10820-111C1;0.0637429!10484-107A7;0.0790385!10808-111A7;0.849157!10169-103B7;0.280706!10153-102I9;0.793435!13425-144D5;0.90484!13433-144E4;0.185961!13437-144E8;0.0886037!11904-125F5;0.0971035!11905-125F6;0.782368!10039-101F3;0.641425!10791-110H8;0.908239!10017-101C8;0.457896!10045-101F9;0.492836!10509-107D5;0.349254!10839-111E2;0.837978!10692-109F8;0.699361!10079-102A7;0.247817!10078-102A6;0.0651722!10721-110A1;0.0724969!10569-108B2;0.713021!10570-108B3;0.591921!10571-108B4;0.307629!10647-109A8;0.579429!10752-110D5;0.578698!10782-110G8;0.636437!10726-110A6;0.112422!10018-101C9;0.876379!10086-102B5;0.499733!10182-103D2;0.339034!10165-103B3;0.393551!10499-107C4;0.624311!10408-106B3;0.144306!10019-101D1;0.422852!10068-101I5;0.239486!10075-102A3;0.844855!10077-102A5;0.199098!10727-110A7;0.0905138!10775-110G1;0.420048!10412-106B7;0.57427!12231-129F8;0.00522472!12232-129F9;0.0607137!12233-129G1;0.0244935!12234-129G2;0.0398415!10414-106B9;0.028449!10170-103B8;0.567465!10183-103D3;0.385506!10150-102I6;0.806424!10174-103C3;0.630238!10155-103A2;0.648674!10038-101F2;0.546867!10838-111E1;0.721785!10759-110E3;0.851944!10514-107E1;0.800448!10465-106H6;0.941927!10691-109F7;0.659181!10843-111E6;0.526569!10844-111E7;0.637665!11747-123G1;0.158829!11748-123G2;0.266507!11749-123G3;0.393944!11750-123G4;0.826238!11751-123G5;0.24394!11840-124H4;0.862158!11752-123G6;0.577121!11753-123G7;0.997217!11754-123G8;0.826588!11755-123G9;0.0924825!11756-123H1;0.067722!11833-124G6;0.161867!11760-123H5;0.956785!11836-124G9;0.123519!11758-123H3;0.520622!11835-124G8;0.287164!11762-123H7;0.352664!11838-124H2;0.137554!11757-123H2;0.613604!11759-123H4;0.104236!11761-123H6;0.0906408!11842-124H6;0.107836!11837-124H1;0.916048!10568-108B1;0.470414!13230-141I8;0.78703!13231-141I9;0.260963!10696-109G3;0.423303!10493-107B7;0.570059!10494-107B8;0.26408!10850-111F4;0.607109!10851-111F5;0.777507!10852-111F6;0.807334!10853-111F7;0.250191!10854-111F8;0.148921!10855-111F9;0.787418!10856-111G1;0.243289!10847-111F1;0.79181!10846-111E9;0.224097!10848-111F2;0.572441!10845-111E8;0.229303!10857-111G2;0.205505!10858-111G3;0.992154!10156-103A3;0.668646!11901-125F2;0.594971!11902-125F3;0.731869!11903-125F4;0.707526!10689-109F5;0.761629!10648-109A9;0.275103!10784-110H1;0.597433!10744-110C6;0.395302!10772-110F7;0.388646!10474-106I6;0.635405!10600-108E6;0.198791!10684-109E9;0.923843!12226-129F3;0.459244!12227-129F4;0.451194!10508-107D4;0.973933!10539-107G8;0.633356!10607-108F4;0.119202!10555-107I6;0.942967!10774-110F9;0.445348!10637-108I7;0.240566!10663-109C6;0.9095!10728-110A8;0.664942!10729-110A9;0.681126!