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MacroAPE 1083:Motif33: Difference between revisions

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9-110H6;0.288029!10828-111C9;0.0679298!10788-110H5;0.0405796!10792-110H9;0.103297!10765-110E9;0.0376322!10829-111D1;0.260509!10830-111D2;0.219557!10831-111D3;0.391106!10832-111D4;0.316032!10833-111D5;0.0367186!10764-110E8;0.031724!10770-110F5;0.147611!10399-106A3;0.10158!10400-106A4;0.104133!10405-106A9;0.149495!10834-111D6;0.133928!10835-111D7;0.0664084!10836-111D8;0.0871557!10837-111D9;0.480945!10699-109G6;0.0798216!10802-111A1;0.441909!10796-110I4;0.0884616!10010-101C1;0.0308218!10810-111A9;0.113591!10421-106C7;0.406378!10708-109H6;0.799252!12235-129G3;0.0674063!12236-129G4;0.105841!12237-129G5;0.063328!10167-103B5;0.0773127!10151-102I7;0.87473!10428-106D5;0.773755!10795-110I3;0.285599!10805-111A4;0.619584!10052-101G7;0.136423!10189-103D9;0.370697!10589-108D4;0.36122!10425-106D2;0.418885!10427-106D4;0.137113!10702-109G9;0.794265!10432-106D9;0.180803!10496-107C1;0.203335!10718-109I7;0.935466!10011-101C2;0.105473!10053-101G8;0.377471!10686-109F2;0.462519!10084-102B3;0.372096!10012-101C3;0.625638!10085-102B4;0.719888!10482-107A5;0.838713!10419-106C5;0.230705!10080-102A8;0.293062!10760-110E4;0.559424!10709-109H7;0.241109!10710-109H8;0.465538!10703-109H1;0.129934!10719-109I8;0.24387!10642-109A3;0.217281!10177-103C6;0.403558!10164-103B2;0.852578!10173-103C2;0.901399!10166-103B4;0.707412!10083-102B2;0.960376!10188-103D8;0.710879!10552-107I3;0.927098!10553-107I4;0.935501!10013-101C4;0.0672781!10536-107G5;0.287691!10618-108G6;0.217056!10423-106C9;0.509873!10785-110H2;0.0761803!12238-129G6;0.0716299!12239-129G7;0.381649!12240-129G8;0.0285825!10416-106C2;0.459707!10801-110I9;0.413211!10766-110F1;0.0439984!10824-111C5;0.0314921!10825-111C6;0.425282!10826-111C7;0.300871!10454-106G4;0.319438!10409-106B4;0.669912!10638-108I8;0.0564935!10636-108I6;0.0448452!10513-107D9;0.207723!10420-106C6;0.206252!10082-102B1;0.139589!10014-101C5;0.571812!10070-101I7;0.0723539!10452-106G2;0.279671!10453-106G3;0.813082!10449-106F8;0.904866!10042-101F6;0.964573!10069-101I6;0.532982!10193-103E4;0.985051!10631-108I1;0.854994!10438-106E6;0.460455!10488-107B2;0.099782!10196-103E7;0.206899!10071-101I8;0.606717!10071-101I8;0.16779!10041-101F5;0.661409!10451-106G1;0.540791!10450-106F9;0.118168!10604-108F1;0.0618545!10605-108F2;0.136879!10606-108F3;0.0399303!10603-108E9;0.0891507!10497-107C2;0.0478192!10448-106F7;0.0175854!10643-109A4;0.105575!10426-106D3;0.457088!10431-106D8;0.222046!10197-103E8;0.0379391!10443-106F2;0.254746!10815-111B5;0.368495!10816-111B6;0.623732!10817-111B7;0.51451!10015-101C6;0.461019!10410-106B5;0.212707!10054-101G9;0.847772!10758-110E2;0.803063!10711-109H9;0.612952!10040-101F4;0.456885!10470-106I2;0.75949!10415-106C1;0.032638!10198-103E9;0.196257!10614-108G2;0.0375423!10612-108F9;0.01204!10549-107H9;0.151561!10615-108G3;0.145741!10487-107B1;0.379537!10433-106E1;