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MacroAPE 1083:Motif TTCNGA: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;10864!02;0;0;0;10864!03;0;10864;0;0!04;2716;2716;2716;2716!05;0;0;10864;0!06;10864;0;0;0 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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110H6;0.421974!10828-111C9;0.621712!10788-110H5;0.562601!10792-110H9;0.87595!10765-110E9;0.968668!10829-111D1;0.467872!10830-111D2;0.736836!10831-111D3;0.725108!10832-111D4;0.937184!10833-111D5;0.914384!10764-110E8;0.735749!10770-110F5;0.509554!10399-106A3;0.87157!10400-106A4;0.839437!10405-106A9;0.86826!10834-111D6;0.926835!10835-111D7;0.798578!10836-111D8;0.440558!10837-111D9;0.234339!10699-109G6;0.883194!10802-111A1;0.734757!10796-110I4;0.202146!10010-101C1;0.617076!10810-111A9;0.897236!10421-106C7;0.943018!10708-109H6;0.276507!12235-129G3;0.96885!12236-129G4;0.00558472!12237-129G5;0.389489!10167-103B5;0.00511076!10151-102I7;0.764294!10428-106D5;0.695892!10795-110I3;0.538768!10805-111A4;0.450271!10052-101G7;0.529405!10189-103D9;0.956572!10589-108D4;0.322392!10425-106D2;0.180597!10427-106D4;0.484786!10702-109G9;0.0894147!10432-106D9;0.68531!10496-107C1;0.776628!10718-109I7;0.278376!10011-101C2;0.902217!10053-101G8;0.820094!10686-109F2;0.238215!10084-102B3;0.367746!10012-101C3;0.647958!10085-102B4;0.910907!10482-107A5;0.742118!10419-106C5;0.195395!10080-102A8;0.173835!10760-110E4;0.516626!10709-109H7;0.339354!10710-109H8;0.189085!10703-109H1;0.166565!10719-109I8;0.23169!10642-109A3;0.356996!10177-103C6;0.701472!10164-103B2;0.667264!10173-103C2;0.713777!10166-103B4;0.908777!10083-102B2;0.943823!10188-103D8;0.989582!10552-107I3;0.819669!10553-107I4;0.70491!10013-101C4;0.490811!10536-107G5;0.888299!10618-108G6;0.49145!10423-106C9;0.380697!10785-110H2;0.774855!12238-129G6;0.402652!12239-129G7;0.0810436!12240-129G8;0.221066!10416-106C2;0.0988623!10801-110I9;0.410997!10766-110F1;0.8306!10824-111C5;0.363588!10825-111C6;0.515235!10826-111C7;0.472944!10454-106G4;0.411684!10409-106B4;0.485658!10638-108I8;0.709769!10636-108I6;0.468362!10513-107D9;0.233079!10420-106C6;0.3924!10082-102B1;0.471535!10014-101C5;0.207728!10070-101I7;0.424875!10452-106G2;0.743624!10453-106G3;0.0632176!10449-106F8;0.0776887!10042-101F6;0.0703101!10069-101I6;0.871808!10193-103E4;0.996369!10631-108I1;0.640877!10438-106E6;0.887288!10488-107B2;0.479184!10196-103E7;0.261914!10071-101I8;0.508806!10071-101I8;0.961152!10041-101F5;0.856825!10451-106G1;0.913072!10450-106F9;0.85103!10604-108F1;0.929347!10605-108F2;0.987872!10606-108F3;0.967768!10603-108E9;0.756914!10497-107C2;0.731555!10448-106F7;0.426611!10643-109A4;0.863268!10426-106D3;0.125117!10431-106D8;0.477151!10197-103E8;0.89199!10443-106F2;0.607733!10815-111B5;0.312358!10816-111B6;0.466333!10817-111B7;0.42896!10015-101C6;0.44741!10410-106B5;0.697365!10054-101G9;0.1518!10758-110E2;0.827225!10711-109H9;0.957049!10040-101F4;0.838016!10470-106I2;0.838119!10415-106C1;0.21193!10198-103E9;0.896322!10614-108G2;0.801742!10612-108F9;0.988134!10549-107H9;0.276997!10615-108G3;0.975049!10487-107B1;0.0763816!10433-106E1;0.637732!10688-109F4;0.554341!10444-106F3;0.437559!10444-106F3;0.563214!10485-107A8;0.496584!10413-106B8;0.291794!10175-103C4;0.91586!10161-103A8;0.724065!12131-128D7;0.791039!10624-108H3;0.629152!10712