Personal tools

FFCP PHASE1:Mm9::chr10:127896295..127896304,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr10:127896295..127896304,+
|id=chr10:127896295..127896304,+
|ontology_enrichment_celltype=CL:0000117!4.48e-14!23;CL:0000337!4.48e-14!23;CL:0000540!2.84e-11!33;CL:0000047!2.84e-11!33;CL:0000031!2.84e-11!33;CL:0000404!2.84e-11!33;CL:0000221!3.66e-10!44;CL:0000133!3.66e-10!44;CL:0002319!1.13e-09!43;CL:0000393!4.22e-08!39;CL:0000211!4.22e-08!39;CL:0000055!8.01e-07!50
|ontology_enrichment_celltype=CL:0000117!4.48e-14!23;CL:0000337!4.48e-14!23;CL:0000540!2.84e-11!33;CL:0000047!2.84e-11!33;CL:0000031!2.84e-11!33;CL:0000404!2.84e-11!33;CL:0000221!3.66e-10!44;CL:0000133!3.66e-10!44;CL:0002319!1.13e-09!43;CL:0000393!4.22e-08!39;CL:0000211!4.22e-08!39;CL:0000055!8.01e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,7.51e-53,23;CL:0000337,7.51e-53,23;CL:0000540,9.20e-36,33;CL:0000047,9.20e-36,33;CL:0000031,9.20e-36,33;CL:0000404,9.20e-36,33;CL:0000393,1.04e-29,39;CL:0000211,1.04e-29,39;CL:0002319,1.35e-29,43;CL:0000221,7.73e-29,44;CL:0000133,7.73e-29,44;CL:0002609,1.09e-21,6;CL:0002321,1.02e-16,70;CL:0000723,6.32e-12,91;CL:0000048,6.32e-12,91;CL:0002608,6.48e-12,3;CL:0002613,1.87e-11,3;CL:0000120,3.02e-11,3;CL:0000034,6.01e-11,97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!9.86e-11!75;UBERON:0001016!9.86e-11!75;UBERON:0001017!7.20e-10!73;UBERON:0005743!7.20e-10!73;UBERON:0004121!4.25e-09!102;UBERON:0000924!4.25e-09!102;UBERON:0006601!4.25e-09!102;UBERON:0001049!4.87e-09!52;UBERON:0005068!4.87e-09!52;UBERON:0006241!4.87e-09!52;UBERON:0007135!4.87e-09!52;UBERON:0002346!5.19e-08!71;UBERON:0003075!5.19e-08!71;UBERON:0007284!5.19e-08!71;UBERON:0002020!6.97e-08!34;UBERON:0000033!7.23e-08!63;UBERON:0003056!1.76e-07!49;UBERON:0000955!2.82e-07!50;UBERON:0006238!2.82e-07!50;UBERON:0002616!3.93e-07!49
|ontology_enrichment_uberon=UBERON:0000073!9.86e-11!75;UBERON:0001016!9.86e-11!75;UBERON:0001017!7.20e-10!73;UBERON:0005743!7.20e-10!73;UBERON:0004121!4.25e-09!102;UBERON:0000924!4.25e-09!102;UBERON:0006601!4.25e-09!102;UBERON:0001049!4.87e-09!52;UBERON:0005068!4.87e-09!52;UBERON:0006241!4.87e-09!52;UBERON:0007135!4.87e-09!52;UBERON:0002346!5.19e-08!71;UBERON:0003075!5.19e-08!71;UBERON:0007284!5.19e-08!71;UBERON:0002020!6.97e-08!34;UBERON:0000033!7.23e-08!63;UBERON:0003056!1.76e-07!49;UBERON:0000955!2.82e-07!50;UBERON:0006238!2.82e-07!50;UBERON:0002616!3.93e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.96e-21,34;UBERON:0001017,1.13e-19,73;UBERON:0001016,4.84e-19,75;UBERON:0000073,6.38e-16,54;UBERON:0003528,7.75e-16,29;UBERON:0002791,7.75e-16,29;UBERON:0001893,7.75e-16,29;UBERON:0002420,1.03e-15,8;UBERON:0007245,1.03e-15,8;UBERON:0010009,1.03e-15,8;UBERON:0010011,1.03e-15,8;UBERON:0000454,1.03e-15,8;UBERON:0004121,1.08e-15,95;UBERON:0000924,1.08e-15,95;UBERON:0006601,1.08e-15,95;UBERON:0001049,2.18e-14,52;UBERON:0005068,2.18e-14,52;UBERON:0006241,2.18e-14,52;UBERON:0007135,2.18e-14,52;UBERON:0002346,1.21e-12,64;UBERON:0003075,1.21e-12,64;UBERON:0007284,1.21e-12,64;UBERON:0000369,1.26e-11,5;UBERON:0002435,1.26e-11,5;UBERON:0000204,1.26e-11,5;UBERON:0010082,1.26e-11,5;UBERON:0002780,3.47e-11,39;UBERON:0001890,3.47e-11,39;UBERON:0006240,3.47e-11,39;UBERON:0003080,7.55e-11,40;UBERON:0010371,1.13e-10,73;UBERON:0003056,6.28e-10,49;UBERON:0002616,3.90e-09,46;UBERON:0002240,5.39e-09,6;UBERON:0005174,5.39e-09,6;UBERON:0001137,5.39e-09,6;UBERON:0000955,6.83e-09,47;UBERON:0006238,6.83e-09,47;UBERON:0010314,8.83e-08,92
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0.666219523631325,0,0.699561878128147,0.157731082679119,0,0,0.765389611359628,0.0992909512008853,0,0.159992422793407,0,0,0,0.646413698057667,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0.418531630736908,0,1.0470474879476,0.588231488031014,0,0,0,0.101376931219515,0.183546752161682,0,0.65407546914134,0.219686182734472,0,0,1.43752564364972,0,0,0,0,0,0,3.23706337375356,2.11596391708813,1.90149421051854,0.338844532069132,0,0,0,0,0,0,4.04389488003063,2.8351247049655,1.68259969081106,1.42825492201902,0.441737081903227,2.44981598429908,5.94241920313065,3.67687