10430-106D7;0.348755!10730-110B1;0.606745!10813-111B3;0.162653!10812-111B2;0.921196!10037-101F1;0.188131!10172-103C1;0.721666!10163-103B1;0.58169!10076-102A4;0.600345!10073-102A1;0.878725!10036-101E9;0.416437!10195-103E6;0.715396!10277-104E7;0.756796!10434-106E2;0.764437!10550-107I1;0.970296!10545-107H5;0.344607!10544-107H4;0.378466!10704-109H2;0.0421596!10510-107D6;0.883144!10558-107I9;0.25171!10020-101D2;0.169345!10732-110B3;0.362634!10049-101G4;0.226652!10698-109G5;0.504256!10437-106E5;0.275005!10417-106C3;0.230802!10035-101E8;0.233717!10171-103B9;0.619024!10157-103A4;0.525682!10034-101E7;0.624873!10072-101I9;0.742478!10199-103F1;0.124546!10200-103F2;0.0758665!10697-109G4;0.0809701!10723-110A3;0.75123!10179-103C8;0.0913054!10160-103A7;0.316446!10180-103C9;0.219819!10162-103A9;0.669436!10021-101D3;0.267508!10840-111E3;0.798923!10706-109H4;0.71421!10033-101E6;0.526385!10032-101E5;0.365696!10490-107B4;0.769542!10439-106E7;0.110232!10022-101D4;0.214509!10176-103C5;0.624546!10469-106I1;0.50247!10067-101I4;0.381493!10411-106B6;0.523531!10471-106I3;0.859567!10030-101E3;0.991127!10475-106I7;0.913409!10787-110H4;0.521558!10477-106I9;0.566235!10695-109G2;0.042844!11771-123I7;0.60486!11772-123I8;0.12513!11773-123I9;0.165868!10093-102C3;0.237053!10442-106F1;0.596788!10442-106F1;0.827911!10201-103F3;0.731593!10639-108I9;0.984003!11843-124H7;0.16862!11841-124H5;0.562954!10693-109F9;0.645776!10436-106E4;0.656331!10483-107A6;0.812874!10282-104F3;0.64257!10023-101D5;0.125137!10066-101I3;0.100507!10065-101I2;0.358902!10800-110I8;0.348213!10610-108F7;0.244507!10841-111E4;0.240267!10541-107H1;0.370263!10842-111E5;0.249448!10562-108A4;0.520935!10024-101D6;0.994616!10064-101I1;0.430289!10609-108F6;0.165273!10048-101G3;0.935012!10781-110G7;0.581666!10181-103D1;0.00249061!10159-103A6;0.679021!10056-101H2;0.762417!10737-110B8;0.58631!10025-101D7;0.76006!10044-101F8;0.164906!10424-106D1;0.331509!10463-106H4;0.983415!10616-108G4;0.257763!10486-107A9;0.0339997!10062-101H8;0.396082!10202-103F4;0.447744!10158-103A5;0.000890242!10441-106E9;0.961526!10031-101E4;0.369138!10063-101H9;0.97534!10063-101H9;0.391711!11763-123H8;0.27242!11765-123I1;0.12428!11768-123I4;0.391146!10807-111A6;0.533542!10790-110H7;6.17797e-05!10798-110I6;0.129946!10786-110H3;0.232516!10591-108D6;0.334933!10593-108D8;0.113033!10590-108D5;0.114668!10026-101D8;0.80235!10096-102C6;0.0797731!10168-103B6;0.129099!10154-103A1;0.685053!10209-103G2;0.833557!10061-101H7;0.113585!10027-101D9;0.262653!10043-101F7;0.447904!10783-110G9;0.452661!10028-101E1;0.717901!10060-101H6;0.0653037!10203-103F5;0.190932!10059-101H5;0.0746437!10047-101G2;0.458973!10029-101E2;0.097072!10058-101H4;0.615409!10418-106C4;0.583114!10492-107B6;0.0208788!10694-109G1;0.246635!10797-110I5;0.843536!10057-101H3;0.146003!10100-102D1;0.589123!10055-101H1;0.367286!10204-103F6;0.99332!10191-103E2;0.238046!10563-108A5;0.000986908