0.238548!10688-109F4;0.213034!10444-106F3;0.0540088!10444-106F3;0.0918409!10485-107A8;0.119168!10413-106B8;0.00360107!10175-103C4;0.514892!10161-103A8;0.89677!12131-128D7;0.625504!10624-108H3;0.173573!10712-109I1;0.891683!10205-103F7;0.527526!10206-103F8;0.197551!10207-103F9;0.114151!10050-101G5;0.440007!10051-101G6;0.381364!10016-101C7;0.0969407!10046-101G1;0.221524!10778-110G4;0.191276!10633-108I3;0.387356!10818-111B8;0.830926!10819-111B9;0.450586!10820-111C1;0.336897!10484-107A7;0.352078!10808-111A7;0.0973853!10169-103B7;0.882366!10153-102I9;0.563192!13425-144D5;0.673958!13433-144E4;0.0444345!13437-144E8;0.0409724!11904-125F5;0.0169671!11905-125F6;0.693846!10039-101F3;0.608683!10791-110H8;0.486253!10017-101C8;0.154303!10045-101F9;0.551755!10509-107D5;0.885414!10839-111E2;0.642435!10692-109F8;0.237586!10079-102A7;0.00037107!10078-102A6;0.0676439!10721-110A1;0.133558!10569-108B2;0.325181!10570-108B3;0.606616!10571-108B4;0.635759!10647-109A8;0.756068!10752-110D5;0.23333!10782-110G8;0.00813524!10726-110A6;0.153621!10018-101C9;0.0463397!10086-102B5;0.00133763!10182-103D2;0.000616201!10165-103B3;0.548636!10499-107C4;0.611044!10408-106B3;0.150548!10019-101D1;0.0211101!10068-101I5;0.177556!10075-102A3;0.237235!10077-102A5;0.198334!10727-110A7;0.295292!10775-110G1;0.599976!10412-106B7;0.763292!12231-129F8;0.308089!12232-129F9;0.537796!12233-129G1;0.471989!12234-129G2;0.758701!10414-106B9;0.874862!10170-103B8;0.144411!10183-103D3;0.981093!10150-102I6;0.934793!10174-103C3;0.626263!10155-103A2;0.785457!10038-101F2;0.499318!10838-111E1;0.363818!10759-110E3;0.961439!10514-107E1;0.374955!10465-106H6;0.373136!10691-109F7;0.647485!10843-111E6;0.00980147!10844-111E7;0.389182!11747-123G1;0.600214!11748-123G2;0.542515!11749-123G3;0.185632!11750-123G4;0.866491!11751-123G5;0.580089!11840-124H4;0.260347!11752-123G6;0.154582!11753-123G7;0.494475!11754-123G8;0.2051!11755-123G9;0.37597!11756-123H1;0.975032!11833-124G6;0.81314!11760-123H5;0.257784!11836-124G9;0.969304!11758-123H3;0.433333!11835-124G8;0.756472!11762-123H7;0.430387!11838-124H2;0.898296!11757-123H2;0.612265!11759-123H4;0.79373!11761-123H6;0.506387!11842-124H6;0.841294!11837-124H1;0.0942549!10568-108B1;0.880751!13230-141I8;0.444585!13231-141I9;0.15288!10696-109G3;0.173218!10493-107B7;0.600378!10494-107B8;0.275927!10850-111F4;0.223276!10851-111F5;0.0421855!10852-111F6;0.142903!10853-111F7;0.435897!10854-111F8;0.175243!10855-111F9;0.332902!10856-111G1;0.262587!10847-111F1;0.400157!10846-111E9;0.894262!10848-111F2;0.51997!10845-111E8;0.96951!10857-111G2;0.784606!10858-111G3;0.311998!10156-103A3;0.418401!11901-125F2;0.661143!11902-125F3;0.592649!11903-125F4;0.37828!10689-109F5;0.933705!10648-109A9;1.84916e-05!10784-110H1;0.344466!10744-110C6;0.0598608!10772-110F7;0.0738661!10474-106I6;0.0581582!10600-108E6;0.142245!10684-109E9;0.188928!12226-129F3;0.183798!12227-129F4;0.299948!10508-107D4;0.526646!10539-107G8;0.75623!10607-108F4;0.404011!10555-107I6;0.0442845!10774-110F