-109I1;0.321276!10205-103F7;0.262958!10206-103F8;0.801212!10207-103F9;0.776284!10050-101G5;0.982496!10051-101G6;0.316371!10016-101C7;0.58341!10046-101G1;0.864231!10778-110G4;0.912623!10633-108I3;0.395622!10818-111B8;0.444738!10819-111B9;0.442754!10820-111C1;0.483394!10484-107A7;0.462836!10808-111A7;0.563451!10169-103B7;0.366338!10153-102I9;0.923248!13425-144D5;0.77523!13433-144E4;0.940092!13437-144E8;0.917947!11904-125F5;0.894648!11905-125F6;0.412601!10039-101F3;0.943296!10791-110H8;0.875546!10017-101C8;0.553829!10045-101F9;0.279824!10509-107D5;0.328365!10839-111E2;0.581721!10692-109F8;0.134177!10079-102A7;0.890134!10078-102A6;0.726194!10721-110A1;0.768867!10569-108B2;0.385002!10570-108B3;0.960002!10571-108B4;0.816269!10647-109A8;0.997182!10752-110D5;0.518104!10782-110G8;0.585721!10726-110A6;0.388775!10018-101C9;0.867968!10086-102B5;0.442966!10182-103D2;0.247695!10165-103B3;0.743922!10499-107C4;0.800469!10408-106B3;0.0759136!10019-101D1;0.225185!10068-101I5;0.853837!10075-102A3;0.898998!10077-102A5;0.676792!10727-110A7;0.256437!10775-110G1;0.195099!10412-106B7;0.331544!12231-129F8;0.895914!12232-129F9;0.273458!12233-129G1;0.599159!12234-129G2;0.521891!10414-106B9;0.307119!10170-103B8;0.905154!10183-103D3;0.846131!10150-102I6;0.846063!10174-103C3;0.90631!10155-103A2;0.742801!10038-101F2;0.809125!10838-111E1;0.826104!10759-110E3;0.896533!10514-107E1;0.982685!10465-106H6;0.941491!10691-109F7;0.985918!10843-111E6;0.740146!10844-111E7;0.563557!11747-123G1;0.906445!11748-123G2;0.47473!11749-123G3;0.378276!11750-123G4;0.743084!11751-123G5;0.919472!11840-124H4;0.911468!11752-123G6;0.991455!11753-123G7;0.488798!11754-123G8;0.899205!11755-123G9;0.334886!11756-123H1;0.37125!11833-124G6;0.516255!11760-123H5;0.471251!11836-124G9;0.644643!11758-123H3;0.713036!11835-124G8;0.929962!11762-123H7;0.320968!11838-124H2;0.564886!11757-123H2;0.898991!11759-123H4;0.667705!11761-123H6;0.271732!11842-124H6;0.91949!11837-124H1;0.98923!10568-108B1;0.28249!13230-141I8;0.897328!13231-141I9;0.429256!10696-109G3;0.413892!10493-107B7;0.670925!10494-107B8;0.704617!10850-111F4;0.922158!10851-111F5;0.771484!10852-111F6;0.738922!10853-111F7;0.870701!10854-111F8;0.981259!10855-111F9;0.965361!10856-111G1;0.96985!10847-111F1;0.889502!10846-111E9;0.593067!10848-111F2;0.567302!10845-111E8;0.635706!10857-111G2;0.208875!10858-111G3;0.590055!10156-103A3;0.870694!11901-125F2;0.927741!11902-125F3;0.814675!11903-125F4;0.912101!10689-109F5;0.917279!10648-109A9;0.796013!10784-110H1;0.648112!10744-110C6;0.466385!10772-110F7;0.007404!10474-106I6;0.822355!10600-108E6;0.246578!10684-109E9;0.285267!12226-129F3;0.640083!12227-129F4;0.300253!10508-107D4;0.347295!10539-107G8;0.993255!10607-108F4;0.541653!10555-107I6;0.788562!10774-110F9;0.985051!10637-108I7;0.582522!10663-109C6;0.995053!10728-110A8;0.835446!10729-110A9;0.675569!10430-106D7;0.969297!10730-110B1;0.766745!10813-111B3;0.525297!10812-111B2;0.114728!10037-101F1;0.213826!10172-103C1;0.798653!10163-103B1;0.892027!10076-102A4;0.953038!10073-102A1;0.878589!10036-101E9;0.879344!10195-103E6;0.871441!10277-104E7;0.812433!10434-106E2;0.782047!10550-107I1;0.216132!10545-107H5;0.661927!10544-107H4;0.389801!10704-109H2;0.876623!10510-107D6;0.898774!10558-107I9;0.995577!10020-101D2;0.802509!10732-110B3;0.783704!10049-101G4;0.664089!10698-109G5;0