FFCP PHASE1:Hg19::chr13:38154048..38154108,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!3.19e-28!180;CL:0000057!1.14e-17!75;CL:0000680!3.16e-15!57;CL:0000056!3.16e-15!57;CL:0000355!3.16e-15!57;CL:0000187!1.53e-14!54;CL:0000183!2.98e-12!59;CL:0002494!6.14e-12!16;CL:0000393!7.59e-12!60;CL:0000211!7.59e-12!60;CL:0002334!1.01e-11!12;CL:0000723!6.06e-11!436;CL:0000048!6.27e-11!430;CL:0000034!4.93e-10!444;CL:0000192!2.63e-09!42;CL:0000514!2.63e-09!42;CL:0000359!1.37e-08!32;CL:0000222!9.26e-08!119 | |ontology_enrichment_celltype=CL:0000055!3.19e-28!180;CL:0000057!1.14e-17!75;CL:0000680!3.16e-15!57;CL:0000056!3.16e-15!57;CL:0000355!3.16e-15!57;CL:0000187!1.53e-14!54;CL:0000183!2.98e-12!59;CL:0002494!6.14e-12!16;CL:0000393!7.59e-12!60;CL:0000211!7.59e-12!60;CL:0002334!1.01e-11!12;CL:0000723!6.06e-11!436;CL:0000048!6.27e-11!430;CL:0000034!4.93e-10!444;CL:0000192!2.63e-09!42;CL:0000514!2.63e-09!42;CL:0000359!1.37e-08!32;CL:0000222!9.26e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0002334;5.35e-16;12!CL:0002494;2.27e-10;16!CL:0002548;1.31e-08;6!CL:0000134;7.88e-08;55!CL:1000306;7.13e-07;4!CL:0002547;7.13e-07;4 | |ontology_enrichment_celltype_v019=CL:0002334;5.35e-16;12!CL:0002494;2.27e-10;16!CL:0002548;1.31e-08;6!CL:0000134;7.88e-08;55!CL:1000306;7.13e-07;4!CL:0002547;7.13e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.28e-20,76;CL:0002334,4.22e-16,12;CL:0000048,1.21e-11,427;CL:0000723,1.49e-11,433;CL:0000034,7.59e-11,441;CL:0002494,2.28e-10,16;CL:0002548,1.40e-08,6;CL:0000680,2.67e-08,58;CL:0000056,2.67e-08,58;CL:0000355,2.67e-08,58;CL:0000187,2.09e-07,55;CL:1000306,7.79e-07,4;CL:0002547,7.79e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!4.81e-09!14 | |ontology_enrichment_disease=DOID:2394!4.81e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.18e-11;14 | |ontology_enrichment_disease_v019=DOID:2394;4.18e-11;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,3.90e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.62e-16!61;UBERON:0002036!3.62e-16!61;UBERON:0003082!3.62e-16!61;UBERON:0002385!3.39e-15!63;UBERON:0001015!3.39e-15!63;UBERON:0000383!3.39e-15!63;UBERON:0000914!1.08e-13!83;UBERON:0002329!1.08e-13!83;UBERON:0003077!1.08e-13!83;UBERON:0003059!1.08e-13!83;UBERON:0007282!1.08e-13!83;UBERON:0009618!1.08e-13!83;UBERON:0007285!1.08e-13!83;UBERON:0004290!1.11e-13!70;UBERON:0000486!2.22e-11!82;UBERON:0000948!5.85e-11!24;UBERON:0005498!5.85e-11!24;UBERON:0004140!5.85e-11!24;UBERON:0009881!5.85e-11!24;UBERON:0004141!5.85e-11!24;UBERON:0003084!5.85e-11!24;UBERON:0007005!5.85e-11!24;UBERON:0004139!5.85e-11!24;UBERON:0004291!5.85e-11!24;UBERON:0001637!5.92e-11!42;UBERON:0003509!5.92e-11!42;UBERON:0004572!5.92e-11!42;UBERON:0004872!1.14e-10!84;UBERON:0007100!6.76e-10!27;UBERON:0000490!8.45e-08!138;UBERON:0004573!1.44e-07!33;UBERON:0004571!1.44e-07!33;UBERON:0001981!8.51e-07!60;UBERON:0007500!8.51e-07!60;UBERON:0004537!8.51e-07!60;UBERON:0006965!8.51e-07!60 | |ontology_enrichment_uberon=UBERON:0001134!3.62e-16!61;UBERON:0002036!3.62e-16!61;UBERON:0003082!3.62e-16!61;UBERON:0002385!3.39e-15!63;UBERON:0001015!3.39e-15!63;UBERON:0000383!3.39e-15!63;UBERON:0000914!1.08e-13!83;UBERON:0002329!1.08e-13!83;UBERON:0003077!1.08e-13!83;UBERON:0003059!1.08e-13!83;UBERON:0007282!1.08e-13!83;UBERON:0009618!1.08e-13!83;UBERON:0007285!1.08e-13!83;UBERON:0004290!1.11e-13!70;UBERON:0000486!2.22e-11!82;UBERON:0000948!5.85e-11!24;UBERON:0005498!5.85e-11!24;UBERON:0004140!5.85e-11!24;UBERON:0009881!5.85e-11!24;UBERON:0004141!5.85e-11!24;UBERON:0003084!5.85e-11!24;UBERON:0007005!5.85e-11!24;UBERON:0004139!5.85e-11!24;UBERON:0004291!5.85e-11!24;UBERON:0001637!5.92e-11!42;UBERON:0003509!5.92e-11!42;UBERON:0004572!5.92e-11!42;UBERON:0004872!1.14e-10!84;UBERON:0007100!6.76e-10!27;UBERON:0000490!8.45e-08!138;UBERON:0004573!1.44e-07!33;UBERON:0004571!1.44e-07!33;UBERON:0001981!8.51e-07!60;UBERON:0007500!8.51e-07!60;UBERON:0004537!8.51e-07!60;UBERON:0006965!8.51e-07!60 