FFCP PHASE1:Hg19::chr16:55522536..55522599,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.62e-41!180;CL:0000057!1.43e-19!75;CL:0000680!9.26e-18!57;CL:0000056!9.26e-18!57;CL:0000355!9.26e-18!57;CL:0000187!2.26e-16!54;CL:0000183!5.96e-16!59;CL:0000393!1.00e-14!60;CL:0000211!1.00e-14!60;CL:0000192!4.02e-14!42;CL:0000514!4.02e-14!42;CL:0000222!5.97e-11!119;CL:0000359!6.23e-11!32;CL:0002371!1.98e-09!591;CL:0002334!1.02e-08!12;CL:0000144!2.65e-08!625;CL:0000048!5.38e-08!430;CL:0002620!1.23e-07!23;CL:0000723!3.46e-07!436;CL:0000220!8.17e-07!246;CL:0000499!9.79e-07!27 | |ontology_enrichment_celltype=CL:0000055!2.62e-41!180;CL:0000057!1.43e-19!75;CL:0000680!9.26e-18!57;CL:0000056!9.26e-18!57;CL:0000355!9.26e-18!57;CL:0000187!2.26e-16!54;CL:0000183!5.96e-16!59;CL:0000393!1.00e-14!60;CL:0000211!1.00e-14!60;CL:0000192!4.02e-14!42;CL:0000514!4.02e-14!42;CL:0000222!5.97e-11!119;CL:0000359!6.23e-11!32;CL:0002371!1.98e-09!591;CL:0002334!1.02e-08!12;CL:0000144!2.65e-08!625;CL:0000048!5.38e-08!430;CL:0002620!1.23e-07!23;CL:0000723!3.46e-07!436;CL:0000220!8.17e-07!246;CL:0000499!9.79e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.89e-11;12!CL:0000359;1.14e-10;32!CL:0000192;7.57e-10;43!CL:0000057;9.58e-09;73!CL:0002620;1.23e-08;23!CL:0000048;1.25e-08;58!CL:0000723;2.26e-08;61!CL:0000134;2.39e-08;55!CL:0000499;2.89e-08;28!CL:0002320;4.15e-08;188!CL:0002539;1.09e-07;10!CL:0000187;8.77e-07;55 | |ontology_enrichment_celltype_v019=CL:0002334;1.89e-11;12!CL:0000359;1.14e-10;32!CL:0000192;7.57e-10;43!CL:0000057;9.58e-09;73!CL:0002620;1.23e-08;23!CL:0000048;1.25e-08;58!CL:0000723;2.26e-08;61!CL:0000134;2.39e-08;55!CL:0000499;2.89e-08;28!CL:0002320;4.15e-08;188!CL:0002539;1.09e-07;10!CL:0000187;8.77e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.22e-22,76;CL:0000048,2.06e-16,427;CL:0000723,1.45e-15,433;CL:0000680,1.63e-14,58;CL:0000056,1.63e-14,58;CL:0000355,1.63e-14,58;CL:0000034,1.77e-14,441;CL:0000192,3.16e-13,43;CL:0000514,3.16e-13,43;CL:0000187,7.32e-13,55;CL:0002334,1.58e-11,12;CL:0000393,3.28e-11,61;CL:0000211,3.28e-11,61;CL:0000359,1.01e-10,32;CL:0002620,8.96e-09,23;CL:0000499,2.57e-08,28;CL:0002539,9.53e-08,10;CL:0002320,3.15e-07,361;CL:0000134,6.73e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;7.57e-10;43!CL:0000355;4.62e-07;58 | |ontology_enrichment_development_v019=CL:0000514;7.57e-10;43!CL:0000355;4.62e-07;58 | ||
|ontology_enrichment_disease=DOID:2394!7.61e-08!14 | |ontology_enrichment_disease=DOID:2394!7.61e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.44e-10;14 | |ontology_enrichment_disease_v019=DOID:2394;1.44e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.22e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.03e-17!82;UBERON:0000914!1.20e-17!83;UBERON:0002329!1.20e-17!83;UBERON:0003077!1.20e-17!83;UBERON:0003059!1.20e-17!83;UBERON:0007282!1.20e-17!83;UBERON:0009618!1.20e-17!83;UBERON:0007285!1.20e-17!83;UBERON:0004290!1.85e-17!70;UBERON:0002385!7.58e-17!63;UBERON:0001015!7.58e-17!63;UBERON:0000383!7.58e-17!63;UBERON:0001134!8.32e-17!61;UBERON:0002036!8.32e-17!61;UBERON:0003082!8.32e-17!61;UBERON:0004872!1.96e-16!84;UBERON:0001637!4.53e-13!42;UBERON:0003509!4.53e-13!42;UBERON:0004572!4.53e-13!42;UBERON:0005256!1.52e-12!143;UBERON:0001981!1.04e-11!60;UBERON:0007500!1.04e-11!60;UBERON:0004537!1.04e-11!60;UBERON:0006965!1.04e-11!60;UBERON:0002049!3.64e-11!79;UBERON:0007798!3.64e-11!79;UBERON:0004573!6.24e-11!33;UBERON:0004571!6.24e-11!33;UBERON:0001009!3.83e-10!113;UBERON:0000490!4.47e-10!138;UBERON:0000055!4.98e-10!69;UBERON:0004535!1.09e-09!110;UBERON:0003914!2.15e-09!118;UBERON:0002100!3.50e-09!216;UBERON:0000947!1.63e-08!21;UBERON:0010191!1.63e-08!21;UBERON:0002199!1.07e-07!45;UBERON:0002416!1.07e-07!45;UBERON:0001135!1.64e-07!15;UBERON:0000468!2.14e-07!659;UBERON:0000475!2.65e-07!365 | |ontology_enrichment_uberon=UBERON:0000486!1.03e-17!82;UBERON:0000914!1.20e-17!83;UBERON:0002329!1.20e-17!83;UBERON:0003077!1.20e-17!83;UBERON:0003059!1.20e-17!83;UBERON:0007282!1.20e-17!83;UBERON:0009618!1.20e-17!83;UBERON:0007285!1.20e-17!83;UBERON:0004290!1.85e-17!70;UBERON:0002385!7.58e-17!63;UBERON:0001015!7.58e-17!63;UBERON:0000383!7.58e-17!63;UBERON:0001134!8.32e-17!61;UBERON:0002036!8.32e-17!61;UBERON:0003082!8.32e-17!61;UBERON:0004872!1.96e-16!84;UBERON:0001637!4.53e-13!42;UBERON:0003509!4.53e-13!42;UBERON:0004572!4.53e-13!42;UBERON:0005256!1.52e-12!143;UBERON:0001981!1.04e-11!60;UBERON:0007500!1.04e-11!60;UBERON:0004537!1.04e-11!60;UBERON:0006965!1.04e-11!60;UBERON:0002049!3.64e-11!79;UBERON:0007798!3.64e-11!79;UBERON:0004573!6.24e-11!33;UBERON:0004571!6.24e-11!33;UBERON:0001009!3.83e-10!113;UBERON:0000490!4.47e-10!138;UBERON:0000055!4.98e-10!69;UBERON:0004535!1.09e-09!110;UBERON:0003914!2.15e-09!118;UBERON:0002100!3.50e-09!216;UBERON:0000947!1.63e-08!21;UBERON:0010191!1.63e-08!21;UBERON:0002199!1.07e-07!45;UBERON:0002416!1.07e-07!45;UBERON:0001135!1.64e-07!15;UBERON:0000468!2.14e-07!659;UBERON:0000475!2.65e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.33e-12;33!UBERON:0004571;1.33e-12;33!UBERON:0001637;4.03e-10;42!UBERON:0003509;4.03e-10;42!UBERON:0004572;4.03e-10;42!UBERON:0000947;4.55e-10;21!UBERON:0010191;4.55e-10;21!UBERON:0002384;1.40e-08;198!UBERON:0004457;9.34e-08;9!UBERON:0000042;9.34e-08;9!UBERON:0004237;1.09e-07;10!UBERON:0004695;1.09e-07;10!UBERON:0002111;1.09e-07;10!UBERON:0004178;1.09e-07;10!UBERON:0001135;2.18e-07;15!UBERON:0002199;5.64e-07;46!UBERON:0002416;5.64e-07;46!UBERON:0003688;6.38e-07;6!UBERON:0002358;6.38e-07;6!UBERON:0003684;6.38e-07;6!UBERON:0001178;6.38e-07;6!UBERON:0002385;7.94e-07;31!UBERON:0001015;7.94e-07;31!UBERON:0000383;7.94e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0004573;1.33e-12;33!UBERON:0004571;1.33e-12;33!UBERON:0001637;4.03e-10;42!UBERON:0003509;4.03e-10;42!UBERON:0004572;4.03e-10;42!UBERON:0000947;4.55e-10;21!UBERON:0010191;4.55e-10;21!UBERON:0002384;1.40e-08;198!UBERON:0004457;9.34e-08;9!UBERON:0000042;9.34e-08;9!UBERON:0004237;1.09e-07;10!UBERON:0004695;1.09e-07;10!UBERON:0002111;1.09e-07;10!UBERON:0004178;1.09e-07;10!UBERON:0001135;2.18e-07;15!UBERON:0002199;5.64e-07;46!UBERON:0002416;5.64e-07;46!UBERON:0003688;6.38e-07;6!UBERON:0002358;6.38e-07;6!UBERON:0003684;6.38e-07;6!UBERON:0001178;6.38e-07;6!UBERON:0002385;7.94e-07;31!UBERON:0001015;7.94e-07;31!UBERON:0000383;7.94e-07;31 | ||
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| ||
|short_description=p4@MMP2 | |short_description=p4@MMP2 | ||
}} | }} |
Revision as of 04:15, 16 November 2012
Short description: | p4@MMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MMP2_5end |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | 21bp_to_DQ385623_5end |
EntrezGene: | MMP2 |
HGNC: | 7166 |
UniProt: | Q2EF79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.22e-22 | 76 |
multi fate stem cell | 2.06e-16 | 427 |
somatic stem cell | 1.45e-15 | 433 |
muscle precursor cell | 1.63e-14 | 58 |
myoblast | 1.63e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.63e-14 | 58 |
stem cell | 1.77e-14 | 441 |
smooth muscle cell | 3.16e-13 | 43 |
smooth muscle myoblast | 3.16e-13 | 43 |
muscle cell | 7.32e-13 | 55 |
preadipocyte | 1.58e-11 | 12 |
electrically responsive cell | 3.28e-11 | 61 |
electrically active cell | 3.28e-11 | 61 |
vascular associated smooth muscle cell | 1.01e-10 | 32 |
skin fibroblast | 8.96e-09 | 23 |
stromal cell | 2.57e-08 | 28 |
aortic smooth muscle cell | 9.53e-08 | 10 |
connective tissue cell | 3.15e-07 | 361 |
mesenchymal cell | 6.73e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.22e-10 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.