9;0.320453!10637-108I7;0.321358!10663-109C6;0.715207!10728-110A8;0.11539!10729-110A9;0.28635!10430-106D7;0.330061!10730-110B1;0.686052!10813-111B3;0.0730768!10812-111B2;0.137949!10037-101F1;0.474517!10172-103C1;0.622404!10163-103B1;0.704971!10076-102A4;0.641444!10073-102A1;0.827319!10036-101E9;0.83714!10195-103E6;0.719021!10277-104E7;0.846638!10434-106E2;0.666128!10550-107I1;0.153197!10545-107H5;0.0518999!10544-107H4;0.0880699!10704-109H2;0.170291!10510-107D6;0.782341!10558-107I9;0.2428!10020-101D2;0.125777!10732-110B3;0.149158!10049-101G4;0.641348!10698-109G5;0.413096!10437-106E5;0.725021!10417-106C3;0.504839!10035-101E8;0.343893!10171-103B9;0.704993!10157-103A4;0.885757!10034-101E7;0.769601!10072-101I9;0.788177!10199-103F1;0.81418!10200-103F2;0.530063!10697-109G4;0.476425!10723-110A3;0.990716!10179-103C8;0.0921504!10160-103A7;0.215678!10180-103C9;0.105244!10162-103A9;0.86813!10021-101D3;0.804602!10840-111E3;0.478853!10706-109H4;0.518043!10033-101E6;0.942051!10032-101E5;0.533288!10490-107B4;0.634542!10439-106E7;0.0780188!10022-101D4;0.0756472!10176-103C5;0.323043!10469-106I1;0.758689!10067-101I4;0.0216008!10411-106B6;0.902133!10471-106I3;0.514631!10030-101E3;0.785237!10475-106I7;0.7239!10787-110H4;0.154396!10477-106I9;0.969445!10695-109G2;0.710155!11771-123I7;0.459721!11772-123I8;0.243642!11773-123I9;0.487116!10093-102C3;0.689417!10442-106F1;0.440001!10442-106F1;0.172175!10201-103F3;0.390212!10639-108I9;0.287424!11843-124H7;0.0424527!11841-124H5;0.340001!10693-109F9;0.0400554!10436-106E4;0.0619359!10483-107A6;0.941777!10282-104F3;0.709259!10023-101D5;0.939674!10066-101I3;0.62453!10065-101I2;0.867172!10800-110I8;0.490091!10610-108F7;0.175697!10841-111E4;0.422876!10541-107H1;0.885767!10842-111E5;0.0176787!10562-108A4;0.430445!10024-101D6;0.0235286!10064-101I1;0.0361374!10609-108F6;0.22079!10048-101G3;0.109398!10781-110G7;0.589527!10181-103D1;0.245333!10159-103A6;0.554005!10056-101H2;0.418823!10737-110B8;0.913452!10025-101D7;0.41591!10044-101F8;0.183414!10424-106D1;0.0836662!10463-106H4;0.910675!10616-108G4;0.266408!10486-107A9;0.0329066!10062-101H8;0.0706105!10202-103F4;0.518606!10158-103A5;0.164162!10441-106E9;0.469576!10031-101E4;0.222759!10063-101H9;0.742239!10063-101H9;0.751634!11763-123H8;0.0463565!11765-123I1;0.327169!11768-123I4;0.177925!10807-111A6;0.133734!10790-110H7;0.0232351!10798-110I6;0.609001!10786-110H3;0.147662!10591-108D6;0.310949!10593-108D8;0.650657!10590-108D5;0.266111!10026-101D8;0.182525!10096-102C6;0.953974!10168-103B6;0.457444!10154-103A1;0.758734!10209-103G2;0.702735!10061-101H7;0.106186!10027-101D9;0.642663!10043-101F7;0.859346!10783-110G9;0.759916!10028-101E1;0.415446!10060-101H6;0.428231!10203-103F5;0.651172!10059-101H5;0.293488!10047-101G2;0.585174!10029-101E2;0.292224!10058-101H4;0.198585!10418-106C4;0.603355!10492-107B6;0.12615!10694-109G1;0.0548052!10797-110I5;0.291377!10057-101H3;0.129198!10100-102D1;0.617656!10055-101H1;0.529855!10204-103F6;0.675113!10191-103E2;0.527229!10563-108A5;0.25038
