FFCP PHASE1:Mm9::chr5:125873420..125873436,-: Difference between revisions
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|id=chr5:125873420..125873436,- | |id=chr5:125873420..125873436,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.99e-12,46;CL:0000134,1.99e-12,46;CL:0002563,6.10e-12,9;CL:0002251,6.10e-12,9;CL:0000239,4.57e-11,6;CL:0000677,4.57e-11,6;CL:0000584,4.57e-11,6;CL:0000219,4.60e-11,54;CL:0000066,5.61e-11,25;CL:0000034,2.31e-09,97;CL:0000075,2.33e-09,7;CL:0000223,8.03e-09,20;CL:0000557,1.10e-08,7;CL:0000473,2.66e-08,7;CL:0000988,3.36e-08,32;CL:0002032,3.36e-08,32;CL:0000037,3.36e-08,32;CL:0000837,3.36e-08,32;CL:0000049,8.82e-08,19;CL:0000723,1.14e-07,91;CL:0000048,1.14e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.99e-12,46;UBERON:0003350,6.10e-12,9;UBERON:0004808,6.10e-12,9;UBERON:0001277,6.10e-12,9;UBERON:0000485,1.73e-09,11;UBERON:0001242,8.55e-08,13;UBERON:0001262,8.55e-08,13;UBERON:0004786,8.55e-08,13 | |||
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|phase1_expression=0.480446541314382,2.44282785347553,1.36499771816861,3.62957053568196,5.00895729946347,1.34303417529512,1.40167584357315,0,0.84473233291,0.468129052643987,0.34243593645101,0.239316476986009,0.513602189793617,0.0874204024189974,0.333109761815663,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.510259740906419,1.68794617041505,3.13439746966722,0.639969691173627,0.68822784320151,2.29692785646008,1.29228598847722,1.29282739611533,0.190023419456374,0.756090389279792,0.443461021310609,1.27006134691926,0.61506478758457,0,1.1554064790051,0,1.42918549383658,3.34825304589526,0,0.523523743973798,29.9998058895817,3.41522742479223,1.94204141212461,0.755380907853464,0.709638518536602,0.367093504323363,2.34717403304412,0,0.219686182734472,0.194429899074283,0.55994568650145,0,2.18117387875057,1.45072428402269,0.336093799142464,0,1.14613375975503,0,0,0,0,0,0,0.449949858640699,1.97773272513395,2.1314403448383,0,1.15265491596466,0.103689612308478,0.270011876663381,0,0.856952953211411,0.220868540951614,0.489963196859816,0.575072826109418,0,0,0,0.153606533256243,0.527545150920775,0.640413505216868,1.04182674111352,0,0.56276261003168,0.30559649555362,0,0.142371680799103,0.372798891650601,0.681535739998656,0.377857800533928,3.47837386442013,0.860423876981386,1.3599426674155,0.539703191637817,0,1.34408066129201,0.280888840263504,0.340860645156116,1.55871602761721,1.06001872353102,0,0,0,0,0.649473123033642,0.506719730950197,0,0.34255163915718,0.776813650941515,0.445326417194474,0.520455980298408,0.304465478312141,0.691846491768175,0.452167921657868,0,0.251333182659351,0.988779870937496,0,1.76922110389975,0,0.220841518460394,0.484875253135222,0,0.585561594023094,0.628340120440365,0.255457055208591,2.99537811264801,2.39961092397363,2.66847476853436,0.149790639404823,0.915001205637253,0.376963056338593,0.173824320192276,0.767146371990992,0.62336413367868,0.486723789203273,0.203678727700633,0.373220911830279,0.758168275301024,0.420883711772948,0.260240885925407,1.37941262660084,0,0.452114453507145,0.204109497453984,0.2562274405697,0.187403449119458,0.517406741478031,0.215567992932842,0,0.175951124163949,0.43839146485515,0.556094498451196,0.696504333044333,0.205782136407943,0.199034266818493,1.40442637462647,1.80143534980301,2.27330799516474,0.207125772535502,0.469052119962192,0.36012412292203,0.473489471170421,0.196764231747404,0.308534225774757,0.697601834251224,0.536546802799238,0.467061369468678,0.329119699826961,0.164167464079095,0.162137619091711,0.292399974850665,0.658650345873152,0.402619256281115,0,0.514523061896422,0.660837565967596,0.528901133327089,0,0.464473343720877,0.515469845288373,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.596869416123452,0,0,0.216138049874694,0.398282