|name=HNF6_f1
|name=HNF6_f1
|tomtom_result=Foxa2#MA0047.2;1;0.000200894;0.0956255;0.184426;11;TTTATTGATTTTTT;CAATATTTACTT;+!onecut#MA0235.1;-4;0.000391087;0.186157;0.184426;7;TTTATTGATTTTTT;TTGATTT;+!SPT23#MA0388.1;-4;0.00123522;0.587963;0.38833;8;TTTATTGATTTTTT;TTGATTTC;-!PBX1#MA0070.1;1;0.00249706;1.1886;0.466722;11;TTTATTGATTTTTT;TTTGATTGATGG;-!Foxd3#MA0041.1;1;0.00320034;1.52336;0.466722;11;TTTATTGATTTTTT;GAATGTTTGTTT;+!tll#MA0459.1;-3;0.00460822;2.19351;0.466722;10;TTTATTGATTTTTT;TTTGACTTTT;-!Foxq1#MA0040.1;-2;0.00479151;2.28076;0.466722;11;TTTATTGATTTTTT;TATTGTTTATT;+!Lhx3#MA0135.1;2;0.00489257;2.32887;0.466722;11;TTTATTGATTTTTT;GATTAATTAATTT;-!STB3#MA0390.1;7;0.0049544;2.35829;0.466722;14;TTTATTGATTTTTT;GTCCAAAATTTTTCACTCTGG;+!CG4328#MA0182.1;0;0.00545548;2.59681;0.466722;7;TTTATTGATTTTTT;TTTATTA;+!SRY#MA0084.1;-3;0.00560304;2.66705;0.466722;9;TTTATTGATTTTTT;ATTGTTTAC;-!FOXI1#MA0042.1;1;0.00652593;3.10634;0.466722;11;TTTATTGATTTTTT;GGATGTTTGTTT;+!Foxa2#MA0047.2;-2;0.00652593;3.10634;0.466722;12;TTTATTGATTTTTT;TGTTTACTTAGG;+!Gfi#MA0038.1;-2;0.00707334;3.36691;0.466722;10;TTTATTGATTTTTT;CAGTGATTTG;-!D#MA00445.1;0;0.0079863;3.80148;0.470766;11;TTTATTGATTTTTT;TCCATTGTTCT;+!Sox5#MA0087.1;-3;0.0106755;5.08154;0.544318;7;TTTATTGATTTTTT;ATTGTTA;-!cad#MA0216.1;0;0.0106755;5.08154;0.544318;7;TTTATTGATTTTTT;TTTATTG;+!FOXF2#MA0030.1;0;0.0116637;5.55192;0.544318;14;TTTATTGATTTTTT;ATTGTTTACGTTTG;-!Dfd#MA0186.1;-1;0.0131797;6.27353;0.544318;7;TTTATTGATTTTTT;TTAATGA;+!Scr#MA0203.1;-1;0.0131797;6.27353;0.544318;7;TTTATTGATTTTTT;TTAATGA;+!NHP6A#MA0345.1;5;0.0138173;6.57703;0.544318;14;TTTATTGATTTTTT;TCATTTTTATATATAGGTCAT;-!NHP6B#MA0346.1;4;0.0145415;6.92174;0.544318;14;TTTATTGATTTTTT;TTTATTTATATATAATATGA;+!RLM1#MA0369.1;7;0.0150374;7.15781;0.544318;11;TTTATTGATTTTTT;GGTTCTATAAATAGATCC;+!br_Z1#MA0010.1;-1;0.0150937;7.18459;0.544318;13;TTTATTGATTTTTT;GATTTGTCTATTAC;-!btn#MA0215.1;-1;0.0153777;7.31978;0.544318;7;TTTATTGATTTTTT;TTAATGA;+!SOX9#MA0077.1;-1;0.0155825;7.41726;0.544318;9;TTTATTGATTTTTT;CCATTGTTC;-!br_Z4#MA0013.1;0;0.0167524;7.97412;0.564284;11;TTTATTGATTTTTT;TTTGTTTACTA;-
}}
}}

Latest revision as of 12:55, 7 September 2012

Full Name: HNF6_f1

Motif matrix
POACGT
17.6571428571428571.94285714285714174.34285714285714410.057142857142857
