Personal tools

FFCP PHASE1:Mm9::chr5:124802266..124802311,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr5:124802266..124802311,-
|id=chr5:124802266..124802311,-
|ontology_enrichment_celltype=CL:0000055!5.33e-18!50;CL:0000221!8.41e-17!44;CL:0000133!8.41e-17!44;CL:0002319!2.69e-16!43;CL:0000393!1.92e-15!39;CL:0000211!1.92e-15!39;CL:0000540!9.55e-13!33;CL:0000047!9.55e-13!33;CL:0000031!9.55e-13!33;CL:0000404!9.55e-13!33;CL:0002321!2.78e-12!70;CL:0000220!2.78e-12!70;CL:0000107!4.34e-07!9;CL:0000117!4.81e-07!23;CL:0000337!4.81e-07!23
|ontology_enrichment_celltype=CL:0000055!5.33e-18!50;CL:0000221!8.41e-17!44;CL:0000133!8.41e-17!44;CL:0002319!2.69e-16!43;CL:0000393!1.92e-15!39;CL:0000211!1.92e-15!39;CL:0000540!9.55e-13!33;CL:0000047!9.55e-13!33;CL:0000031!9.55e-13!33;CL:0000404!9.55e-13!33;CL:0002321!2.78e-12!70;CL:0000220!2.78e-12!70;CL:0000107!4.34e-07!9;CL:0000117!4.81e-07!23;CL:0000337!4.81e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000221,4.17e-18,44;CL:0000133,4.17e-18,44;CL:0002319,1.46e-17,43;CL:0000393,1.19e-16,39;CL:0000211,1.19e-16,39;CL:0002321,4.85e-14,70;CL:0000540,9.41e-14,33;CL:0000047,9.41e-14,33;CL:0000031,9.41e-14,33;CL:0000404,9.41e-14,33;CL:0000117,1.31e-07,23;CL:0000337,1.31e-07,23;CL:0000107,1.73e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.00e-12!102;UBERON:0000924!2.00e-12!102;UBERON:0006601!2.00e-12!102;UBERON:0000073!6.78e-11!75;UBERON:0001016!6.78e-11!75;UBERON:0001017!2.34e-10!73;UBERON:0005743!2.34e-10!73;UBERON:0002346!1.21e-07!71;UBERON:0003075!1.21e-07!71;UBERON:0007284!1.21e-07!71;UBERON:0000010!1.99e-07!11;UBERON:0002410!4.34e-07!9
|ontology_enrichment_uberon=UBERON:0004121!2.00e-12!102;UBERON:0000924!2.00e-12!102;UBERON:0006601!2.00e-12!102;UBERON:0000073!6.78e-11!75;UBERON:0001016!6.78e-11!75;UBERON:0001017!2.34e-10!73;UBERON:0005743!2.34e-10!73;UBERON:0002346!1.21e-07!71;UBERON:0003075!1.21e-07!71;UBERON:0007284!1.21e-07!71;UBERON:0000010!1.99e-07!11;UBERON:0002410!4.34e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.36e-11,95;UBERON:0000924,4.36e-11,95;UBERON:0006601,4.36e-11,95;UBERON:0001016,2.32e-10,75;UBERON:0001017,8.31e-10,73;UBERON:0000010,7.50e-08,11;UBERON:0002410,1.73e-07,9
|phase1_expression=5.12476310735341,0,0,0,0,3.02182689441402,2.33612640595526,0,0.281577444303333,0.936258105287974,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.255129870453209,2.87943758482567,4.96279599363977,0.639969691173627,0.45881856213434,0.57423196411502,0,2.37018355954478,0.950117097281869,1.76421090831952,2.43903561720835,0.635030673459631,0,0,0.577703239502549,0.997407872150954,1.02084678131185,0,0,0,0,0,0,4.78407908307194,5.27160042341476,13.5824596599644,2.34717403304412,7.41285531693518,3.29529274101708,3.30530828426282,5.17949760013841,2.87505128729943,0,0,0,7.71778308107841,2.86533439938757,4.12537673821954,10.5204559646991,21.1596391708813,14.5781222806421,7.45457970552091,6.22506357277798,0.449949858640699,0,1.4209602298922,6.89080254192331,8.4528027170742,14.6202353354953,18.0907957364465,17.0363218694619,3.71346279724945,3.75476519617743,13.9639511105048,13.801747826626,14.7075005857603,0,0.383062014255563,1.53606533256243,7.25374582516066,5.76372154695181,8.33461392890816,1.67509799400829,2.25105044012672,1.37518422999129,1.76777151284201,3.27454865837937,5.21918448310842,2.65041676666144,4.1564358058732,1.44932244350839,0,0.679971333707751,0,0,0,0.561777680527007,1.70430322578058,2.07828803682295,1.41335829804136,5.35204995151386,5.13305909657271,0,7.11066703153331,1.73192832808971,2.02687892380079,3.0331466700887,0.68510327831436,0,1.48442139064825,2.4287945747259,1.82679286987285,1.61430848079241,1.65794904607885,1.88141931417128,1.13099932196708,0,0,0.884610551949874,2.75003644910596,1.76673214768315,0.969750506270444,1.86391761218122,0.585561594023094,0,1.02182822083437,1.67741174308288,0.599902730993408,0.889491589511453,0.898743836428936,1.37250180845588,