|name=motif33
|name=motif33
|tomtom_result=Foxd3#MA0041.1;1;8.61267e-05;0.0409963;0.0817122;8;AACAAACA;AAACAAACATTC;-!fkh#MA0446.1;3;0.000285641;0.135965;0.129053;8;AACAAACA;TTAAGCAAACA;-!FOXI1#MA0042.1;1;0.000408077;0.194244;0.129053;8;AACAAACA;AAACAAACATCC;-!FOXA1#MA0148.1;3;0.000924317;0.439975;0.219235;8;AACAAACA;CAAAGTAAACA;-!mirr#MA0233.1;-3;0.00129259;0.615271;0.245267;5;AACAAACA;AAACA;+!Foxa2#MA0047.2;1;0.0017348;0.825765;0.274313;8;AACAAACA;AAGTAAATATTG;-!ara#MA0210.1;-3;0.00202833;0.965485;0.274909;5;AACAAACA;TAACA;+!Foxq1#MA0040.1;0;0.00247932;1.18015;0.29403;8;AACAAACA;AATAAACAATA;-!HCM1#MA0317.1;-1;0.00581482;2.76785;0.612975;7;AACAAACA;ATAAACAA;+!caup#MA0217.1;-3;0.00655674;3.12101;0.622067;5;AACAAACA;TAACA;+!FKH1#MA0296.1;9;0.00738488;3.5152;0.636942;8;AACAAACA;TGAATTGTAAACAAAGAGGA;+!br_Z4#MA0013.1;1;0.00958493;4.56243;0.741413;8;AACAAACA;TAGTAAACAAA;+!Sox5#MA0087.1;-3;0.0111037;5.28534;0.741413;5;AACAAACA;AAACAAT;+!FKH2#MA0297.1;-1;0.0111037;5.28534;0.741413;7;AACAAACA;GTAAACA;+!YAP5#MA0417.1;-3;0.0120092;5.71639;0.741413;5;AACAAACA;AAGCAT;+!Foxa2#MA0047.2;4;0.012908;6.1442;0.741413;8;AACAAACA;CCTAAGTAAACA;-!br_Z1#MA0010.1;2;0.013285;6.32364;0.741413;8;AACAAACA;GTAATAAACAAATC;+!HMG-I/Y#MA0045.1;1;0.0176767;8.41411;0.931703;8;AACAAACA;CAACAAATGGAAAAAC;+!SRY#MA0084.1;-1;0.019152;9.11635;0.944295;7;AACAAACA;GTAAACAAT;+!STE12#MA0393.1;-1;0.0199062;9.47536;0.944295;7;AACAAACA;TGAAACA;+
}}
}}

Latest revision as of 14:14, 7 September 2012

Full Name: motif33

Motif matrix
POACGT
0129720000
0216183232795271683
03018471112490
0429720000
0524890483000
0629720000
0702972000
0829720000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Foxd3#MA0041.118.61267e-050.04099630.08171228AACAAACAAAACAAACATTC-
fkh#MA0446.130.0002856410.1359650.1290538AACAAACATTAAGCAAACA-
FOXI1#MA0042.110.0004080770.1942440.1290538AACAAACAAAACAAACATCC-
FOXA1#MA0148.130.0009243170.4399750.2192358AACAAACACAAAGTAAACA-
mirr#MA0233.1-30.001292590.6152710.2452675AACAAACAAAACA+
Foxa2#MA0047.210.00173480.8257650.2743138AACAAACAAAGTAAATATTG-
ara#MA0210.1-30.002028330.9654850.2749095AACAAACATAACA+
Foxq1#MA0040.100.002479321.180150.294038AACAAACAAATAAACAATA-
HCM1#MA0317.1-10.005814822.767850.6129757AACAAACAATAAACAA+
caup#MA0217.1-30.006556743.121010.6220675AACAAACATAACA+
FKH1#MA0296.190.007384883.51520.6369428AACAAACATGAATTGTAAACAAAGAGGA+
br_Z4#MA0013.110.009584934.562430.7414138AACAAACATAGTAAACAAA+
Sox5#MA0087.1-30.01110375.285340.7414135AACAAACAAAACAAT+
FKH2#MA0297.1-10.01110375.285340.7414137AACAAACAGTAAACA+
YAP5#MA0417.1-30.01200925.716390.7414135AACAAACAAAGCAT+
Foxa2#MA0047.240.0129086.14420.7414138AACAAACACCTAAGTAAACA-
br_Z1#MA0010.120.0132856.323640.7414138AACAAACAGTAATAAACAAATC+
HMG-I/Y#MA0045.110.01767678.414110.9317038AACAAACACAACAAATGGAAAAAC+
SRY#MA0084.1-10.0191529.116350.9442957AACAAACAGTAAACAAT+
STE12#MA0393.1-10.01990629.475360.9442957AACAAACATGAAACA+
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