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;7.41e-08;22!UBERON:0004797;7.13e-07;4!UBERON:0000415;7.13e-07;4!UBERON:0007240;7.13e-07;4!UBERON:0005742;7.13e-07;4!UBERON:0005734;7.13e-07;4!UBERON:0004664;7.13e-07;4!UBERON:0004663;7.13e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000948;7.41e-08;22!UBERON:0004797;7.13e-07;4!UBERON:0000415;7.13e-07;4!UBERON:0007240;7.13e-07;4!UBERON:0005742;7.13e-07;4!UBERON:0005734;7.13e-07;4!UBERON:0004664;7.13e-07;4!UBERON:0004663;7.13e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,9.42e-10,24;UBERON:0005498,9.42e-10,24;UBERON:0004140,9.42e-10,24;UBERON:0009881,9.42e-10,24;UBERON:0004141,9.42e-10,24;UBERON:0003084,9.42e-10,24;UBERON:0007005,9.42e-10,24;UBERON:0004139,9.42e-10,24;UBERON:0004291,9.42e-10,24;UBERON:0001134,6.00e-09,62;UBERON:0002036,6.00e-09,62;UBERON:0003082,6.00e-09,62;UBERON:0002385,1.90e-08,64;UBERON:0001015,1.90e-08,64;UBERON:0000383,1.90e-08,64;UBERON:0007100,3.17e-08,27;UBERON:0004872,2.11e-07,83;UBERON:0007524,2.22e-07,73;UBERON:0001637,5.61e-07,42;UBERON:0003509,5.61e-07,42;UBERON:0004572,5.61e-07,42;UBERON:0002329,6.08e-07,71;UBERON:0003059,6.08e-07,71;UBERON:0007282,6.08e-07,71;UBERON:0004290,6.08e-07,71;UBERON:0009618,6.08e-07,71;UBERON:0000415,7.79e-07,4;UBERON:0007240,7.79e-07,4;UBERON:0005742,7.79e-07,4;UBERON:0005734,7.79e-07,4;UBERON:0004664,7.79e-07,4;UBERON:0004663,7.79e-07,4;UBERON:0003077,9.37e-07,72;UBERON:0007285,9.37e-07,72 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.845726424575827,2.00146596706261,2.23480547213644,3.48935409640147,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,1.20538905604795,1.46062018077475,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,8.04841031644363,2.9408389224012,3.61439152384566,3.00802746381534,1.59331170856906,0.795285947051099,4.86634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25849830862972,0.825354125820202,0.417989933073621,0,0,0.33472061276467,0,0,0,0,8.1014194788176,0,0,0,0,0,0,0,0,0,23.8546536813753,4.30543739659571,6.3556406790345,22.3732564184075,4.61068896857864,2.24271040056923,5.33744978648525,8.14002909776628,1.55605517699883,4.58016285036939,8.3365570587864,0,4.03323147135999,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0.336672227908132,0,0,0.877955241761676,3.37136575378922,0.45071417671979,14.1790228950026,1.79389635688862,5.33893472046419,3.39091041855299,1.50045548042201,1.33968288009971,4.89517026086695,1.67505170698431,0.337552664482532,0.194874010322397,4.79624171063818,1.65689817556139,0,2.4850671476163,1.5112814734146,1.01736355386293,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,1.31700342490351,0,0.100528972411631,0,0,0,0,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,4.91232519879556,0,3.381211010224,1.32969058292435,1.04007436911366,0,0,0,1.57275793023962,0,0,2.28015329005615,0.710783897485092,0,22.3065139024094,8.71533458600294,37.7897906668176,0,0,0,8.38686994220539,5.7430967917057,0,4.77778312003011,0,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,13.7260768610333,18.735043823702,4.57337003598411,1.17141414992713,0.300946099727719,2.27407504055985,2.0694614258501,4.64957918974806,0.737476674166813,0.260650843404249,0,0,0,0,0,0,0,0,21.089163664596,8.44040853084343,14.8749850049529,5.25370511948374,8.18731598506726,18.9807626949457,1.48418066444991,1.54209693802656,7.99027763909072,1.64254312027618,3.63478100428535,4.29978400301849,0,0,0,3.4444334449382,2.54927635209404,1.70461739447251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,1.45006077438183,0.924291702687866,1.22802939780904,0.964856007391714,0.644521469209642,1.30515024522806,0.852266274161009,8.27997931514657,0.826424576804891,0.384380134730212,0,0,0,9.12955805808856,0,0.308033580176089,1.06461206063404,0,0.74129687641568,3.43499728180779,0,0.949138274156178,0.762520775695299,0,0,0.318203247925937,0.78494864019923,1.97859703341646,4.66712950551293,2.12062324222236,0.202182481573316,4.75530963