2.89005009859588,0.521472960576829,0.767146371990992,0.62336413367868,0.648965052271031,2.95334155165917,3.4833951770826,14.6579199891531,0.841767423545896,3.25301107406759,8.27647575960503,5.94205028357652,4.06903008156431,3.12967896096108,5.76511741281824,4.12287588062807,0.776110112217047,9.91612767491074,6.05139456537022,5.27853372491847,3.5071317188412,2.78047249225598,2.089512999133,1.02891068203972,2.18937693500343,0,0.51469581422943,0.284163499395593,2.27838349789052,2.57978665979206,2.70093092191522,1.65721314909647,1.77087808572663,0.617068451549513,0.232533944750408,1.3413670069981,0.583826711835847,0.822799249567402,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.134206418760372,0.420579897128254,3.91037527041281,0,0.793351699990633,4.69234151177515,2.78684006232526,2.31961430379768,2.42020229548011,1.33426826306922,1.14135375667535,0.474529061544512,1.81168850196412,0.502670417600539,1.39269530428806,1.36474860983384,0,0.648414149624083,1.7922714592893,2.65535061334314,2.85621281524322,3.38123207019241,1.22190796707189,1.55161989734101,0.631222379012867,0.126473074248515,0,0,0,0,0.500535317148282,0.786235980452812,0.899448449539415,0.405720242777006,0,0.763877555344259,0,0.648540907100142,0,0,0.744281895337007,0.312037673114561,0,0,0,0.184753190166605,3.60033682363921,2.93336957595647,2.71592137240301,2.81628297946203,0.670025029767263,0.476087281772027,0.975668239288994,2.99506773801763,3.32197034473162,2.07291199254733,0,0.172684981865896,0,0,0.54390568381871,1.47529281905711,2.48343071674259,1.28440471990234,1.75817529888305,2.95082901678016,1.26235463602186,14.5133780931478,16.3984272604588,18.9572590004863,12.4263774935327,11.3627323782021,9.34152551603147,12.5491317519217,12.5670018901864,10.2774822266096,0.642642632843614,1.98716119291576,2.31485284767432,2.76907830901079,1.15479086080775,0,4.61283208694465,2.41858845571801,1.88605079755898,1.47650946440386,2.45948118355142,3.35956781118687,6.90714086007261,4.63446591900138,0.316036757935816,0,0,4.76615448055303,3.06103859853227,6.33857550535497,4.07240366560025,5.32020700926821,3.74574516964348,2.96188237083818,3.95804433848979,0.938686832254841,0,3.96951116498931,0.65954501176592,1.93757312035087,1.14594557363496,1.19372344003136,0.820704498725306,1.1659233465194,2.78137953015765,0,1.44470807574256,0.740778109478847,0.376736914009382,0,0,1.69978429993855,1.81936888020755,1.65839968565309,0,5.21954389408873,1.82987520414164,1.40406943068342,0.627264888043406,0.655087691238533,1.48350781023303,1.1571483801547,0.523511883968059,0.777689839750757,4.97071450469541,0,1.79419855252775,1.65458490457098,1.36115831840833,0.904118764344118,2.36538575687089,2.58185925020659,1.3020438484395,1.04859344425711,0.483168241652012,0.576060012515731,0.316011120628178,1.62180172232131,1.23253148597793,1.55904987573354,1.43221356533985,0.993406773906324,1.08175904567972,1.03382669022204,0.706765149637033,0.685861259894999,0.604957110821043,0.487289403698762,0.192423683280659,0.350630706544707,0.906921534460845,0,0.179427713218951,0.167884616364078,0.19318959403219,0.375364950902364,0.549454872801795,0,0,0,0.920650473014354,1.14579102687879,0.859265911718438,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,0,8.61434984948666,3.99024873401031,3.07320490357441,1.70174701947806,3.98265008993166,2.38996560985018,2.889207461421,2.26638562962784,1.92551525755089,1.26348605881899,1.52087579934144,1.88626341386076,1.49826411951812,1.85672941974121,1.37845125493472,2.38146845641537,1.85414921511769,1.54327376370964,0.824171801606613,2.64958056241915,2.74295401908332,2.30718548007139,1.1921809497366,2.32554266611726,2.07040636913727,2.36920902096694,1.64635175585495,2.10455769150274,2.44447404922551,5.05028044491965,1.54225523561426,1.57607171800902,2.45538625901814,1.70430525304563,2.70069255373598,6.24526444844865,2.8071793013449,2.36358159453128,2.86932498103265,2.8676884485537,2.31867835620421