514644008,0,3.31987079021488,3.37934373163736,1.71452174049252,5.30628332893976,2.6045668527838,3.62937898701795,0.56276261003168,2.13917546887534,1.17851434189467,0.569486723196412,1.86399445825301,0.757261933331841,0.906858721281426,0.289864488701678,0,0,0.539703191637817,0,0,0.140444420131752,0.852151612890289,0,0,0.845060518660083,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0.239630249011841,0,0.381210681219194,0.748953197024114,0.915001205637253,1.7591609295801,0.173824320192276,0.767146371990992,0.83115217823824,0.648965052271031,0.305518091550949,0.248813941220186,0,0.210441855886474,0.130120442962704,0.229902104433473,0,0.60281927134286,0.612328492361951,0.768682321709099,1.12442069471675,0.258703370739016,1.07783996466421,0.567318240503458,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0.772043721344145,0.284163499395593,0.414251545071004,0.234526059981096,0.36012412292203,0.946978942340841,0,0.308534225774757,0,0.536546802799238,0.350296027101508,0.329119699826961,0,0.162137619091711,0,0,0.134206418760372,0.630869845692382,0.823236899034275,0,0,0,0.464473343720877,0,0.403367049246685,0.444756087689741,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0.569003702859245,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.280543279561274,0.189709611372772,0,0.31399745568275,0,0,0,0,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0.704070744865506,0,0,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0,0,0.54390568381871,0,0.275936746304732,0,0.586058432961016,0,0.504941854408746,0.631016438832513,0,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0,0,0.325773918707152,0,0,0.485561272309963,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0,0.258717367565509,0.214337035031592,0.354680467284547,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0,0.328281799490123,0.291480836629851,1.66882771809459,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0.849892149969277,0.419854356970974,0,0,0.474503990371703,0.406638934253697,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0.598066184175915,0,0.388902376688095,0.129159823477731,0.675824501963113,0.234714477291508,0,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0.79472541912506,0.600977247599844,0.590758108698309,0.201932899896295,0.304827226619999,0.302478555410522,0.0974578807397524,0.288635524920988,0.233753804363138,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0,0.31136204275253,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0.367687016900028,0,0,0,0,0,0.188626341386076,0.37456602987953,0.640251524048693,0.516919220600519,0.476293691283074,0.811190281613988,0.578727661391115,0.824171801606613,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.548783918618318,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.77468420592983,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0.231867835620421
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0.666219523631325,0,0.699561878128147,0.157731082679119,0,0,0.765389611359628,0.0992909512008853,0,0.159992422793407,0,0,0,0.646413698057667,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0.418531630736908,0,1.0470474879476,0.588231488031014,0,0,0,0.101376931219515,0.183546752161682,0,0.65407546914134,0.219686182734472,0,0,1.43752564364972,0,0,0,0,0,0,3.23706337375356,2.11596391708813,1.90149421051854,0.338844532069132,0,0,0,0,0,0,4.04389488003063,2.8351247049655,1.68259969081106,1.42825492201902,0.441737081903227,2.44981598429908,5.94241920313065,3.67687514644008,0,3.31987079021488,3.37934373163736,1.71452174049252,5.30628332893976,2.6045668527838,3.62937898701795,0.56276261003168,2.13917546887534,1.17851434189467,0.569486723196412,1.86399445825301,0.757261933331841,0.906858721281426,0.289864488701678,0,0,0.539703191637817,0,0,0.140444420131752,0.852151612890289,0,0,0.845060518660083,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0.239630249011841,0,0.381210681219194,0.748953197024114,0.915001205637253,1.7591609295801,0.173824320192276,0.767146371990992,0.83115217823824,0.648965052271031,0.305518091550949,0.248813941220186,0,0.210441855886474