.221928!10437-106E5;0.876442!10417-106C3;0.577227!10035-101E8;0.315548!10171-103B9;0.877935!10157-103A4;0.823092!10034-101E7;0.889238!10072-101I9;0.85176!10199-103F1;0.972019!10200-103F2;0.998861!10697-109G4;0.992952!10723-110A3;0.637332!10179-103C8;0.752276!10160-103A7;0.450282!10180-103C9;0.504605!10162-103A9;0.564781!10021-101D3;0.569069!10840-111E3;0.873614!10706-109H4;0.10751!10033-101E6;0.838181!10032-101E5;0.842427!10490-107B4;0.8474!10439-106E7;0.330748!10022-101D4;0.592888!10176-103C5;0.824127!10469-106I1;0.679236!10067-101I4;0.385285!10411-106B6;0.901466!10471-106I3;0.19339!10030-101E3;0.051215!10475-106I7;0.694174!10787-110H4;0.251669!10477-106I9;0.736348!10695-109G2;0.796345!11771-123I7;0.473906!11772-123I8;0.102613!11773-123I9;0.0682702!10093-102C3;0.0277614!10442-106F1;0.75987!10442-106F1;0.789794!10201-103F3;0.7069!10639-108I9;0.547668!11843-124H7;0.356115!11841-124H5;0.4529!10693-109F9;0.644112!10436-106E4;0.179899!10483-107A6;0.947034!10282-104F3;0.140415!10023-101D5;0.768607!10066-101I3;0.892847!10065-101I2;0.622645!10800-110I8;0.75799!10610-108F7;0.801322!10841-111E4;0.626948!10541-107H1;0.564841!10842-111E5;0.723806!10562-108A4;0.447203!10024-101D6;0.419486!10064-101I1;0.415446!10609-108F6;0.583544!10048-101G3;0.596923!10781-110G7;0.827377!10181-103D1;0.143824!10159-103A6;0.819677!10056-101H2;0.974611!10737-110B8;0.855913!10025-101D7;0.731281!10044-101F8;0.345098!10424-106D1;0.382251!10463-106H4;0.562137!10616-108G4;0.341597!10486-107A9;0.319663!10062-101H8;0.44345!10202-103F4;0.787602!10158-103A5;0.800044!10441-106E9;0.810514!10031-101E4;0.713658!10063-101H9;0.764333!10063-101H9;0.855101!11763-123H8;0.929282!11765-123I1;0.662095!11768-123I4;0.500898!10807-111A6;0.942553!10790-110H7;0.698796!10798-110I6;0.967862!10786-110H3;0.473472!10591-108D6;0.734046!10593-108D8;0.542121!10590-108D5;0.54429!10026-101D8;0.782032!10096-102C6;0.755329!10168-103B6;0.627984!10154-103A1;0.852981!10209-103G2;0.797001!10061-101H7;0.872887!10027-101D9;0.911439!10043-101F7;0.0368813!10783-110G9;0.137231!10028-101E1;0.9688!10060-101H6;0.791935!10203-103F5;0.643011!10059-101H5;0.78553!10047-101G2;0.847996!10029-101E2;0.437364!10058-101H4;0.983863!10418-106C4;0.871537!10492-107B6;0.80946!10694-109G1;0.657526!10797-110I5;0.452989!10057-101H3;0.0807328!10100-102D1;0.970643!10055-101H1;0.933834!10204-103F6;0.539903!10191-103E2;0.741986!10563-108A5;0.460888
|name=motif_TTCNGA
|name=motif_TTCNGA
|tomtom_result=STB4#MA0391.1;0;0.001101;0.524078;0.607302;6;TTCAGA;TTCCGAG;-!CEP3#MA0282.1;1;0.00127584;0.607302;0.607302;6;TTCAGA;TTTCCGAG;-!YBR239C#MA0420.1;1;0.00612067;2.91344;1;6;TTCAGA;GTTCCGGT;-!HAL9#MA0311.1;0;0.00804514;3.82949;1;5;TTCAGA;TTCCG;-!SUT2#MA0400.1;5;0.0137025;6.52239;1;6;TTCAGA;AAATTTTCGGAGTTTATCAT;-
}}
}}

Latest revision as of 13:14, 7 September 2012

Full Name: motif_TTCNGA

Motif matrix
POACGT
0100010864
0200010864
0301086400
042716271627162716
0500108640
0610864000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
STB4#MA0391.100.0011010.5240780.6073026TTCAGATTCCGAG-
CEP3#MA0282.110.001275840.6073020.6073026TTCAGATTTCCGAG-
YBR239C#MA0420.110.006120672.9134416TTCAGAGTTCCGGT-
HAL9#MA0311.100.008045143.8294915TTCAGATTCCG-
SUT2#MA0400.150.01370256.5223916TTCAGAAAATTTTCGGAGTTTATCAT-
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