|phase1_expression=5.12476310735341,0,0,0,0,3.02182689441402,2.33612640595526,0,0.281577444303333,0.936258105287974,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.255129870453209,2.87943758482567,4.96279599363977,0.639969691173627,0.45881856213434,0.57423196411502,0,2.37018355954478,0.950117097281869,1.76421090831952,2.43903561720835,0.635030673459631,0,0,0.577703239502549,0.997407872150954,1.02084678131185,0,0,0,0,0,0,4.78407908307194,5.27160042341476,13.5824596599644,2.34717403304412,7.41285531693518,3.29529274101708,3.30530828426282,5.17949760013841,2.87505128729943,0,0,0,7.71778308107841,2.86533439938757,4.12537673821954,10.5204559646991,21.1596391708813,14.5781222806421,7.45457970552091,6.22506357277798,0.449949858640699,0,1.4209602298922,6.89080254192331,8.4528027170742,14.6202353354953,18.0907957364465,17.0363218694619,3.71346279724945,3.75476519617743,13.9639511105048,13.801747826626,14.7075005857603,0,0.383062014255563,1.53606533256243,7.25374582516066,5.76372154695181,8.33461392890816,1.67509799400829,2.25105044012672,1.37518422999129,1.76777151284201,3.27454865837937,5.21918448310842,2.65041676666144,4.1564358058732,1.44932244350839,0,0.679971333707751,0,0,0,0.561777680527007,1.70430322578058,2.07828803682295,1.41335829804136,5.35204995151386,5.13305909657271,0,7.11066703153331,1.73192832808971,2.02687892380079,3.0331466700887,0.68510327831436,0,1.48442139064825,2.4287945747259,1.82679286987285,1.61430848079241,1.65794904607885,1.88141931417128,1.13099932196708,0,0,0.884610551949874,2.75003644910596,1.76673214768315,0.969750506270444,1.86391761218122,0.585561594023094,0,1.02182822083437,1.67741174308288,0.599902730993408,0.889491589511453,0.898743836428936,1.37250180845588,2.89005009859588,0.521472960576829,0.767146371990992,0.62336413367868,0.648965052271031,2.95334155165917,3.4833951770826,14.6579199891531,0.841767423545896,3.25301107406759,8.27647575960503,5.94205028357652,4.06903008156431,3.12967896096108,5.76511741281824,4.12287588062807,0.776110112217047,9.91612767491074,6.05139456537022,5.27853372491847,3.5071317188412,2.78047249225598,2.089512999133,1.02891068203972,2.18937693500343,0,0.51469581422943,0.284163499395593,2.27838349789052,2.57978665979206,2.70093092191522,1.65721314909647,1.77087808572663,0.617068451549513,0.232533944750408,1.3413670069981,0.583826711835847,0.822799249567402,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.134206418760372,0.420579897128254,3.91037527041281,0,0.793351699990633,4.69234151177515,2.78684006232526,2.31961430379768,2.42020229548011,1.33426826306922,1.14135375667535,0.474529061544512,1.81168850196412,0.502670417600539,1.39269530428806,1.36474860983384,0,0.648414149624083,1.7922714592893,2.65535061334314,2.85621281524322,3.38123207019241,1.22190796707189,1.55161989734101,0.631222379012867,0.126473074248515,0,0,0,0,0.500535317148282,0.786235980452812,0.899448449539415,0.405720242777006,0,0.763877555344259,0,0.648540907100142,0,0,0.744281895337007,0.312037673114561,0,0,0,0.184753190166605,3.60033682363921,2.93336957595647,2.71592137240301,2.81628297946203,0.670025029767263,0.476087281772027,0.975668239288994,2.99506773801763,3.32197034473162,2.07291199254733,0,0.172684981865896,0,0,0.54390568381871,1.47529281905711,2.48343071674259,1.28440471990234,1.75817529888305,2.95082901678016,1.26235463602186,14.5133780931478,16.3984272604588,18.9572590004863,12.4263774935327,11.3627323782021,9.34152551603147,12.5491317519217,12.5670018901864,10.2774822266096,0.642642632843614,1.98716119291576,2.31485284767432,2.76907830901079,1.15479086080775,0,4.61283208694465,2.41858845571801,1.88605079755898,1.47650946440386,2.45948118355142,3.35956781118687,6.90714086007261,4.63446591900138,0.316036757935816,0,0,4.76615448055303,3.06103859853227,6.33857550535497,4.07240366560025,5.32020700926821,3.74574516964348,2.96188237083818,3.95804433848979,0.938686832254841,0,3.96951116498931