FFCP PHASE1:Hg19::chr3:49625039..49625044,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002150!1.96e-10!3;CL:0000861!1.96e-10!3;CL:0000223!3.81e-09!59;CL:0000181!8.73e-07!12;CL:0000417!8.73e-07!12;CL:0000668!8.73e-07!12;CL:0000414!8.73e-07!12;CL:0000412!8.73e-07!12;CL:0000182!8.73e-07!12 | |ontology_enrichment_celltype=CL:0002150!1.96e-10!3;CL:0000861!1.96e-10!3;CL:0000223!3.81e-09!59;CL:0000181!8.73e-07!12;CL:0000417!8.73e-07!12;CL:0000668!8.73e-07!12;CL:0000414!8.73e-07!12;CL:0000412!8.73e-07!12;CL:0000182!8.73e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002127;9.91e-41;1!CL:0000911;9.91e-41;1!CL:0000814;9.91e-41;1!CL:0000222;2.21e-40;1!CL:0000084;2.13e-07;25 | |ontology_enrichment_celltype_v019=CL:0002127;9.91e-41;1!CL:0000911;9.91e-41;1!CL:0000814;9.91e-41;1!CL:0000222;2.21e-40;1!CL:0000084;2.13e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,9.91e-41,1;CL:0000914,9.91e-41,1;CL:0000911,9.91e-41,1;CL:0000814,9.91e-41,1;CL:0002042,9.91e-41,1;CL:0002039,9.91e-41,1;CL:0002040,9.91e-41,1;CL:0002041,9.91e-41,1;CL:0000893,3.81e-21,2;CL:0002489,3.81e-21,2;CL:0000809,3.81e-21,2;CL:0000808,3.81e-21,2;CL:0000894,3.81e-21,2;CL:0000806,3.81e-21,2;CL:0000807,3.81e-21,2;CL:0000805,3.81e-21,2;CL:0002425,3.81e-21,2;CL:0000084,2.14e-07,25;CL:0000827,2.14e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002425;3.81e-21;2 | |ontology_enrichment_development_v019=CL:0002425;3.81e-21;2 | ||
|ontology_enrichment_disease=DOID:0050687!3.52e-21!143;DOID:305!8.40e-19!106;DOID:162!2.09e-18!235;DOID:14566!8.38e-18!239;DOID:7!1.23e-15!39;DOID:4074!4.54e-08!2;DOID:4905!4.54e-08!2;DOID:3498!4.54e-08!2;DOID:4468!1.77e-07!2 | |ontology_enrichment_disease=DOID:0050687!3.52e-21!143;DOID:305!8.40e-19!106;DOID:162!2.09e-18!235;DOID:14566!8.38e-18!239;DOID:7!1.23e-15!39;DOID:4074!4.54e-08!2;DOID:4905!4.54e-08!2;DOID:3498!4.54e-08!2;DOID:4468!1.77e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1240;6.42e-07;39 | |ontology_enrichment_disease_v019=DOID:1240;6.42e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,5.37e-10,39;DOID:2531,8.01e-08,51;DOID:0060083,8.01e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0003343!1.17e-13!4;UBERON:0004785!1.17e-13!4;UBERON:0003729!6.11e-11!5;UBERON:0000974!2.23e-08!10 | |ontology_enrichment_uberon=UBERON:0003343!1.17e-13!4;UBERON:0004785!1.17e-13!4;UBERON:0003729!6.11e-11!5;UBERON:0000974!2.23e-08!10 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.80e-11,4;UBERON:0005058,2.80e-11,4;UBERON:0009113,2.80e-11,4;UBERON:0003295,2.80e-11,4;UBERON:0005562,2.80e-11,4;UBERON:0003351,5.92e-08,6;UBERON:0004177,5.38e-07,7;UBERON:0005057,5.38e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47463946379935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0,0,0,5.126395676764,0,0,0,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0.569710279235006,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0.476809736941136,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.881931576729399,0,0,0,0.19351266257817,0.146178634172371,0.246346371159628,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0.745515213392595,0,0,0,0.611989305817931,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.202210631562555,0,0.846733320657845,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0.592834895693833,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.371807292777007,0,0,1.10406443001755,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.471878893390961,0.183428598521679,0.346576998451015,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47463946379935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0,0,0,5.126395676764,0,0,0,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0.569710279235006,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0.476809736941136,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.881931576729399,0,0,0,0.19351266257817,0.146178634172371,0.246346371159628,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0.745515213392595,0,0,0,0.611989305817931,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.202210631562555,0,0.846733320657845,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0.592834895693833,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.371807292777007,0,0,1.10406443001755,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.471878893390961,0.183428598521679,0.346576998451015,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:49625039..49625044,- | |short_description=p@chr3:49625039..49625044,- | ||
}} | }} |
Revision as of 02:56, 19 November 2012
Short description: | p@chr3:49625039..49625044, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:49625039..49625044, - |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 9.91e-41 | 1 |
immature NK T cell | 9.91e-41 | 1 |
effector T cell | 9.91e-41 | 1 |
mature NK T cell | 9.91e-41 | 1 |
immature NK T cell stage IV | 9.91e-41 | 1 |
immature NK T cell stage I | 9.91e-41 | 1 |
immature NK T cell stage II | 9.91e-41 | 1 |
immature NK T cell stage III | 9.91e-41 | 1 |
thymocyte | 3.81e-21 | 2 |
double negative thymocyte | 3.81e-21 | 2 |
double-positive, alpha-beta thymocyte | 3.81e-21 | 2 |
DN4 thymocyte | 3.81e-21 | 2 |
DN1 thymic pro-T cell | 3.81e-21 | 2 |
DN2 thymocyte | 3.81e-21 | 2 |
DN3 thymocyte | 3.81e-21 | 2 |
immature single positive thymocyte | 3.81e-21 | 2 |
early T lineage precursor | 3.81e-21 | 2 |
T cell | 2.14e-07 | 25 |
pro-T cell | 2.14e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.80e-11 | 4 |
hemolymphoid system gland | 2.80e-11 | 4 |
thymic region | 2.80e-11 | 4 |
pharyngeal gland | 2.80e-11 | 4 |
thymus primordium | 2.80e-11 | 4 |
pharyngeal epithelium | 5.92e-08 | 6 |
hemopoietic organ | 5.38e-07 | 7 |
immune organ | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.37e-10 | 39 |
hematologic cancer | 8.01e-08 | 51 |
immune system cancer | 8.01e-08 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.