FFCP PHASE1:Hg19::chr8:143781405..143781425,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000860!1.82e-13!45;CL:0000066!8.98e-13!254;CL:0002057!3.65e-11!42;CL:0000076!5.89e-11!62;CL:0000548!2.18e-08!679;CL:0000004!2.18e-08!679;CL:0000255!2.18e-08!679;CL:0000012!4.37e-08!682;CL:0000063!8.33e-08!578;CL:0000071!1.47e-07!18;CL:0002546!1.47e-07!18;CL:0002194!6.81e-07!63;CL:0000576!6.81e-07!63;CL:0000040!6.81e-07!63;CL:0000559!6.81e-07!63 | |ontology_enrichment_celltype=CL:0000860!1.82e-13!45;CL:0000066!8.98e-13!254;CL:0002057!3.65e-11!42;CL:0000076!5.89e-11!62;CL:0000548!2.18e-08!679;CL:0000004!2.18e-08!679;CL:0000255!2.18e-08!679;CL:0000012!4.37e-08!682;CL:0000063!8.33e-08!578;CL:0000071!1.47e-07!18;CL:0002546!1.47e-07!18;CL:0002194!6.81e-07!63;CL:0000576!6.81e-07!63;CL:0000040!6.81e-07!63;CL:0000559!6.81e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.01e-24;33!CL:0002057;5.01e-24;33!CL:0000473;3.41e-15;39!CL:0000234;3.41e-15;39!CL:0000576;1.55e-10;48 | |ontology_enrichment_celltype_v019=CL:0000860;5.01e-24;33!CL:0002057;5.01e-24;33!CL:0000473;3.41e-15;39!CL:0000234;3.41e-15;39!CL:0000576;1.55e-10;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.69e-19,42;CL:0002057,3.69e-19,42;CL:0000473,4.40e-16,48;CL:0000234,4.40e-16,48;CL:0002194,8.19e-12,59;CL:0000576,8.19e-12,59;CL:0000040,8.19e-12,59;CL:0000559,8.19e-12,59;CL:0002009,2.88e-11,61;CL:0000839,4.75e-10,66;CL:0000557,7.89e-10,67;CL:0000066,1.30e-09,253;CL:0000766,8.06e-09,72;CL:0000076,6.28e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-14;42!UBERON:0008947;1.78e-11;29 | |ontology_enrichment_development_v019=CL:0002057;1.20e-14;42!UBERON:0008947;1.78e-11;29 | ||
|ontology_enrichment_disease=DOID:1749!2.89e-08!14 | |ontology_enrichment_disease=DOID:1749!2.89e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.51e-10;14 | |ontology_enrichment_disease_v019=DOID:1749;5.51e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,4.51e-11,106;DOID:1749,6.99e-10,14;DOID:0050687,1.22e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.37e-11!9;UBERON:0001557!4.14e-08!19;UBERON:0000467!7.67e-08!625;UBERON:0000480!9.58e-08!626;UBERON:0001986!1.47e-07!18;UBERON:0004638!1.47e-07!18;UBERON:0004852!1.47e-07!18;UBERON:0000468!2.35e-07!659;UBERON:0001004!3.76e-07!72;UBERON:0000923!5.62e-07!604;UBERON:0005291!5.62e-07!604;UBERON:0006598!5.62e-07!604;UBERON:0002532!5.62e-07!604;UBERON:0000926!5.65e-07!448;UBERON:0004120!5.65e-07!448;UBERON:0006603!5.65e-07!448;UBERON:0002050!6.93e-07!605;UBERON:0005423!6.93e-07!605;UBERON:0004119!7.77e-07!169;UBERON:0000925!7.77e-07!169;UBERON:0006595!7.77e-07!169 | |ontology_enrichment_uberon=UBERON:0001737!9.37e-11!9;UBERON:0001557!4.14e-08!19;UBERON:0000467!7.67e-08!625;UBERON:0000480!9.58e-08!626;UBERON:0001986!1.47e-07!18;UBERON:0004638!1.47e-07!18;UBERON:0004852!1.47e-07!18;UBERON:0000468!2.35e-07!659;UBERON:0001004!3.76e-07!72;UBERON:0000923!5.62e-07!604;UBERON:0005291!5.62e-07!604;UBERON:0006598!5.62e-07!604;UBERON:0002532!5.62e-07!604;UBERON:0000926!5.65e-07!448;UBERON:0004120!5.65e-07!448;UBERON:0006603!5.65e-07!448;UBERON:0002050!6.93e-07!605;UBERON:0005423!6.93e-07!605;UBERON:0004119!7.77e-07!169;UBERON:0000925!7.77e-07!169;UBERON:0006595!7.77e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.76e-25;9!UBERON:0001557;4.76e-25;9!UBERON:0000072;5.73e-09;37 | |ontology_enrichment_uberon_v019=UBERON:0001737;4.76e-25;9!UBERON:0001557;4.76e-25;9!UBERON:0000072;5.73e-09;37 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.02e-25,9;UBERON:0001557,9.08e-16,19;UBERON:0000072,1.27e-09,47;UBERON:0008947,1.48e-09,38;UBERON:0003258,1.48e-09,38;UBERON:0002371,4.22e-09,76;UBERON:0001474,4.45e-08,82;UBERON:0000065,6.83e-08,54;UBERON:0004765,8.72e-08,90;UBERON:0001434,3.09e-07,100 | |||
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| ||
|short_description=p5@LY6K | |short_description=p5@LY6K | ||
}} | }} |
Revision as of 04:56, 20 November 2012
Short description: | p5@LY6K |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LY6K_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -103bp_to_ENST00000292430, ENST00000561179, NM_001160354, NM_001160355, NM_017527, uc011ljv.1, uc011ljw.1, uc011ljx.1_5end |
EntrezGene: | LY6K |
HGNC: | 24225 |
UniProt: | Q17RY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.69e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.69e-19 | 42 |
defensive cell | 4.40e-16 | 48 |
phagocyte | 4.40e-16 | 48 |
monopoietic cell | 8.19e-12 | 59 |
monocyte | 8.19e-12 | 59 |
monoblast | 8.19e-12 | 59 |
promonocyte | 8.19e-12 | 59 |
macrophage dendritic cell progenitor | 2.88e-11 | 61 |
myeloid lineage restricted progenitor cell | 4.75e-10 | 66 |
granulocyte monocyte progenitor cell | 7.89e-10 | 67 |
epithelial cell | 1.30e-09 | 253 |
myeloid leukocyte | 8.06e-09 | 72 |
squamous epithelial cell | 6.28e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.02e-25 | 9 |
upper respiratory tract | 9.08e-16 | 19 |
segment of respiratory tract | 1.27e-09 | 47 |
respiratory primordium | 1.48e-09 | 38 |
endoderm of foregut | 1.48e-09 | 38 |
bone marrow | 4.22e-09 | 76 |
bone element | 4.45e-08 | 82 |
respiratory tract | 6.83e-08 | 54 |
skeletal element | 8.72e-08 | 90 |
skeletal system | 3.09e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.51e-11 | 106 |
squamous cell carcinoma | 6.99e-10 | 14 |
cell type cancer | 1.22e-08 | 143 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.