FFCP PHASE1:Mm9::chr2:146839658..146839668,+: Difference between revisions
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|id=chr2:146839658..146839668,+ | |id=chr2:146839658..146839668,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.80e-08!9;CL:0002251!3.80e-08!9 | |ontology_enrichment_celltype=CL:0002563!3.80e-08!9;CL:0002251!3.80e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.66e-44,3;CL:0002563,2.28e-26,9;CL:0002251,2.28e-26,9;CL:0000223,1.18e-18,20;CL:0002076,4.22e-16,15;CL:0000213,6.79e-16,1;CL:0002078,6.79e-16,1;CL:0000115,6.79e-16,1;CL:0002262,6.79e-16,1;CL:1000398,6.79e-16,1;CL:0000625,1.33e-15,1;CL:0000066,4.96e-15,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!3.80e-08!9;UBERON:0004808!3.80e-08!9;UBERON:0001277!3.80e-08!9;UBERON:0002370!1.84e-07!23;UBERON:0000974!1.84e-07!23;UBERON:0004807!1.84e-07!23;UBERON:0005058!1.84e-07!23;UBERON:0003351!1.84e-07!23;UBERON:0009113!1.84e-07!23;UBERON:0003295!1.84e-07!23;UBERON:0009722!1.84e-07!23;UBERON:0005562!1.84e-07!23;UBERON:0007690!1.84e-07!23;UBERON:0000490!2.23e-07!66;UBERON:0003929!2.71e-07!55;UBERON:0005911!4.13e-07!69;UBERON:0000072!5.17e-07!27;UBERON:0006562!5.21e-07!24;UBERON:0003408!5.21e-07!24;UBERON:0001557!5.21e-07!24;UBERON:0001042!5.21e-07!24;UBERON:0008814!5.21e-07!24;UBERON:0009145!5.21e-07!24 | |ontology_enrichment_uberon=UBERON:0003350!3.80e-08!9;UBERON:0004808!3.80e-08!9;UBERON:0001277!3.80e-08!9;UBERON:0002370!1.84e-07!23;UBERON:0000974!1.84e-07!23;UBERON:0004807!1.84e-07!23;UBERON:0005058!1.84e-07!23;UBERON:0003351!1.84e-07!23;UBERON:0009113!1.84e-07!23;UBERON:0003295!1.84e-07!23;UBERON:0009722!1.84e-07!23;UBERON:0005562!1.84e-07!23;UBERON:0007690!1.84e-07!23;UBERON:0000490!2.23e-07!66;UBERON:0003929!2.71e-07!55;UBERON:0005911!4.13e-07!69;UBERON:0000072!5.17e-07!27;UBERON:0006562!5.21e-07!24;UBERON:0003408!5.21e-07!24;UBERON:0001557!5.21e-07!24;UBERON:0001042!5.21e-07!24;UBERON:0008814!5.21e-07!24;UBERON:0009145!5.21e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.28e-26,9;UBERON:0004808,2.28e-26,9;UBERON:0001277,2.28e-26,9;UBERON:0000485,1.04e-21,11;UBERON:0001242,1.78e-18,13;UBERON:0001262,1.78e-18,13;UBERON:0004786,1.78e-18,13;UBERON:0000344,4.22e-16,15;UBERON:0002394,6.79e-16,1;UBERON:0001281,6.79e-16,1;UBERON:0000353,6.79e-16,1;UBERON:0003497,6.79e-16,1;UBERON:0003909,6.79e-16,1;UBERON:0003928,6.79e-16,1;UBERON:0003835,6.79e-16,1;UBERON:0003513,6.79e-16,1;UBERON:0001280,6.79e-16,1;UBERON:0004647,6.79e-16,1;UBERON:0002294,6.79e-16,1;UBERON:0001173,6.79e-16,1;UBERON:0004912,6.79e-16,1;UBERON:0005171,6.79e-16,1;UBERON:0004923,2.77e-10,24;UBERON:0000160,4.46e-08,31;UBERON:0003929,4.74e-07,55 