,0.65954501176592,1.93757312035087,1.14594557363496,1.19372344003136,0.820704498725306,1.1659233465194,2.78137953015765,0,1.44470807574256,0.740778109478847,0.376736914009382,0,0,1.69978429993855,1.81936888020755,1.65839968565309,0,5.21954389408873,1.82987520414164,1.40406943068342,0.627264888043406,0.655087691238533,1.48350781023303,1.1571483801547,0.523511883968059,0.777689839750757,4.97071450469541,0,1.79419855252775,1.65458490457098,1.36115831840833,0.904118764344118,2.36538575687089,2.58185925020659,1.3020438484395,1.04859344425711,0.483168241652012,0.576060012515731,0.316011120628178,1.62180172232131,1.23253148597793,1.55904987573354,1.43221356533985,0.993406773906324,1.08175904567972,1.03382669022204,0.706765149637033,0.685861259894999,0.604957110821043,0.487289403698762,0.192423683280659,0.350630706544707,0.906921534460845,0,0.179427713218951,0.167884616364078,0.19318959403219,0.375364950902364,0.549454872801795,0,0,0,0.920650473014354,1.14579102687879,0.859265911718438,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,0,8.61434984948666,3.99024873401031,3.07320490357441,1.70174701947806,3.98265008993166,2.38996560985018,2.889207461421,2.26638562962784,1.92551525755089,1.26348605881899,1.52087579934144,1.88626341386076,1.49826411951812,1.85672941974121,1.37845125493472,2.38146845641537,1.85414921511769,1.54327376370964,0.824171801606613,2.64958056241915,2.74295401908332,2.30718548007139,1.1921809497366,2.32554266611726,2.07040636913727,2.36920902096694,1.64635175585495,2.10455769150274,2.44447404922551,5.05028044491965,1.54225523561426,1.57607171800902,2.45538625901814,1.70430525304563,2.70069255373598,6.24526444844865,2.8071793013449,2.36358159453128,2.86932498103265,2.8676884485537,2.31867835620421
|short_description=p2@Cdk2ap1
|short_description=p2@Cdk2ap1
}}
}}

Revision as of 22:35, 14 November 2012

Short description:p2@Cdk2ap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cdk2ap1_5end
Coexpression cluster:MCL_coexpression_mm9:1241
Association with transcript: -24bp_to_ENSMUST00000111472_5end
EntrezGene:Cdk2ap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cdk2ap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.88
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.41
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.72
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C310.52
Mouse Granule cells, donor2.CNhs12357.11731-123E321.16
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.09
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.80
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.25
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F94.16
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.48
epididymis, adult.CNhs10490.58-23B214.66
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C63.25
eyeball, embryo E14.CNhs10521.399-16E28.28
eyeball, embryo E15.CNhs10593.426-16C95.94
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E75.77
eyeball, neonate N02.CNhs11205.1551-44G84.12
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E29.92
forelimb, embryo E12.CNhs10600.359-14H26.05
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.40
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.96
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.55
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.57
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.28
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C76.34
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E35.22
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I88.61
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure4.36e-1195
ectoderm4.36e-1195
presumptive ectoderm4.36e-1195
nervous system2.32e-1075
central nervous system8.31e-1073
peripheral nervous system7.50e-0811
autonomic nervous system1.73e-079







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:124802266..124802311,-&oldid=2345924"