546508734,0.758671603812327,0.228497025219458,0,0.610953983535943,0.193952487167626,0.210407459670956,0.379419222745544,0.295220295959204,0.941992367048249,0.616985819609003,0,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0.358794827043824,0,0.739012760666419,0.189491411770485,0,0,0.234690248288502,0.502518772325447,0.476087281772027,0.390267295715598,0,0,0.159454768657487,0.327726629431476,0.863424909329478,0.433947175744535,1.50791283939272,1.63171705145613,0.983528546038072,0.275936746304732,0.642202359951168,0.468846746368813,0,0.252470927204373,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0.668396022247182,0.849229592366497,1.21443210502468,0.584511715822624,0,1.60660658210904,0.425820255624806,0.35613120733451,0,0.164970122972535,1.32745138339963,0.728341908464944,0,0.565815239267694,0,0.922305443831782,0.516856586336442,1.09060118843252,0.356497378384721,0.316036757935816,0,0,1.70219802876894,0.36012218806262,0.388076051348264,0.857348140126369,0.354680467284547,0.713475270408282,0.493647061806363,0.304464949114599,0.23467170806371,0.21183207086382,0.882113592219848,0.49465875882444,0.484393280087717,0.301564624640779,0.477489376012546,0.328281799490123,0.582961673259701,0.370850604021019,0.341741761595705,0.206386867963223,0.185194527369712,0,0,0.228778173206523,1.86976272993241,1.6794174278839,2.62579950228405,0,0,0,0.324016022465404,0.418176592028937,0.655087691238533,0.269728692769641,0.0826534557253359,0.523511883968059,0.648074866458964,0,0,0.598066184175915,0.165458490457098,0,0.258319646955462,0.675824501963113,0.117357238645754,0,0.314578033277133,0.241584120826006,0.288030006257865,0.632022241256357,0.202725215290164,0.102710957164827,0.389762468933385,0.537080087002444,0.596044064343795,0,0.738447635872886,0.403865799792591,0.457240839929999,0.403304740547362,1.07203668813728,0.769694733122636,0.584384510907845,0.906921534460845,0.221985953374065,0.179427713218951,0,0.386379188064381,0.93841237725591,0.549454872801795,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0,0.685082519770642,0,0.675022500231806,0.45032120322422,0,0,0.207574695168353,0.798049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| ||
|short_description=p@chr5:125873420..125873436,- | |short_description=p@chr5:125873420..125873436,- | ||
}} | }} |
Revision as of 13:26, 14 November 2012
Short description: | p@chr5:125873420..125873436, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:125873420..125873436, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.99e-12 | 46 |
mesenchymal cell | 1.99e-12 | 46 |
intestinal epithelial cell | 6.10e-12 | 9 |
epithelial cell of alimentary canal | 6.10e-12 | 9 |
brush border epithelial cell | 4.57e-11 | 6 |
gut absorptive cell | 4.57e-11 | 6 |
enterocyte | 4.57e-11 | 6 |
motile cell | 4.60e-11 | 54 |
epithelial cell | 5.61e-11 | 25 |
stem cell | 2.31e-09 | 97 |
columnar/cuboidal epithelial cell | 2.33e-09 | 7 |
endodermal cell | 8.03e-09 | 20 |
granulocyte monocyte progenitor cell | 1.10e-08 | 7 |
defensive cell | 2.66e-08 | 7 |
hematopoietic cell | 3.36e-08 | 32 |
hematopoietic oligopotent progenitor cell | 3.36e-08 | 32 |
hematopoietic stem cell | 3.36e-08 | 32 |
hematopoietic multipotent progenitor cell | 3.36e-08 | 32 |
common myeloid progenitor | 8.82e-08 | 19 |
somatic stem cell | 1.14e-07 | 91 |
multi fate stem cell | 1.14e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.99e-12 | 46 |
epithelium of mucosa | 6.10e-12 | 9 |
gastrointestinal system epithelium | 6.10e-12 | 9 |
intestinal epithelium | 6.10e-12 | 9 |
simple columnar epithelium | 1.73e-09 | 11 |
intestinal mucosa | 8.55e-08 | 13 |
wall of intestine | 8.55e-08 | 13 |
gastrointestinal system mucosa | 8.55e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.