519025,0.421258456238981,0,4.14312932373184,0,1.63799893689583,20.7865984971958,2.26016233240486,0,1.99031692572366,0.438450885253763,0,0,1.42037263873893,0,0.281695602532241,0.286822704408103,0,2.49669736036875,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,10.5753459805015,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.683652335082007,0,0,0,0.31900115973192,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,1.60515529459758,0,0,0,0,0.789168805698781,3.62972148145992,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0.0882561266915003,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.418411385249333,0,0,0,0,0,0,0,1.67569440763353,0,0,0,0,0.223171457441873,0.403100834920358,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.597019211547496,4.67426619694449,11.0961172300523,1.32582103692562,1.76097531226803,0.889811221596536,2.97492088916001,0.151230923763239,1.24349760466224,0.887130899937803,0.477890301491107,1.79921244865442,3.26052209440145,3.31764966272684,22.8623874519876,7.30443086536427,8.1139108858498,34.2724690951916,3.66183659884195,2.36403256963327,5.15570673803945,0,5.17524655308201,1.20008329398946,17.5131809643224,15.1537269944664,0,0,0,0,16.5495325623959,0.231522474323834,2.44736704506468,1.61179956973339,0,2.63140859494449,0,0.192914038270915,0,0,0,0,0,0,0,0,2.6208787907713,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.90412181829572,0,0,16.5757693534621,0,0,0,0,0,0,0,0,0,0,0,0,0,2.288292572803,0,0,0.0752103283492573,0.40341013740704,0,0,4.09429793775242,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,1.20041606606193,0,0,0,0,0,0,0,6.39211104356647,0,0,0,0,9.99676258165877,0,1.60342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| ||
|short_description=p@chr13:38154048..38154108,- | |short_description=p@chr13:38154048..38154108,- | ||
}} | }} |
Revision as of 23:10, 17 November 2012
Short description: | p@chr13:38154048..38154108, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:38154048..38154108, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.28e-20 | 76 |
preadipocyte | 4.22e-16 | 12 |
multi fate stem cell | 1.21e-11 | 427 |
somatic stem cell | 1.49e-11 | 433 |
stem cell | 7.59e-11 | 441 |
cardiocyte | 2.28e-10 | 16 |
cardiac fibroblast | 1.40e-08 | 6 |
muscle precursor cell | 2.67e-08 | 58 |
myoblast | 2.67e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.67e-08 | 58 |
muscle cell | 2.09e-07 | 55 |
fibroblast of tunica adventitia of artery | 7.79e-07 | 4 |
fibroblast of the aortic adventitia | 7.79e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart | 9.42e-10 | 24 |
primitive heart tube | 9.42e-10 | 24 |
primary heart field | 9.42e-10 | 24 |
anterior lateral plate mesoderm | 9.42e-10 | 24 |
heart tube | 9.42e-10 | 24 |
heart primordium | 9.42e-10 | 24 |
cardiac mesoderm | 9.42e-10 | 24 |
cardiogenic plate | 9.42e-10 | 24 |
heart rudiment | 9.42e-10 | 24 |
skeletal muscle tissue | 6.00e-09 | 62 |
striated muscle tissue | 6.00e-09 | 62 |
myotome | 6.00e-09 | 62 |
muscle tissue | 1.90e-08 | 64 |
musculature | 1.90e-08 | 64 |
musculature of body | 1.90e-08 | 64 |
primary circulatory organ | 3.17e-08 | 27 |
splanchnic layer of lateral plate mesoderm | 2.11e-07 | 83 |
dense mesenchyme tissue | 2.22e-07 | 73 |
artery | 5.61e-07 | 42 |
arterial blood vessel | 5.61e-07 | 42 |
arterial system | 5.61e-07 | 42 |
somite | 6.08e-07 | 71 |
presomitic mesoderm | 6.08e-07 | 71 |
presumptive segmental plate | 6.08e-07 | 71 |
dermomyotome | 6.08e-07 | 71 |
trunk paraxial mesoderm | 6.08e-07 | 71 |
artery wall | 7.79e-07 | 4 |
tunica adventitia of artery | 7.79e-07 | 4 |
adventitia | 7.79e-07 | 4 |
tunica adventitia of blood vessel | 7.79e-07 | 4 |
aorta tunica adventitia | 7.79e-07 | 4 |
aorta wall | 7.79e-07 | 4 |
paraxial mesoderm | 9.37e-07 | 72 |
presumptive paraxial mesoderm | 9.37e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.90e-11 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.