,0.130120442962704,0.229902104433473,0,0.60281927134286,0.612328492361951,0.768682321709099,1.12442069471675,0.258703370739016,1.07783996466421,0.567318240503458,0.527853372491847,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0.772043721344145,0.284163499395593,0.414251545071004,0.234526059981096,0.36012412292203,0.946978942340841,0,0.308534225774757,0,0.536546802799238,0.350296027101508,0.329119699826961,0,0.162137619091711,0,0,0.134206418760372,0.630869845692382,0.823236899034275,0,0,0,0.464473343720877,0,0.403367049246685,0.444756087689741,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0.569003702859245,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.280543279561274,0.189709611372772,0,0.31399745568275,0,0,0,0,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0.704070744865506,0,0,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.345369963731791,0,0,0.54390568381871,0,0.275936746304732,0,0.586058432961016,0,0.504941854408746,0.631016438832513,0,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0,0,0.325773918707152,0,0,0.485561272309963,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0,0.258717367565509,0.214337035031592,0.354680467284547,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0,0.328281799490123,0.291480836629851,1.66882771809459,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0.228778173206523,0.849892149969277,0.419854356970974,0,0,0.474503990371703,0.406638934253697,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0.56369293868419,0.598066184175915,0,0.388902376688095,0.129159823477731,0.675824501963113,0.234714477291508,0,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0.79472541912506,0.600977247599844,0.590758108698309,0.201932899896295,0.304827226619999,0.302478555410522,0.0974578807397524,0.288635524920988,0.233753804363138,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0,0.31136204275253,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0.367687016900028,0,0,0,0,0,0.188626341386076,0.37456602987953,0.640251524048693,0.516919220600519,0.476293691283074,0.811190281613988,0.578727661391115,0.824171801606613,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.548783918618318,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.77468420592983,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0.231867835620421
|short_description=p6@Smarcc2
|short_description=p6@Smarcc2
}}
}}

Revision as of 03:44, 15 November 2012

Short description:p6@Smarcc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Smarcc2_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 3bp_to_ENSMUST00000026433, ENSMUST00000099131, ENSMUST00000105235, NM_001114096, NM_001114097, NM_198160, uc007hmw.2, uc007hmx.2, uc007hmy.2_5end
EntrezGene:Smarcc2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Smarcc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter9.96e-2134
central nervous system1.13e-1973
nervous system4.84e-1975
regional part of nervous system6.38e-1654
brain grey matter7.75e-1629
regional part of telencephalon7.75e-1629
telencephalon7.75e-1629
basal ganglion1.03e-158
nuclear complex of neuraxis1.03e-158
aggregate regional part of brain1.03e-158
collection of basal ganglia1.03e-158
cerebral subcortex1.03e-158
ectoderm-derived structure1.08e-1595
ectoderm1.08e-1595
presumptive ectoderm1.08e-1595
neural tube2.18e-1452
neural rod2.18e-1452
future spinal cord2.18e-1452
neural keel2.18e-1452
neurectoderm1.21e-1264
neural plate1.21e-1264
presumptive neural plate1.21e-1264
corpus striatum1.26e-115
striatum1.26e-115
ventral part of telencephalon1.26e-115
future corpus striatum1.26e-115
regional part of forebrain3.47e-1139
forebrain3.47e-1139
future forebrain3.47e-1139
anterior neural tube7.55e-1140
ecto-epithelium1.13e-1073
pre-chordal neural plate6.28e-1049
regional part of brain3.90e-0946
spinal cord5.39e-096
dorsal region element5.39e-096
dorsum5.39e-096
brain6.83e-0947
future brain6.83e-0947
structure with developmental contribution from neural crest8.83e-0892







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:127896295..127896304,%2B&oldid=2359594"