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,1.20985684522732,0,0.671517087647559,0,0.258246646883153,0.422366166455,0.234064526321993,0,0,0.342401459862411,0.174840804837995,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,3.17736781726402,1.49611180822643,3.67504841272264,0.418531630736908,0.7813353445238,0,0.588231488031014,0.683045484958446,0,0.377690453926732,0,0,0.782391344348039,0,0,0,0,0,0,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0.860423876981386,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.390267295715598,0,0,0,0.163863314715738,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0.13020438484395,0,0,0,0.632022241256357,0.202725215290164,0,0,0.179026695667481,0.39736270956253,0,0.147689527174577,0.302899349844443,0.0762068066549998,0,0.292373642219257,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0.407412341537585,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.909998478779072,1.20985684522732,0,0.671517087647559,0,0.258246646883153,0.422366166455,0.234064526321993,0,0,0.342401459862411,0.174840804837995,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,3.17736781726402,1.49611180822643,3.67504841272264,0.418531630736908,0.7813353445238,0,0.588231488031014,0.683045484958446,0,0.377690453926732,0,0,0.782391344348039,0,0,0,0,0,0,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0.860423876981386,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.390267295715598,0,0,0,0.163863314715738,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0.13020438484395,0,0,0,0.632022241256357,0.202725215290164,0,0,0.179026695667481,0.39736270956253,0,0.147689527174577,0.302899349844443,0.0762068066549998,0,0.292373642219257,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0.407412341537585,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:146839658..146839668,+ | |short_description=p@chr2:146839658..146839668,+ | ||
}} | }} |
Revision as of 14:34, 13 November 2012
Short description: | p@chr2:146839658..146839668, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:146839658..146839668, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.66e-44 | 3 |
intestinal epithelial cell | 2.28e-26 | 9 |
epithelial cell of alimentary canal | 2.28e-26 | 9 |
endodermal cell | 1.18e-18 | 20 |
endo-epithelial cell | 4.22e-16 | 15 |
lining cell | 6.79e-16 | 1 |
meso-epithelial cell | 6.79e-16 | 1 |
endothelial cell | 6.79e-16 | 1 |
endothelial cell of sinusoid | 6.79e-16 | 1 |
endothelial cell of hepatic sinusoid | 6.79e-16 | 1 |
CD8-positive, alpha-beta T cell | 1.33e-15 | 1 |
epithelial cell | 4.96e-15 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.28e-26 | 9 |
gastrointestinal system epithelium | 2.28e-26 | 9 |
intestinal epithelium | 2.28e-26 | 9 |
simple columnar epithelium | 1.04e-21 | 11 |
intestinal mucosa | 1.78e-18 | 13 |
wall of intestine | 1.78e-18 | 13 |
gastrointestinal system mucosa | 1.78e-18 | 13 |
mucosa | 4.22e-16 | 15 |
bile duct | 6.79e-16 | 1 |
hepatic sinusoid | 6.79e-16 | 1 |
parenchyma | 6.79e-16 | 1 |
abdomen blood vessel | 6.79e-16 | 1 |
sinusoid | 6.79e-16 | 1 |
digestive system duct | 6.79e-16 | 1 |
abdominal segment blood vessel | 6.79e-16 | 1 |
trunk blood vessel | 6.79e-16 | 1 |
liver parenchyma | 6.79e-16 | 1 |
liver lobule | 6.79e-16 | 1 |
biliary system | 6.79e-16 | 1 |
biliary tree | 6.79e-16 | 1 |
biliary bud | 6.79e-16 | 1 |
hepatic duct | 6.79e-16 | 1 |
organ component layer | 2.77e-10 | 24 |
intestine | 4.46e-08 | 31 |
gut epithelium | 4.74e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.