FFCP PHASE1:Hg19::chr11:47373328..47373338,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.18e-34;1!UBERON:0000358;5.97e-34;1!UBERON:0004140;5.97e-34;1!UBERON:0005062;1.17e-33;4!UBERON:0007284;1.17e-33;4!UBERON:0006603;5.61e-08;65 | |ontology_enrichment_development_v019=UBERON:0010227;2.18e-34;1!UBERON:0000358;5.97e-34;1!UBERON:0004140;5.97e-34;1!UBERON:0005062;1.17e-33;4!UBERON:0007284;1.17e-33;4!UBERON:0006603;5.61e-08;65 | ||
|ontology_enrichment_disease=DOID:114!4.00e-50!2;DOID:178!9.79e-26!1;DOID:326!9.79e-26!1;DOID:3978!9.79e-26!1;DOID:3394!9.79e-26!1;DOID:5844!9.79e-26!1;DOID:1287!1.11e-25!4 | |ontology_enrichment_disease=DOID:114!4.00e-50!2;DOID:178!9.79e-26!1;DOID:326!9.79e-26!1;DOID:3978!9.79e-26!1;DOID:3394!9.79e-26!1;DOID:5844!9.79e-26!1;DOID:1287!1.11e-25!4 | ||
|ontology_enrichment_disease_v019=DOID:114;5.96e-18;2!DOID:1287;1.17e-09;4 | |ontology_enrichment_disease_v019=DOID:114;5.96e-18;2!DOID:1287;1.17e-09;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,6.48e-18,2;DOID:1287,1.22e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.02e-44!27;UBERON:0003978!5.51e-34!3;UBERON:0009751!5.51e-34!3;UBERON:0000946!5.51e-34!3;UBERON:0002523!5.51e-34!3;UBERON:0005983!5.51e-34!3;UBERON:0002165!5.51e-34!3;UBERON:0002062!5.51e-34!3;UBERON:0007280!5.51e-34!3;UBERON:0002079!2.16e-26!1;UBERON:0002135!3.58e-26!1;UBERON:0002146!4.61e-26!1;UBERON:0005623!4.61e-26!1;UBERON:0003103!1.28e-17!69;UBERON:0000948!4.81e-17!24;UBERON:0005498!4.81e-17!24;UBERON:0004140!4.81e-17!24;UBERON:0009881!4.81e-17!24;UBERON:0004141!4.81e-17!24;UBERON:0003084!4.81e-17!24;UBERON:0007005!4.81e-17!24;UBERON:0004139!4.81e-17!24;UBERON:0004291!4.81e-17!24;UBERON:0002081!6.43e-14!2;UBERON:0002133!8.28e-14!2;UBERON:0001009!8.97e-11!113;UBERON:0004151!1.01e-09!3;UBERON:0002342!4.34e-08!14;UBERON:0005062!4.34e-08!14;UBERON:0007023!7.40e-08!115 | |ontology_enrichment_uberon=UBERON:0007100!1.02e-44!27;UBERON:0003978!5.51e-34!3;UBERON:0009751!5.51e-34!3;UBERON:0000946!5.51e-34!3;UBERON:0002523!5.51e-34!3;UBERON:0005983!5.51e-34!3;UBERON:0002165!5.51e-34!3;UBERON:0002062!5.51e-34!3;UBERON:0007280!5.51e-34!3;UBERON:0002079!2.16e-26!1;UBERON:0002135!3.58e-26!1;UBERON:0002146!4.61e-26!1;UBERON:0005623!4.61e-26!1;UBERON:0003103!1.28e-17!69;UBERON:0000948!4.81e-17!24;UBERON:0005498!4.81e-17!24;UBERON:0004140!4.81e-17!24;UBERON:0009881!4.81e-17!24;UBERON:0004141!4.81e-17!24;UBERON:0003084!4.81e-17!24;UBERON:0007005!4.81e-17!24;UBERON:0004139!4.81e-17!24;UBERON:0004291!4.81e-17!24;UBERON:0002081!6.43e-14!2;UBERON:0002133!8.28e-14!2;UBERON:0001009!8.97e-11!113;UBERON:0004151!1.01e-09!3;UBERON:0002342!4.34e-08!14;UBERON:0005062!4.34e-08!14;UBERON:0007023!7.40e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.91e-44;3!UBERON:0000946;1.91e-44;3!UBERON:0002079;2.18e-34;1!UBERON:0002135;5.97e-34;1!UBERON:0002146;5.97e-34;1!UBERON:0005623;5.97e-34;1!UBERON:0007100;2.65e-33;25!UBERON:0000948;1.82e-24;22!UBERON:0002081;5.96e-18;2!UBERON:0002133;9.86e-18;2!UBERON:0010313;3.71e-14;10!UBERON:0004151;1.96e-12;3!UBERON:0003103;4.81e-10;61 | |ontology_enrichment_uberon_v019=UBERON:0003978;1.91e-44;3!UBERON:0000946;1.91e-44;3!UBERON:0002079;2.18e-34;1!UBERON:0002135;5.97e-34;1!UBERON:0002146;5.97e-34;1!UBERON:0005623;5.97e-34;1!UBERON:0007100;2.65e-33;25!UBERON:0000948;1.82e-24;22!UBERON:0002081;5.96e-18;2!UBERON:0002133;9.86e-18;2!UBERON:0010313;3.71e-14;10!UBERON:0004151;1.96e-12;3!UBERON:0003103;4.81e-10;61 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.22e-44,3;UBERON:0009751,1.22e-44,3;UBERON:0000946,1.22e-44,3;UBERON:0002523,1.22e-44,3;UBERON:0005983,1.22e-44,3;UBERON:0002165,1.22e-44,3;UBERON:0002062,1.22e-44,3;UBERON:0007280,1.22e-44,3;UBERON:0002079,1.84e-34,1;UBERON:0002135,3.61e-34,1;UBERON:0002146,5.05e-34,1;UBERON:0005623,5.05e-34,1;UBERON:0007100,6.27e-31,27;UBERON:0000948,1.54e-22,24;UBERON:0005498,1.54e-22,24;UBERON:0004140,1.54e-22,24;UBERON:0009881,1.54e-22,24;UBERON:0004141,1.54e-22,24;UBERON:0003084,1.54e-22,24;UBERON:0007005,1.54e-22,24;UBERON:0004139,1.54e-22,24;UBERON:0004291,1.54e-22,24;UBERON:0004797,7.84e-20,7;UBERON:0002081,5.48e-18,2;UBERON:0010227,5.48e-18,2;UBERON:0002133,7.67e-18,2;UBERON:0010313,3.25e-14,10;UBERON:0002342,3.25e-14,10;UBERON:0005062,3.25e-14,10;UBERON:0003103,1.26e-12,68;UBERON:0004151,1.85e-12,3;UBERON:0001009,7.95e-08,112;UBERON:0004872,6.43e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79282401272254,2.52076466412852,0,0.798716001995964,3.004582336956,0.669514372325618,2.48578848200887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57347663186684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79282401272254,2.52076466412852,0,0.798716001995964,3.004582336956,0.669514372325618,2.48578848200887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57347663186684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr11:47373328..47373338,- | |short_description=p@chr11:47373328..47373338,- | ||
}} | }} |
Revision as of 14:24, 18 November 2012
Short description: | p@chr11:47373328..47373338, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:47373328..47373338, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 1.22e-44 | 3 |
cardiac mesenchyme | 1.22e-44 | 3 |
cardial valve | 1.22e-44 | 3 |
tunica intima | 1.22e-44 | 3 |
heart layer | 1.22e-44 | 3 |
endocardium | 1.22e-44 | 3 |
endocardial cushion | 1.22e-44 | 3 |
presumptive endocardium | 1.22e-44 | 3 |
left cardiac atrium | 1.84e-34 | 1 |
mitral valve | 3.61e-34 | 1 |
pulmonary valve | 5.05e-34 | 1 |
semi-lunar valve | 5.05e-34 | 1 |
primary circulatory organ | 6.27e-31 | 27 |
heart | 1.54e-22 | 24 |
primitive heart tube | 1.54e-22 | 24 |
primary heart field | 1.54e-22 | 24 |
anterior lateral plate mesoderm | 1.54e-22 | 24 |
heart tube | 1.54e-22 | 24 |
heart primordium | 1.54e-22 | 24 |
cardiac mesoderm | 1.54e-22 | 24 |
cardiogenic plate | 1.54e-22 | 24 |
heart rudiment | 1.54e-22 | 24 |
blood vessel layer | 7.84e-20 | 7 |
cardiac atrium | 5.48e-18 | 2 |
future cardiac atrium | 5.48e-18 | 2 |
atrioventricular valve | 7.67e-18 | 2 |
neural crest-derived structure | 3.25e-14 | 10 |
neural crest | 3.25e-14 | 10 |
neural fold | 3.25e-14 | 10 |
compound organ | 1.26e-12 | 68 |
cardiac chamber | 1.85e-12 | 3 |
circulatory system | 7.95e-08 | 112 |
splanchnic layer of lateral plate mesoderm | 6.43e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.48e-18 | 2 |
cardiovascular system disease | 1.22e-09 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.