FFCP PHASE1:Mm9::chr6:78321851..78321871,-: Difference between revisions
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|id=chr6:78321851..78321871,- | |id=chr6:78321851..78321871,- | ||
|ontology_enrichment_celltype=CL:0000239!7.99e-28!6;CL:0000677!7.99e-28!6;CL:0000212!7.99e-28!6;CL:0000584!7.99e-28!6;CL:0002563!1.23e-24!9;CL:0002251!1.23e-24!9;CL:0000075!8.36e-24!7;CL:0000066!2.34e-17!25;CL:0000473!5.14e-15!3;CL:0000627!5.14e-15!3;CL:0000682!5.14e-15!3;CL:0002076!1.59e-14!15;CL:0000223!1.02e-10!20 | |ontology_enrichment_celltype=CL:0000239!7.99e-28!6;CL:0000677!7.99e-28!6;CL:0000212!7.99e-28!6;CL:0000584!7.99e-28!6;CL:0002563!1.23e-24!9;CL:0002251!1.23e-24!9;CL:0000075!8.36e-24!7;CL:0000066!2.34e-17!25;CL:0000473!5.14e-15!3;CL:0000627!5.14e-15!3;CL:0000682!5.14e-15!3;CL:0002076!1.59e-14!15;CL:0000223!1.02e-10!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.08e-24,3;CL:0000239,9.15e-13,6;CL:0000677,9.15e-13,6;CL:0000584,9.15e-13,6;CL:0000066,2.51e-11,25;CL:0000075,4.98e-11,7;CL:0000473,1.00e-10,7;CL:0002563,1.05e-08,9;CL:0002251,1.05e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.05e-43!15;UBERON:0001242!2.98e-35!13;UBERON:0000060!2.98e-35!13;UBERON:0001262!2.98e-35!13;UBERON:0004786!2.98e-35!13;UBERON:0004923!1.13e-26!24;UBERON:0003350!1.23e-24!9;UBERON:0004808!1.23e-24!9;UBERON:0001277!1.23e-24!9;UBERON:0000485!4.79e-20!11;UBERON:0000331!7.90e-16!3;UBERON:0002116!7.90e-16!3;UBERON:0001204!7.90e-16!3;UBERON:0001168!7.90e-16!3;UBERON:0000160!4.38e-14!43;UBERON:0001962!3.06e-10!2;UBERON:0001961!3.06e-10!2;UBERON:0001744!3.06e-10!2;UBERON:0005409!9.38e-10!59;UBERON:0002465!4.17e-07!3 | |ontology_enrichment_uberon=UBERON:0000344!1.05e-43!15;UBERON:0001242!2.98e-35!13;UBERON:0000060!2.98e-35!13;UBERON:0001262!2.98e-35!13;UBERON:0004786!2.98e-35!13;UBERON:0004923!1.13e-26!24;UBERON:0003350!1.23e-24!9;UBERON:0004808!1.23e-24!9;UBERON:0001277!1.23e-24!9;UBERON:0000485!4.79e-20!11;UBERON:0000331!7.90e-16!3;UBERON:0002116!7.90e-16!3;UBERON:0001204!7.90e-16!3;UBERON:0001168!7.90e-16!3;UBERON:0000160!4.38e-14!43;UBERON:0001962!3.06e-10!2;UBERON:0001961!3.06e-10!2;UBERON:0001744!3.06e-10!2;UBERON:0005409!9.38e-10!59;UBERON:0002465!4.17e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.61e-26,15;UBERON:0000331,1.76e-25,3;UBERON:0002116,1.76e-25,3;UBERON:0001204,1.76e-25,3;UBERON:0001168,1.76e-25,3;UBERON:0001242,1.67e-22,13;UBERON:0001262,1.67e-22,13;UBERON:0004786,1.67e-22,13;UBERON:0002108,2.70e-19,4;UBERON:0004923,2.91e-16,24;UBERON:0000160,1.76e-12,31;UBERON:0003199,4.39e-09,1;UBERON:0003350,1.05e-08,9;UBERON:0004808,1.05e-08,9;UBERON:0001277,1.05e-08,9;UBERON:0005409,4.27e-08,47;UBERON:0000485,3.21e-07,11 | |||
|phase1_expression=0,4.88565570695105,8.64498554840118,0.60492842261366,5.50985302940982,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.37645568640302,1.14846392823004,4.73838195774982,4.95583835177545,16.1519906537918,6.5527833737582,17.9601713630797,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,4.88565570695105,8.64498554840118,0.60492842261366,5.50985302940982,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.37645568640302,1.14846392823004,4.73838195774982,4.95583835177545,16.1519906537918,6.5527833737582,17.9601713630797,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78321851..78321871,- | |short_description=p@chr6:78321851..78321871,- | ||
}} | }} |
Revision as of 19:14, 13 November 2012
Short description: | p@chr6:78321851..78321871, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78321851..78321871, - |
Coexpression cluster: | MCL_coexpression_mm9:448 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.08e-24 | 3 |
brush border epithelial cell | 9.15e-13 | 6 |
gut absorptive cell | 9.15e-13 | 6 |
enterocyte | 9.15e-13 | 6 |
epithelial cell | 2.51e-11 | 25 |
columnar/cuboidal epithelial cell | 4.98e-11 | 7 |
defensive cell | 1.00e-10 | 7 |
intestinal epithelial cell | 1.05e-08 | 9 |
epithelial cell of alimentary canal | 1.05e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.61e-26 | 15 |
ileal mucosa | 1.76e-25 | 3 |
ileum | 1.76e-25 | 3 |
mucosa of small intestine | 1.76e-25 | 3 |
wall of small intestine | 1.76e-25 | 3 |
intestinal mucosa | 1.67e-22 | 13 |
wall of intestine | 1.67e-22 | 13 |
gastrointestinal system mucosa | 1.67e-22 | 13 |
small intestine | 2.70e-19 | 4 |
organ component layer | 2.91e-16 | 24 |
intestine | 1.76e-12 | 31 |
egg chamber | 4.39e-09 | 1 |
epithelium of mucosa | 1.05e-08 | 9 |
gastrointestinal system epithelium | 1.05e-08 | 9 |
intestinal epithelium | 1.05e-08 | 9 |
gastrointestinal system | 4.27e-08 | 47 |
simple columnar epithelium | 3.21e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.