27.42857142857141553.7714285714285680.012.799999999999992
32.1714285714285723.7714285714285681.028571428571429617.02857142857144
424.00.00.00.0
50.00.00.024.0
60.01.14285714285714233.08571428571429619.771428571428576
70.00.024.00.0
822.9714285714285680.01.02857142857142960.0
90.07.085714285714280.016.91428571428572
101.94285714285714171.14285714285714232.17142857142857218.742857142857144
114.914285714285722.7428571428571360.016.34285714285714
127.5428571428571363.0857142857142961.828571428571428711.542857142857144
135.9428571428571522.1714285714285726.7428571428571449.142857142857144
147.3428571428571434.9428571428571443.114285714285728.599999999999993

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Foxa2#MA0047.210.0002008940.09562550.18442611TTTATTGATTTTTTCAATATTTACTT+
onecut#MA0235.1-40.0003910870.1861570.1844267TTTATTGATTTTTTTTGATTT+
SPT23#MA0388.1-40.001235220.5879630.388338TTTATTGATTTTTTTTGATTTC-
PBX1#MA0070.110.002497061.18860.46672211TTTATTGATTTTTTTTTGATTGATGG-
Foxd3#MA0041.110.003200341.523360.46672211TTTATTGATTTTTTGAATGTTTGTTT+
tll#MA0459.1-30.004608222.193510.46672210TTTATTGATTTTTTTTTGACTTTT-
Foxq1#MA0040.1-20.004791512.280760.46672211TTTATTGATTTTTTTATTGTTTATT+
Lhx3#MA0135.120.004892572.328870.46672211TTTATTGATTTTTTGATTAATTAATTT-
STB3#MA0390.170.00495442.358290.46672214TTTATTGATTTTTTGTCCAAAATTTTTCACTCTGG+
CG4328#MA0182.100.005455482.596810.4667227TTTATTGATTTTTTTTTATTA+
SRY#MA0084.1-30.005603042.667050.4667229TTTATTGATTTTTTATTGTTTAC-
FOXI1#MA0042.110.006525933.106340.46672211TTTATTGATTTTTTGGATGTTTGTTT+
Foxa2#MA0047.2-20.006525933.106340.46672212TTTATTGATTTTTTTGTTTACTTAGG+
Gfi#MA0038.1-20.007073343.366910.46672210TTTATTGATTTTTTCAGTGATTTG-
D#MA00445.100.00798633.801480.47076611TTTATTGATTTTTTTCCATTGTTCT+
Sox5#MA0087.1-30.01067555.081540.5443187TTTATTGATTTTTTATTGTTA-
cad#MA0216.100.01067555.081540.5443187TTTATTGATTTTTTTTTATTG+
FOXF2#MA0030.100.01166375.551920.54431814TTTATTGATTTTTTATTGTTTACGTTTG-
Dfd#MA0186.1-10.01317976.273530.5443187TTTATTGATTTTTTTTAATGA+
Scr#MA0203.1-10.01317976.273530.5443187TTTATTGATTTTTTTTAATGA+
NHP6A#MA0345.150.01381736.577030.54431814TTTATTGATTTTTTTCATTTTTATATATAGGTCAT-
NHP6B#MA0346.140.01454156.921740.54431814TTTATTGATTTTTTTTTATTTATATATAATATGA+
RLM1#MA0369.170.01503747.157810.54431811TTTATTGATTTTTTGGTTCTATAAATAGATCC+
br_Z1#MA0010.1-10.01509377.184590.54431813TTTATTGATTTTTTGATTTGTCTATTAC-
btn#MA0215.1-10.01537777.319780.5443187TTTATTGATTTTTTTTAATGA+
SOX9#MA0077.1-10.01558257.417260.5443189TTTATTGATTTTTTCCATTGTTC-
br_Z4#MA0013.100.01675247.974120.56428411TTTATTGATTTTTTTTTGTTTACTA-
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